BAC Information

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BAC

Clone NameB6Ng01-076K06
Chromosome2 (Build37)
Map Location 160,324,245 - 160,467,752
singlet/doubletdoublet
Overlap geneLOC100043892
Upstream geneLOC100043689, Gm826, Mafb
Downstream geneTop1, Plcg1, Zhx3, Lpin3, Emilin3, Chd6, LOC100043693, LOC100043694, LOC383769, LOC629655, LOC383770, Ptprt
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-076K06.bB6Ng01-076K06.g
ACCDH892851DH892852
length842886
definitionDH892851|Mus musculus domesticus DNA, BAC clone: B6Ng01-076K06, 5' end.DH892852|Mus musculus domesticus DNA, BAC clone: B6Ng01-076K06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(160,324,245 - 160,325,087)(160,466,869 - 160,467,752)
sequence
gaattctatcagtaatgccccaagtaagctattctttcatgcagtgtata
cttggaaagtgcctaatgtgtgcctggctaggctgcagtgccaatggtgg
agcatgacctaatgtcttctggctccaggagagaagggaagtggagaatg
gagggcaaccaacatctaaggaagggttccctctgcatcagcctcaagtt
ctgcagtttcctgtgtgtctggtcgttctgttctcacatagtgcaggacg
tgctaaagaagataattcctatcttactgcacttcggggagggatcctca
cacttccaggaagtggggccactgggatttggacctgtacatgcaaggct
tttatccccacatctgttccctcttccatacactcttatgaactgaatca
aataatcagaagctaaatctttatttgatagctgtgagaacagaagccca
agaagagtcattgacaataatgatagagtcaacttctcttaaggatttca
tttaaggcacactccatgcccttctccatagtctggctgagctcttccag
aatgctttctccttccttcctccaccatatatgaccgtctttaactgaga
ccaagtctagaccagctgctatgtgtcctcatcaagcaggaaagaaacat
cttcacgacacctgcctgactctttggggcagttttttccccccatgtga
tactttgcattaaggaaattgtgattaaaacatcttttacaaactgcatt
aattcctaggccaagataaaaattccatttgacacaaatagattttccat
ggtgagttagcactgcattgagggtatgggcggggggagggg
gaattctgcctcattgcaatgtgagatacctttgtggtacacttaaatac
attgctccttttgcttctgaaagctatgttgggtcatgtgactgatgttc
aacttccatctggtttcaagccagggaatctcaaggccttggctatactt
ttgttccactctgggattttcatggttcaggacccagatatccctcctaa
cagtttttaaaatatatttgtttttactagctttgtaagtttgttttttg
tttgttttttcgagacagggtttctctgtatggctctggctgtcctggaa
ctcactttgtagaccaggctggcctcgaactcagaaatccgcctgcctct
gcctcctgagtgctgggattaaaggcgtgcgccaccacacccggctactt
tgtaacttttactttgtaactttgagatagggtttcatgaagcccaggtt
gggcttgaactcattatatagctgaggccaaacttgaactctggatcatt
tgccctgaatctcctaagtgctggatttactactggcatgcactcctagt
ggtctcctagtcttggcttcactgctttcctgactacagttttctggcag
ttttccccttgccataatgccttgcctagagatctaatgccctgttaaga
gttggacactctcaaaatagaacctgcttggtgatccatggaaaacgttc
atgctgtttgatcccagcaaccagaaatgtcctgctgccttttgctgcta
cagcagctgctcagcaaaagttgaaaattgtctgaataaaaggaaaggcc
ggtgggaaagacccaagccttgaatagcagaatgagtagctgagatttag
gagcctgccgtgtggctgggggttgggggggtggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_160324245_160325087
seq2: B6Ng01-076K06.b_46_887

seq1  GAATTCTATCAGTAATGCCCCAAGTAAGCTATTCTTTCATGCAGTGTATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATCAGTAATGCCCCAAGTAAGCTATTCTTTCATGCAGTGTATA  50

