BAC Information

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BAC

Clone NameB6Ng01-074I13
Chromosome2 (Build37)
Map Location 91,583,908 - 91,750,395
singlet/doubletdoublet
Overlap geneD030051N19Rik
Upstream geneFnbp4, Rpl30-ps3, Agbl2, Mtch2, C1qtnf4, Ndufs3, Kbtbd4, Ptpmt1, Cugbp1, LOC279067, Rapsn, Psmc3, Slc39a13, Sfpi1, Mybpc3, Madd, Nr1h3, Acp2, Ddb2, Pacsin3, Zfp289, 1110051M20Rik, Lrp4, LOC619941, Ckap5, F2, Zfp408, Arhgap1, D2Ertd391e, LOC100043179, D230010M03Rik
Downstream geneChrm4, Mdk, Dgkz, Creb3l1, Phf21a, Gyltl1b, Pex16, 1700029I15Rik, Mapk8ip1, Cry2, Slc35c1, LOC100042775, LOC100043205, Chst1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074I13.bB6Ng01-074I13.g
ACCDH891355DH891356
length1,191961
definitionDH891355|Mus musculus domesticus DNA, BAC clone: B6Ng01-074I13, 5' end.DH891356|Mus musculus domesticus DNA, BAC clone: B6Ng01-074I13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,583,908 - 91,585,127)(91,749,433 - 91,750,395)
sequence
gaattcaaggccaacctgggctatatgagactgtctggaaaaaaagaata
gcacttgggaggcagaggcaggtggatcactgagtttgaggccaggacag
cagggctacaccattgccagacgtacagaatgacaacgtggttttggaga
atgagcttccttcttacgtgagacttcagccttgtccgtctgattgagga
tggcaagtgcagcatttcatatggcactttgggaatcaagaaaggaaatg
tgtagctttacggcattgaaacttcatatagaattgtaaccaggacagtt
agaaagaagctgatgtgagagattgtctttttgctctggtgagagtagca
ggaatcttcaaactacaacacttagtacttccttaagggaagttgctatt
gttcagtatggcagctaaaagttttggtgtacatagttgtgatcccttcc
ctagactgaaaagcctttgttttcagttctctgttccctgtcacctgcag
tagtgttttctatgtaatgtgcagtcttccaaaattaggataaatggaag
taagttcagtgaaagtcagcatatatcttgtctgtctctataagactatg
tatatagagaggcatgtgccaaacaatatttattaaaaatccctttgttg
acatgtgatcaaatagaaagaaggatctgagaaaggaagaaaactgattt
tgcagctttaaacttcagcttcaacatttgttggctattaaaacaatctc
taaccatatttcctttcctggtcctggcttttggaatgaccactctgaga
ataattagttcttattaaatgcctaggccataagctttggctcattccct
gattagctcttatttaaccatgtaaatcttttctttttattttaaaattt
ttctattttccatttatttaaaaaactattctatatctaccacttggcca
gttactctctctctcttcagtttcagccctctgctcatctactgggccgg
tctcttggtccagtccgctctccttgaaacccccttttgtcctctcacta
ttaaccagaatctctctctcctggccgggtccactcctatattctgcctg
aatctatgggcatcccattaatggacagggatgctcttaggcgctcatta
ctgtttggactagcaagacttccactgaacagtctgtaaat
gaattcttgacaagtcctggacttgggggctgtggtggggtggtccattc
agaaaggagaaggtccagaaagctccagcaatagggtgctcaatattgga
gcatctcatatatgttgaatatcccaaatgccttcaataggcttcttctt
ggagccaagaggcaataaaaataccaatatcagatatgctgcaagttcta
agtatcttttagaaacacactggtagagacagtgaacaagaggctggagg
ggacttactggagaaatgtgccatggacagctgtcagaaggatgaactca
gtcctcagaaagcagtcacttgtgcccaagtcctctcgggttgataagag
gccgagagagagaacagaagcacctcaacaaccttatgtacccgagatga
atggctggagagcctccatggccaggctcagcaggtcaagctgtagttca
ggtggactgtctgcagtgctctacctgctgtgttccccagggctaccaag
tcttatcaggcagcttctccccaagccagagggaagcagtgatcacttcc
ttttctacacagacttgtcaccaaaagctacagtcctacatgacaatgga
gatccctaaacacaaacagcttctggggattcagtactaataaagtacct
agctagcatgcataacgccccaggttaaatctttaccaacacagacacag
actatcttgctttggaagagtcctccctagccaggcagaatggtaactaa
ctatactgctagcaacgtgggagataaaggtagaaagattgagaattcca
ggctagtctaggctatatgaaactgtatcacaaaataaatgaagagaaaa
ttaaagatccttctctgatgaagtattgccttgtaacagacactggctga
gaacactagtgatggctgtaggaacaagaagtgggaatggggttgtttta
tgtttttgttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_91583908_91585127
seq2: B6Ng01-074I13.b_46_1236

