BAC Information

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BAC

Clone NameB6Ng01-075O15
Chromosome2 (Build37)
Map Location 131,593,720 - 131,736,219
singlet/doubletdoublet
Overlap geneLamr1-ps1, Prnp
Upstream gene4930402H24Rik, LOC100043766, C030014O09Rik, LOC627316, Atrn, LOC100043768, Gfra4, Adam33, Siglec1, LOC100043457, Hspa12b, 1700037H04Rik, Spef1, Cenpb, Cdc25b, 2310035K24Rik, D430028G21Rik, Pank2, Rnf24, LOC100043463, Smox, Adra1d
Downstream genePrnd, Rassf2, Slc23a2, LOC626513, LOC100043470, EG329521, 5730494N06Rik, Pcna, Cds2, Prokr2, 1700026D11Rik, Prei4, LOC100043781, LOC383801, LOC668906, Chgb, 3300001M20Rik, Mcm8, Crls1, B430119L13Rik, 5830467P10Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075O15.bB6Ng01-075O15.g
ACCDH892337DH892338
length1,143645
definitionDH892337|Mus musculus domesticus DNA, BAC clone: B6Ng01-075O15, 5' end.DH892338|Mus musculus domesticus DNA, BAC clone: B6Ng01-075O15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(131,593,720 - 131,594,849)(131,735,575 - 131,736,219)
sequence
gaattctctttatcacgttggtctgtggaggtatctgagagggatggtct
tgcctgtcttaattgatgtaagagagcccaacacttccaggacatcccta
gtcagtgggtctaggctatgcaaggataacaggcagatgagattgtccac
tgtactgtttctttcttcagattcgcaagcattacttggcagtgtaagaa
ctctgtaacattccggaaggtagtggcacacacctttaatctcagcactc
cagaggcaaaggcagacagatctctgtaagattgaatccagcctggtcta
cagagtgagcccaggacagccagagctaaaacagagaaagcctgattcaa
acaaaacaaagcaaaacaaaaccaaacctttgaaacactaacacaattaa
tttatggggtcatggttgaagtgtgtgcagctaaacatgagcaagtggat
cagctggcaagtgtcgttctccatggttcctttcctgcttccttggctgt
gatgcgattcctgttttcaggttcctgccttgagttcctgctagcttccc
tcagtgatggactgtggcctggaagtgtaagatgaaagaaaccctttcct
ccccatttgcttttggtcagagtgtcatattacagcaacagaatgaaact
agaacaggtgagccatgtcttcatcataggtaggagatgtggcagaagac
tgtgcctctgatccagcactcagacaagataggagatctaagagcaagga
cactggggcgcccctgaactcctgcttggacaaagcagacctgtatttct
ttttcttgggctatctgaccttttactttaacaatattgcttacaaaata
tgcacatctttttatgattgcatacaaaagggcaagaagaaaaagcacac
taccaaagaagcattatttagacatgacacaaatattaaagctatcagac
agaatctgaacatgacagtgtgcagtacattaaggcctcttaatggaaaa
gttggatttcaagcaaaatcagatagaacttttcagcctggatgggaaac
atgaggattaaaacaaattgaagaaactggctacaaaggcctagccacaa
aagatggaaattctgtgccttcctcgggtgtgctcaattcata
gaattctgcgcacccgcaactgctattaaaccacggtattcaaagtacaa
gaaaatagacaatcatgaaaacgcctagacagggcagtgaaggcgcacgg
cgacgttgagaatgaaactgtgcaagggagtaatgactgtggtggaataa
cgaggtaaaattatgttcgctgtagctactacaaagagagaagaaaacag
ccaaggacagtcaaaagatgccacccccatccccagcgatgctgagctgt
gaatctggctcgggaaggaaaggctggctcccggcctggctgccctggga
ttcggttcctccaggagtcgcgcagcagggggtgtacagtcacctcccag
ccagactcagccccagtcccagtcccagtcctagtccccgtggcctcaag
gccccgagaggcgcagtgagccgagcttgacgacggaaggctgagtgctc
gccaaggcctggcttcagcagcccgcttacctgccaccgatgcgacgcag
cgcccagaatcggtctgctgatccgacaacgcgggggagccgggagtgga
aaggggcggggcaggcgggagctaggctgggcgaggggcggggcgtgatg
ctcaccaatggccgcgccgcgtctctcgcgggggggtggggggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_131593720_131594849
seq2: B6Ng01-075O15.b_47_1189