seq1  CTTGGAAAGTGCCTAATGTGTGCCTGGCTAGGCTGCAGTGCCAATGGTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGAAAGTGCCTAATGTGTGCCTGGCTAGGCTGCAGTGCCAATGGTGG  100

seq1  AGCATGACCTAATGTCTTCTGGCTCCAGGAGAGAAGGGAAGTGGAGAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGACCTAATGTCTTCTGGCTCCAGGAGAGAAGGGAAGTGGAGAATG  150

seq1  GAGGGCAACCAACATCTAAGGAAGGGTTCCCTCTGCATCAGCCTCAAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGCAACCAACATCTAAGGAAGGGTTCCCTCTGCATCAGCCTCAAGTT  200

seq1  CTGCAGTTTCCTGTGTGTCTGGTCGTTCTGTTCTCACATAGTGCAGGACG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGTTTCCTGTGTGTCTGGTCGTTCTGTTCTCACATAGTGCAGGACG  250

seq1  TGCTAAAGAAGATAATTCCTATCTTACTGCACTTCGGGGAGGGATCCTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAAAGAAGATAATTCCTATCTTACTGCACTTCGGGGAGGGATCCTCA  300

seq1  CACTTCCAGGAAGTGGGGCCACTGGGATTTGGACCTGTACATGCAAGGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCCAGGAAGTGGGGCCACTGGGATTTGGACCTGTACATGCAAGGCT  350

seq1  TTTATCCCCACATCTGTTCCCTCTTCCATACACTCTTATGAACTGAATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCCCCACATCTGTTCCCTCTTCCATACACTCTTATGAACTGAATCA  400

seq1  AATAATCAGAAGCTAAATCTTTATTTGATAGCTGTGAGAACAGAAGCCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATCAGAAGCTAAATCTTTATTTGATAGCTGTGAGAACAGAAGCCCA  450

seq1  AGAAGAGTCATTGACAATAATGATAGAGTCAACTTCTCTTAAGGATTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGTCATTGACAATAATGATAGAGTCAACTTCTCTTAAGGATTTCA  500

seq1  TTTAAGGCACACTCCATGCCCTTCTCCATAGTCTGGCTGAGCTCTTCCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGGCACACTCCATGCCCTTCTCCATAGTCTGGCTGAGCTCTTCCAG  550

seq1  AATGCTTTCTCCTTCCTTCCTCCACCATATATGACCGTCTTTAACTGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTTTCTCCTTCCTTCCTCCACCATATATGACCGTCTTTAACTGAGA  600

seq1  CCAAGTCTAGACCAGCTGCTATGTGTCCTCATCAAGCAGGAAAGAAACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTCTAGACCAGCTGCTATGTGTCCTCATCAAGCAGGAAAGAAACAT  650

seq1  CTTCACGACACCTGCCTGACTCTTTGGGGCAGTTTTTTCCCCCCATGTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACGACACCTGCCTGACTCTTTGGGGCAGTTTTTTCCCCCCATGTGA  700

seq1  TACTTTGCATTAAGGAAATTGTGATTAAAACATCTTTTACAAACTGCATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTGCATTAAGGAAATTGTGATTAAAACATCTTTTACAAACTGCATT  750

seq1  AATTCCTAGGCCAAGATAAAAATTCCATTTGACACAAATAGATTTTCCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCTAGGCCAAGATAAAAATTCCATTTGACACAAATAGATTTTCCAT  800

seq1  GGTGAGTTAGCACTGCATTGAGGGTAATGGGCGGGGGGAGGGG  843
      ||||||||||||||||||||||||| |||||||||||||||||
seq2  GGTGAGTTAGCACTGCATTGAGGGT-ATGGGCGGGGGGAGGGG  842

seq1: chr2_160466869_160467752
seq2: B6Ng01-076K06.g_68_953 (reverse)

seq1  TCCCA-CCCCCCAACCCCCAGCCACACGGCAGGCTCCTAAATCTCAGCTA  49
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACCCCCCCAACCCCCAGCCACACGGCAGGCTCCTAAATCTCAGCTA  50