seq1  GAATTCAAGGCCAACCTGGGCTATATGAGACTGTCTGGAAAAAAAGAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGCCAACCTGGGCTATATGAGACTGTCTGGAAAAAAAGAATA  50

seq1  GCACTTGGGAGGCAGAGGCAGGTGGATCACTGAGTTTGAGGCCAGGACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTGGGAGGCAGAGGCAGGTGGATCACTGAGTTTGAGGCCAGGACAG  100

seq1  CAGGGCTACACCATTGCCAGACGTACAGAATGACAACGTGGTTTTGGAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCTACACCATTGCCAGACGTACAGAATGACAACGTGGTTTTGGAGA  150

seq1  ATGAGCTTCCTTCTTACGTGAGACTTCAGCCTTGTCCGTCTGATTGAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCTTCCTTCTTACGTGAGACTTCAGCCTTGTCCGTCTGATTGAGGA  200

seq1  TGGCAAGTGCAGCATTTCATATGGCACTTTGGGAATCAAGAAAGGAAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAAGTGCAGCATTTCATATGGCACTTTGGGAATCAAGAAAGGAAATG  250

seq1  TGTAGCTTTACGGCATTGAAACTTCATATAGAATTGTAACCAGGACAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCTTTACGGCATTGAAACTTCATATAGAATTGTAACCAGGACAGTT  300

seq1  AGAAAGAAGCTGATGTGAGAGATTGTCTTTTTGCTCTGGTGAGAGTAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAAGCTGATGTGAGAGATTGTCTTTTTGCTCTGGTGAGAGTAGCA  350

seq1  GGAATCTTCAAACTACAACACTTAGTACTTCCTTAAGGGAAGTTGCTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATCTTCAAACTACAACACTTAGTACTTCCTTAAGGGAAGTTGCTATT  400

seq1  GTTCAGTATGGCAGCTAAAAGTTTTGGTGTACATAGTTGTGATCCCTTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGTATGGCAGCTAAAAGTTTTGGTGTACATAGTTGTGATCCCTTCC  450

seq1  CTAGACTGAAAAGCCTTTGTTTTCAGTTCTCTGTTCCCTGTCACCTGCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGACTGAAAAGCCTTTGTTTTCAGTTCTCTGTTCCCTGTCACCTGCAG  500

seq1  TAGTGTTTTCTATGTAATGTGCAGTCTTCCAAAATTAGGATAAATGGAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTTTTCTATGTAATGTGCAGTCTTCCAAAATTAGGATAAATGGAAG  550

seq1  TAAGTTCAGTGAAAGTCAGCATATATCTTGTCTGTCTCTATAAGACTATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTCAGTGAAAGTCAGCATATATCTTGTCTGTCTCTATAAGACTATG  600

seq1  TATATAGAGAGGCATGTGCCAAACAATATTTATTAAAAATCCCTTTGTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAGAGAGGCATGTGCCAAACAATATTTATTAAAAATCCCTTTGTTG  650

