BAC Information

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BAC

Clone NameB6Ng01-075H07
Chromosome2 (Build37)
Map Location 53,066,586 - 53,067,708
singlet/doubletsinglet
Overlap geneArl6ip6
Upstream geneNeb, LOC100041670, Arl5a, Cacnb4, OTTMUSG00000012638, Stam2, Fmnl2, Prpf40a
Downstream geneLOC666872, LOC666876, LOC207933, Rprm
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075H07.bB6Ng01-075H07.g
ACCDH892011DH892012
length1,1211,160
definitionDH892011|Mus musculus domesticus DNA, BAC clone: B6Ng01-075H07, 5' end.DH892012|Mus musculus domesticus DNA, BAC clone: B6Ng01-075H07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaagtgtactagacatttctgaatttcaggttttaagctgataaa
agggtatgtgaagagaagtacatctttcagtagaaaggtgactcagcagg
taaaggtgtttcctgccagcctggtggcctgagattgatcctctggaagg
agaaaatccctcacaggctgtcctctaccttgacttttataccatgtcat
gcatttcttcccccaagtaaatgtaactttaaaattttacgattttgata
tatcatatatttgaatctaaagcttagattgttgaataacttactaagaa
attgattttatatgaaatatttcctaagtaatactaaagaagtgacatgc
tgtggtgtggagactacttcagctcttggaaataaatctttagccacctt
ctctagtaacagctcagcatgaatctcacaacgaaaaatgagcctatttg
acaatgcttacttgctttatgaagaattatttagggttcacaagactaag
gcaggagtcctgccatcgttcaaagctagtttgggttacataacaaattt
gaagggagcctggaactagagatcctaatatctcttccttgtgcagttta
atagccttaactctttgtttgcaatatgaaaatttattaaaaggcagaga
cttcaaatgttcctaggttacttttttaagtccgtgcttatgtcatcctt
caaatcttgaagccatttgaagttactcagccaagaaaaggtattgtaac
ttgactcagagtatttatgcctcagatgcatcttaaatttatttcccaga
atgaggcaaatcggaacacatacactcactttatagaaatcagcataaat
ccaggcctatatttttagaaatttggtgcttttcacgtgtattactggtt
gctttattgcttatttttggtatgacattaatagtcaaacaaaccttaca
gttatcagattaacaatttctaaaactgataatgttagagaatgatatga
tcttcccacaaccctgttttaaagaacagtctacagaattagatgggcca
tctgtagtatttcagtttgagatacaaacgagtgagtagaatagctgctg
attttctaacattgtggcctt
gaattctcacctgaggaatatcgaatggctgaaaagcacttgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcaaggatgtgaagaaagaggaacactcctccattgttggtg
ggattgcaggcttttacaaccactctggaaatcagtctggcagttcctca
gaaaattggacgtagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgtcccaatcggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccaaat
gcccctcaagagaggaatggatacagaaaatatggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacatattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccagaaac
ctaggatacccaagatataagatacaatttgctaaatgcatgaaactgaa
gaagaacaaagaccaaagtatagacactttgtcccttcttagaattggga
acaaaacacccatggaaggagttacagagacaaagtttggagctgtgacg
aaaggatttaccatctagagactaccatatccggggatccatcccataat
cagcttccaaaagctgacaccattgcatacaccagcaagatttttgctga
aaggacccagatagagctgtgtcttttgagactaagccgggccctagcaa
acacataagtggatgttcactgtcagctattggatggatcacagggctcc
cgatggaggagctagagacgtacccaggaactaaagggatctgcacccta
atagtggaacacatatgaactaccagtacctgagctctgactctagctgc
atgtgtatcaagatgctagtcgcatcactggaaggagagcccattgactg
cacttattgctcagtacaggtaccaggccaaagtgtggattggtgtggtg
agggcatgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_53066586_53067708
seq2: B6Ng01-075H07.b_47_1167

seq1  GAATTCAAGTGTACTAGACATTTCTGAATTTCAGGTTTTAAGCTGATAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGTGTACTAGACATTTCTGAATTTCAGGTTTTAAGCTGATAAA  50

seq1  AGGGTATGTGAAGAGAAGTACATCTTTCAGTAGAAAGGTGACTCAGCAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTATGTGAAGAGAAGTACATCTTTCAGTAGAAAGGTGACTCAGCAGG  100

seq1  TAAAGGTGTTTCCTGCCAGCCTGGTGGCCTGAGATTGATCCTCTGGAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGTGTTTCCTGCCAGCCTGGTGGCCTGAGATTGATCCTCTGGAAGG  150