seq1  CTCATTCTGCTATTCAAGGCTTGGGTCTTTCCCACCGGCCTTTCCTTTTA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTCTGCTATTCAAGGCTTGGGTCTTTCCCACCGGCCTTTCCTTTTA  100

seq1  TTCAGACAATTTTCAACTTTTGCTGAGCAGCTGCTGTAGCAGCAAAAGGC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGACAATTTTCAACTTTTGCTGAGCAGCTGCTGTAGCAGCAAAAGGC  150

seq1  AGCAGGACATTTCTGGTTGCTGGGATC-AACAGCATGAACGTTTTCCATG  198
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AGCAGGACATTTCTGGTTGCTGGGATCAAACAGCATGAACGTTTTCCATG  200

seq1  GATCACCAAGCAGGTTCTATTTTGAGAGTGTCCAACTCTTAACAGGGCAT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCACCAAGCAGGTTCTATTTTGAGAGTGTCCAACTCTTAACAGGGCAT  250

seq1  TAGATCTCTAGGCAAGGCATTATGGCAAGGGGAAAACTGCCAGAAAACTG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATCTCTAGGCAAGGCATTATGGCAAGGGGAAAACTGCCAGAAAACTG  300

seq1  TAGTCAGGAAAGCAGTGAAGCCAAGACTAGGAGACCACTAGGAGTGCATG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCAGGAAAGCAGTGAAGCCAAGACTAGGAGACCACTAGGAGTGCATG  350

seq1  CCAGTAGTAAATCCAGCACTTAGGAGATTCAGGGCAAATGATCCAGAGTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTAGTAAATCCAGCACTTAGGAGATTCAGGGCAAATGATCCAGAGTT  400

seq1  CAAGTTTGGCCTCAGCTATATAATGAGTTCAAGCCCAACCTGGGCTTCAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTTGGCCTCAGCTATATAATGAGTTCAAGCCCAACCTGGGCTTCAT  450

seq1  GAAACCCTATCTCAAAGTTACAAAGTAAAAGTTACAAAGTAGCCGGGTGT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCCTATCTCAAAGTTACAAAGTAAAAGTTACAAAGTAGCCGGGTGT  500

seq1  GGTGGCGCACGCCTTTAATCCCAGCACTCAGGAGGCAGAGGCAGGCGGAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCGCACGCCTTTAATCCCAGCACTCAGGAGGCAGAGGCAGGCGGAT  550

seq1  TTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGCCA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGCCA  600

seq1  GAGCCATACAGAGAAACCCTGTCTCGAAAAAACAAACAAAAAACAAACTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCATACAGAGAAACCCTGTCTCGAAAAAACAAACAAAAAACAAACTT  650

seq1  ACAAAGCTAGTAAAAACAAATATATTTTAAAAACTGTTAGGAGGGATATC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGCTAGTAAAAACAAATATATTTTAAAAACTGTTAGGAGGGATATC  700

seq1  TGGGTCCTGAACCATGAAAATCCCAGAGTGGAACAAAAGTATAGCCAAGG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTCCTGAACCATGAAAATCCCAGAGTGGAACAAAAGTATAGCCAAGG  750

seq1  CCTTGAGATTCCCTGGCTTGAAACCAGATGGAAGTTGAACATCAGTCACA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGAGATTCCCTGGCTTGAAACCAGATGGAAGTTGAACATCAGTCACA  800

seq1  TGACCCAACATAGCTTTCAGAAGCAAAAGGAGCAATGTATTTAAGTGTAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCCAACATAGCTTTCAGAAGCAAAAGGAGCAATGTATTTAAGTGTAC  850

seq1  CACAAAGGTATCTCACATTGCAATGAGGCAGAATTC  884
      ||||||||||||||||||||||||||||||||||||
seq2  CACAAAGGTATCTCACATTGCAATGAGGCAGAATTC  886