seq1  ACATGTGATCAAATAGAAAGAAGGATCTGAGAAAGGAAGAAAACTGATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTGATCAAATAGAAAGAAGGATCTGAGAAAGGAAGAAAACTGATTT  700

seq1  TGCAGCTTTAAACTTCAGCTTCAACATTTGTTGGCTATTAAAACAATCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCTTTAAACTTCAGCTTCAACATTTGTTGGCTATTAAAACAATCTC  750

seq1  TAACCATATTTCCTTTCCTGGTCCTGGCTTTTGGAATGACCACTCTGAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCATATTTCCTTTCCTGGTCCTGGCTTTTGGAATGACCACTCTGAGA  800

seq1  ATAATTAGTTCTTATTAAATGCCTAGGCCATAAGCTTTGGCTCATTCCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTAGTTCTTATTAAATGCCTAGGCCATAAGCTTTGGCTCATTCCCT  850

seq1  GATTAGCTCTTATTTAACCATGTAAATCTTTTCTTTTTATTTTAAAATTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAGCTCTTATTTAACCATGTAAATCTTTTCTTTTTATTTTAAAATTT  900

seq1  TTTCATATTTCCATTTATTTAAAAAACTATTCTATATCTACCACTTGGCC  950
      ||  || |||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAT-TTTCCATTTATTTAAAAAACTATTCTATATCTACCACTTGGCC  949

seq1  AGTTACCTCTCTCTCTCTTCAGTTCCAGCCCTCTTCCTTCATCTACCTGG  1000
      ||||| |||||||||||||||||| ||||||||| |  ||||||||  ||
seq2  AGTTA-CTCTCTCTCTCTTCAGTTTCAGCCCTCTGC--TCATCTACTGGG  996

seq1  CCCGTCTCCTTGGTCCAGTTCGGCTCTTCCTTGAAATCCCCCTTTTGTCC  1050
      || |||| |||||||||| || |||| ||||||||| |||||||||||||
seq2  CCGGTCT-CTTGGTCCAG-TCCGCTC-TCCTTGAAA-CCCCCTTTTGTCC  1042

seq1  TCTCACTATTACCCAGAATTCTCTCTCTCCTGCCCGTGTCCCACCTCCTA  1100
      ||||||||||| |||||| ||||||||||||| ||| ||||   ||||||
seq2  TCTCACTATTAACCAGAA-TCTCTCTCTCCTGGCCGGGTCC--ACTCCTA  1089

seq1  TTTCCTGCCTGAGCTCATTGGCCATCCCCCTTTTATTGACAGGTGATGCT  1150
      | | ||||||||  ||  ||| |||  ||| || || |||||| ||||||
seq2  TATTCTGCCTGA-ATCTATGGGCAT--CCCATTAATGGACAGG-GATGCT  1135

seq1  TCTAAGAGTCTCTCTCCAATTAGCTGTTTGACCATAGGCAAGTAACTTCA  1200
        || |     | |||  |||| |||||||  | || |||||  ||||| 
seq2  CTTAGG-----CGCTC--ATTA-CTGTTTGGAC-TA-GCAAG--ACTTC-  1172

seq1  CACTGAGACAGTCTGTAAAT  1220
      |||||| |||||||||||||
seq2  CACTGA-ACAGTCTGTAAAT  1191

seq1: chr2_91749433_91750395
seq2: B6Ng01-074I13.g_70_1030 (reverse)

seq1  AAACAAAAAACATAAAACAACCCCCTTTCCCACTTCTTGTTCCTACAGCC  50
      |||| ||||||||||||||| |||| ||||||||||||||||||||||||
seq2  AAAC-AAAAACATAAAACAA-CCCCATTCCCACTTCTTGTTCCTACAGCC  48

seq1  ATCACTAGTGTTCTCAGCCAGTGTCTGTTACAAGGCAATACTTCATCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTAGTGTTCTCAGCCAGTGTCTGTTACAAGGCAATACTTCATCAGA  98