seq1  AGAAAATCCCTCACAGGCTGTCCTCTACCTTGACTTTTATACCATGTCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATCCCTCACAGGCTGTCCTCTACCTTGACTTTTATACCATGTCAT  200

seq1  GCATTTCTTCCCCCAAGTAAATGTAACTTTAAAATTTTACGATTTTGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTCTTCCCCCAAGTAAATGTAACTTTAAAATTTTACGATTTTGATA  250

seq1  TATCATATATTTGAATCTAAAGCTTAGATTGTTGAATAACTTACTAAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATATATTTGAATCTAAAGCTTAGATTGTTGAATAACTTACTAAGAA  300

seq1  ATTGATTTTATATGAAATATTTCCTAAGTAATACTAAAGAAGTGACATGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATTTTATATGAAATATTTCCTAAGTAATACTAAAGAAGTGACATGC  350

seq1  TGTGGTGTGGAGACTACTTCAGCTCTTGGAAATAAATCTTTAGCCACCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTGTGGAGACTACTTCAGCTCTTGGAAATAAATCTTTAGCCACCTT  400

seq1  CTCTAGTAACAGCTCAGCATGAATCTCACAACGAAAAATGAGCCTATTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGTAACAGCTCAGCATGAATCTCACAACGAAAAATGAGCCTATTTG  450

seq1  ACAATGCTTACTTGCTTTATGAAGAATTATTTAGGGTTCACAAGACTAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGCTTACTTGCTTTATGAAGAATTATTTAGGGTTCACAAGACTAAG  500

seq1  GCAGGAGTCCTGCCATCGTTCAAAGCTAGTTTGGGTTACATAACAAATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAGTCCTGCCATCGTTCAAAGCTAGTTTGGGTTACATAACAAATTT  550

seq1  GAAGGGAGCCTGGAACTAGAGATCCTAATATCTCTTCCTTGTGCAGTTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGAGCCTGGAACTAGAGATCCTAATATCTCTTCCTTGTGCAGTTTA  600

seq1  ATAGCCTTAACTCTTTGTTTGCAATATGAAAATTTATTAAAAGGCAGAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCCTTAACTCTTTGTTTGCAATATGAAAATTTATTAAAAGGCAGAGA  650

seq1  CTTCAAATGTTCCTAGGTTACTTTTTTAAGTCCGTGCTTATGTCATCCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAATGTTCCTAGGTTACTTTTTTAAGTCCGTGCTTATGTCATCCTT  700

seq1  CAAATCTTGAAGCCATTTGAAGTTACTCAGCCAAGAAAAGGTATTGTAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCTTGAAGCCATTTGAAGTTACTCAGCCAAGAAAAGGTATTGTAAC  750

seq1  TTGACTCAGAGTATTTATGCCTCAGATGCATCTTAAATTTATTTCCCAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTCAGAGTATTTATGCCTCAGATGCATCTTAAATTTATTTCCCAGA  800

seq1  ATGAGGCAAATCGGAACACATACACTCACTTTATAGAAATCAGCATAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGCAAATCGGAACACATACACTCACTTTATAGAAATCAGCATAAAT  850

seq1  CCAGGCCTATATTTTTAGAAATTTGGTGCTTTTCAGGTGTATTACTGGTT  900
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CCAGGCCTATATTTTTAGAAATTTGGTGCTTTTCACGTGTATTACTGGTT  900

seq1  GCTTTATTGCTTATTTTTGGTATGACATTAATAGTCAAAACAAACCTTAC  950
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GCTTTATTGCTTATTTTTGGTATGACATTAATAGTC-AAACAAACCTTAC  949

seq1  AGTTATCAGATTAACAATTTCTAAAACTGATAAGGTTAGAGAATGATATG  1000
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AGTTATCAGATTAACAATTTCTAAAACTGATAATGTTAGAGAATGATATG  999

seq1  ATCTTCCCACAAACCTGTTTTAAAGAACAGTCTACAGAATTAGATGGCCA  1050
      |||||||||||| |||||||||||||||||||||||||||||||||| | 
seq2  ATCTTCCCACAACCCTGTTTTAAAGAACAGTCTACAGAATTAGATGGGCC  1049

seq1  ATCTGTAGTATTTCAGTTTTGAGATACAAACGAGTGAGTAGAATAGCTGC  1100
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ATCTGTAGTATTTCAG-TTTGAGATACAAACGAGTGAGTAGAATAGCTGC  1098

seq1  TGATTTTCTAACATTGTTGCCTT  1123
      ||||||||||||||||| |||||
seq2  TGATTTTCTAACATTGTGGCCTT  1121