seq1  GAATTCTCTTTATCACGTTGGTCTGTGGAGGTATCTGAGAGGGATGGTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTTATCACGTTGGTCTGTGGAGGTATCTGAGAGGGATGGTCT  50

seq1  TGCCTGTCTTAATTGATGTAAGAGAGCCCAACACTTCCAGGACATCCCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGTCTTAATTGATGTAAGAGAGCCCAACACTTCCAGGACATCCCTA  100

seq1  GTCAGTGGGTCTAGGCTATGCAAGGATAACAGGCAGATGAGATTGTCCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGTGGGTCTAGGCTATGCAAGGATAACAGGCAGATGAGATTGTCCAC  150

seq1  TGTACTGTTTCTTTCTTCAGATTCGCAAGCATTACTTGGCAGTGTAAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTGTTTCTTTCTTCAGATTCGCAAGCATTACTTGGCAGTGTAAGAA  200

seq1  CTCTGTAACATTCCGGAAGGTAGTGGCACACACCTTTAATCTCAGCACTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTAACATTCCGGAAGGTAGTGGCACACACCTTTAATCTCAGCACTC  250

seq1  CAGAGGCAAAGGCAGACAGATCTCTGTAAGATTGAATCCAGCCTGGTCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGCAAAGGCAGACAGATCTCTGTAAGATTGAATCCAGCCTGGTCTA  300

seq1  CAGAGTGAGCCCAGGACAGCCAGAGCTAAAACAGAGAAAGCCTGATTCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTGAGCCCAGGACAGCCAGAGCTAAAACAGAGAAAGCCTGATTCAA  350

seq1  ACAAAACAAAGCAAAACAAAACCAAACCTTTGAAACACTAACACAATTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACAAAGCAAAACAAAACCAAACCTTTGAAACACTAACACAATTAA  400

seq1  TTTATGGGGTCATGGTTGAAGTGTGTGCAGCTAAACATGAGCAAGTGGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGGGGTCATGGTTGAAGTGTGTGCAGCTAAACATGAGCAAGTGGAT  450

seq1  CAGCTGGCAAGTGTCGTTCTCCATGGTTCCTTTCCTGCTTCCTTGGCTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGGCAAGTGTCGTTCTCCATGGTTCCTTTCCTGCTTCCTTGGCTGT  500

seq1  GATGCGATTCCTGTTTTCAGGTTCCTGCCTTGAGTTCCTGCTAGCTTCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCGATTCCTGTTTTCAGGTTCCTGCCTTGAGTTCCTGCTAGCTTCCC  550

seq1  TCAGTGATGGACTGTGGCCTGGAAGTGTAAGATGAAAGAAACCCTTTCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGATGGACTGTGGCCTGGAAGTGTAAGATGAAAGAAACCCTTTCCT  600

seq1  CCCCATTTGCTTTTGGTCAGAGTGTCATATTACAGCAACAGAATGAAACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATTTGCTTTTGGTCAGAGTGTCATATTACAGCAACAGAATGAAACT  650

seq1  AGAACAGGTGAGCCATGTCTTCATCATAGGTAGGAGATGTGGCAGAAGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAGGTGAGCCATGTCTTCATCATAGGTAGGAGATGTGGCAGAAGAC  700

seq1  TGTGCCTCTGATCCAGCACTCAGACAAGATAGGAGATCTAAGAGCAAGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCTCTGATCCAGCACTCAGACAAGATAGGAGATCTAAGAGCAAGGA  750

seq1  CACT-GGGCGCCCCTGAACTCCTGCTTGGACAAAGCAGACCTGTATTTCT  799
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGGGCGCCCCTGAACTCCTGCTTGGACAAAGCAGACCTGTATTTCT  800

seq1  TTTTCTT-GGCTATCTGACCTTTTACTTTAACAATATTGCTTACAAAATA  848
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTGGGCTATCTGACCTTTTACTTTAACAATATTGCTTACAAAATA  850

seq1  TGCACATCTTTTTATGA-TGCATACAAAA-GGCAAGAAGAAAAAGCACAC  896
      ||||||||||||||||| ||||||||||| ||||||||||||||||||||
seq2  TGCACATCTTTTTATGATTGCATACAAAAGGGCAAGAAGAAAAAGCACAC  900

seq1  TACC-AAGAAGCATTA-TTAGACATGACACAAATATTAAAGCTATCAGAC  944
      |||| ||||||||||| |||||||||||||||||||||||||||||||||
seq2  TACCAAAGAAGCATTATTTAGACATGACACAAATATTAAAGCTATCAGAC  950