seq1  GAAGGATCTTTAATTTTCTCTTCATTTATTTTGTGATACAGTTTCATATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGATCTTTAATTTTCTCTTCATTTATTTTGTGATACAGTTTCATATA  148

seq1  GCCTAGACTAGCCTGGAATTCTCAATCTTTCTACCTTTATCTCCCACGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAGACTAGCCTGGAATTCTCAATCTTTCTACCTTTATCTCCCACGTT  198

seq1  GCTAGCAGTATAGTTAGTTACCATTCTGCCTGGCTAGGGAGGACTCTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGCAGTATAGTTAGTTACCATTCTGCCTGGCTAGGGAGGACTCTTCC  248

seq1  AAAGCAAGATAGTCTGTGTCTGTGTTGGTAAAGATTTAACCTGGGGCGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAAGATAGTCTGTGTCTGTGTTGGTAAAGATTTAACCTGGGGCGTT  298

seq1  ATGCATGCTAGCTAGGTACTTTATTAGTACTGAATCCCCAGAAGCTGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATGCTAGCTAGGTACTTTATTAGTACTGAATCCCCAGAAGCTGTTT  348

seq1  GTGTTTAGGGATCTCCATTGTCATGTAGGACTGTAGCTTTTGGTGACAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTAGGGATCTCCATTGTCATGTAGGACTGTAGCTTTTGGTGACAAG  398

seq1  TCTGTGTAGAAAAGGAAGTGATCACTGCTTCCCTCTGGCTTGGGGAGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTAGAAAAGGAAGTGATCACTGCTTCCCTCTGGCTTGGGGAGAAG  448

seq1  CTGCCTGATAAGACTTGGTAGCCCTGGGGAACACAGCAGGTAGAGCACTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTGATAAGACTTGGTAGCCCTGGGGAACACAGCAGGTAGAGCACTG  498

seq1  CAGACAGTCCACCTGAACTACAGCTTGACCTGCTGAGCCTGGCCATGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAGTCCACCTGAACTACAGCTTGACCTGCTGAGCCTGGCCATGGAG  548

seq1  GCTCTCCAGCCATTCATCTCGGGTACATAAGGTTGTTGAGGTGCTTCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCCAGCCATTCATCTCGGGTACATAAGGTTGTTGAGGTGCTTCTGT  598

seq1  TCTCTCTCTCGGCCTCTTATCAACCCGAGAGGACTTGGGCACAAGTGACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCGGCCTCTTATCAACCCGAGAGGACTTGGGCACAAGTGACT  648

seq1  GCTTTCTGAGGACTGAGTTCATCCTTCTGACAGCTGTCCATGGCACATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCTGAGGACTGAGTTCATCCTTCTGACAGCTGTCCATGGCACATTT  698

seq1  CTCCAGTAAGTCCCCTCCAGCCTCTTGTTCACTGTCTCTACCAGTGTGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGTAAGTCCCCTCCAGCCTCTTGTTCACTGTCTCTACCAGTGTGTT  748

seq1  TCTAAAAGATACTTAGAACTTGCAGCATATCTGATATTGGTATTTTTATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAAGATACTTAGAACTTGCAGCATATCTGATATTGGTATTTTTATT  798

seq1  GCCTCTTGGCTCCAAGAAGAAGCCTATTGAAGGCATTTGGGATATTCAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTTGGCTCCAAGAAGAAGCCTATTGAAGGCATTTGGGATATTCAAC  848

seq1  ATATATGAGATGCTCCAATATTGAGCACCCTATTGCTGGAGCTTTCTGGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATGAGATGCTCCAATATTGAGCACCCTATTGCTGGAGCTTTCTGGA  898

seq1  CCTTCTCCTTTCTGAATGGACCACCCCACCACAGCCCCCAAGTCCAGGAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTCCTTTCTGAATGGACCACCCCACCACAGCCCCCAAGTCCAGGAC  948

seq1  TTGTCAAGAATTC  963
      |||||||||||||
seq2  TTGTCAAGAATTC  961