seq1  AGAATCTG-ACATGACAGTGTGCAGTACATTAAGGCCTC-TAATGGAAAA  992
      |||||||| |||||||||||||||||||||||||||||| ||||||||||
seq2  AGAATCTGAACATGACAGTGTGCAGTACATTAAGGCCTCTTAATGGAAAA  1000

seq1  GTTGGATTTCAAGCAAAATCAGATAAGAACTTTCCAGCCT-GAT-GGAAA  1040
      |||||||||||||||||||||||| |||||||| |||||| ||| |||||
seq2  GTTGGATTTCAAGCAAAATCAGAT-AGAACTTTTCAGCCTGGATGGGAAA  1049

seq1  CATGAAGA-TAAAACAAA-TGGAGACACTGGCTACAAAAGCCTAGCAAC-  1087
      ||||| || ||||||||| || ||| |||||||||||| ||||||| || 
seq2  CATGAGGATTAAAACAAATTGAAGAAACTGGCTACAAAGGCCTAGCCACA  1099

seq1  AAAGATGAGAAATCCTGTG-CTTCCTC-GGTGTGCTCAATTCATA  1130
      ||||||| ||||| ||||| ||||||| |||||||||||||||||
seq2  AAAGATG-GAAATTCTGTGCCTTCCTCGGGTGTGCTCAATTCATA  1143

seq1: chr2_131735575_131736219
seq2: B6Ng01-075O15.g_69_713 (reverse)

seq1  CACCCCCCACCCCCCCGCGAGAGACGCGGCGCGGCCATTGGTGAGCATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCCCACCCCCCCGCGAGAGACGCGGCGCGGCCATTGGTGAGCATCA  50

seq1  CGCCCCGCCCCTCGCCCAGCCTAGCTCCCGCCTGCCCCGCCCCTTTCCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCCCGCCCCTCGCCCAGCCTAGCTCCCGCCTGCCCCGCCCCTTTCCAC  100

seq1  TCCCGGCTCCCCCGCGTTGTCGGATCAGCAGACCGATTCTGGGCGCTGCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGGCTCCCCCGCGTTGTCGGATCAGCAGACCGATTCTGGGCGCTGCG  150

seq1  TCGCATCGGTGGCAGGTAAGCGGGCTGCTGAAGCCAGGCCTTGGCGAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCATCGGTGGCAGGTAAGCGGGCTGCTGAAGCCAGGCCTTGGCGAGCA  200

seq1  CTCAGCCTTCCGTCGTCAAGCTCGGCTCACTGCGCCTCTCGGGGCCTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCCTTCCGTCGTCAAGCTCGGCTCACTGCGCCTCTCGGGGCCTTGA  250

seq1  GGCCACGGGGACTAGGACTGGGACTGGGACTGGGGCTGAGTCTGGCTGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCACGGGGACTAGGACTGGGACTGGGACTGGGGCTGAGTCTGGCTGGG  300

seq1  AGGTGACTGTACACCCCCTGCTGCGCGACTCCTGGAGGAACCGAATCCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGACTGTACACCCCCTGCTGCGCGACTCCTGGAGGAACCGAATCCCA  350

seq1  GGGCAGCCAGGCCGGGAGCCAGCCTTTCCTTCCCGAGCCAGATTCACAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGCCAGGCCGGGAGCCAGCCTTTCCTTCCCGAGCCAGATTCACAGC  400

seq1  TCAGCATCGCTGGGGATGGGGGTGGCATCTTTTGACTGTCCTTGGCTGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCATCGCTGGGGATGGGGGTGGCATCTTTTGACTGTCCTTGGCTGTT  450

seq1  TTCTTCTCTCTTTGTAGTAGCTACAGCGAACATAATTTTACCTCGTTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTCTCTTTGTAGTAGCTACAGCGAACATAATTTTACCTCGTTATT  500

seq1  CCACCACAGTCATTACTCCCTTGCACAGTTTCATTCTCAACGTCGCCGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCACAGTCATTACTCCCTTGCACAGTTTCATTCTCAACGTCGCCGTG  550

seq1  CGCCTTCACTGCCCTGTCTAGGCGTTTTCATGATTGTCTATTTTCTTGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCTTCACTGCCCTGTCTAGGCGTTTTCATGATTGTCTATTTTCTTGTA  600

seq1  CTTTGAATACCGTGGTTTAATAGCAGTTGCGGGTGCGCAGAATTC  645
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAATACCGTGGTTTAATAGCAGTTGCGGGTGCGCAGAATTC  645