MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-078A18
Chromosome	2 (Build37)
Map Location	40,611,413 - 40,612,575
singlet/doublet	singlet
Overlap gene	Lrp1b
Upstream gene	LOC100042604, Magmas-ps, LOC666531
Downstream gene	LOC100042629
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100042604 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042604
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 mRNAs, 385 ESTs, 10 Proteins

name	Magmas-ps (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:606732
definition	note : mitochondria-associated protein involved in granulocyte-macrophage colony-stimulating factor signal transduction pseudogene pseudo : _no_value

name	LOC666531 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666531
definition	note : eukaryotic translation elongation factor 1 alpha 1 pseudogene pseudo : _no_value

name	Lrp1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:94217 MGI:2151136
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042629 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042629
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs

name	LOC100042604 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249304 GeneID:100042604
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 mRNAs, 385 ESTs, 10 Proteins product : similar to vacuolar H+ ATPase G1 transcript_id : XM_001479550.1

name	Lrp1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:16519538 GeneID:94217 MGI:2151136
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : low density lipoprotein-related protein 1B (deleted in tumors) transcript_id : NM_053011.1

name	LOC100042629 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249306 GeneID:100042629
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs product : hypothetical protein LOC100042629 transcript_id : XM_001479594.1

name	LOC100042604 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249305 GeneID:100042604
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479600.1

name	Lrp1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:16519539 GeneID:94217 MGI:2151136
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence IDA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005041 - low-density lipoprotein receptor activity [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006897 - endocytosis [Evidence IEA] codon_start : 1 exception : mismatches in translation note : low density lipoprotein receptor related protein LRP1B/LRP-DIT product : low density lipoprotein-related protein 1B protein_id : NP_443737.1

name	LOC100042629 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249307 GeneID:100042629
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479644.1

clone name	MSMg01-298F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388N03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-309D15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-387K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-203I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-067B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-192I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-190M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-197O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-207F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-197O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397K05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-152K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439D11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-495A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-202N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-309H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-265L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-319H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095G01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-139J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-092O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306B21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270O24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255J03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062O24
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-078A18.b	B6Ng01-078A18.g
ACC	DH893857	DH893858
length	1,234	1,154
definition	DH893857\|Mus musculus domesticus DNA, BAC clone: B6Ng01-078A18, 5' end.	DH893858\|Mus musculus domesticus DNA, BAC clone: B6Ng01-078A18, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctatattctccagattctataacatatttcaattttaaaaacaat cataatttaaaagtgattttacttacagactattttttatcttgtacaaa tttaagatatactattatcattaattaaatgtttatttgtggatttcaag aaacataaaatgtggggagccatcttggttccaggactctaccaaaagta gtctgcacagctcagagtgtgcactgcagaggctagcggcttctgggaca ggcgggagccacagagcttctggggcagcacccttttcaggctccagatc tccggccaccttcctggccagaggacatgtgtctgcccggcccgggagat ttttgcctcaggatcgaaagaagccatcgtggttccgggactccaccgaa agtagtctgcacaggtgagagtgtggactacagaagctaacagcttctgt gacaggccaaagcaacacagcttctgggaaaggtcctgttttgggccttc atcttcggccaggagggaggtccgaatgccagatatctgtgcaccttccc tgtaagaggagagcttgcctgcagagagtgctctgaccactgaaacttag aggagagagctagtctcccaggtctgctgatagggggtaacagaatcgcc agaggaacaatctctaaacatagacaactataacaactaactccagagat aaccagatggtgaaaggtaaacgtaagaatcttaaaaacagaagccaaga ccactaaccatcatcagaacccagcactcccacttcgcccagtctagggc accccaacacatctgaaaagctagacccggatttaaaagcatatctcatg atgatggtagaggacagcaagaaaggactttaataactcacttaaagaaa tacaggagaacactgctaaacaggtagaagacattaaagaggaagcacaa aatcccttaaagaattgcaggaaacacaaccaaacagtgatggaattgaa taaaaccatccaggaccttaaaagggaagtagaacaataagaaggcccaa agtgaggcaatgctggagaatgaaccctaggaagaatctggatcacagat gttgagcatcagcaacgaatcaagaattgtaggagaagatctcgatgtcg gagactcctatagagaacttcgctcacattcagaaattgagaatgccaag atcctactctgttacattcggaatctgggagatc	gaattcatagagcatggaagagctgaatggatatagaaatgtaatagaaa agagatacatccacatataacatatacttatatgtgtatgaaagttcctc ataagggaaattacaaaagattgctgaaagaaactgaatgatttctagga aatatagatgcactctacccagtgatttcaaacctcagttatactgacca tttctcttactttatatagaattgattcctcaagtatcacaactctatgg ttatttttgaggctacatatataattcagatgtcagatatcattgatgta gagtaattatataatactgaaaaagcaggagaatgtgcaatatatcatta aaagaactgttaataaagggaagataattaaagggatataatattaaggg aatgattccagaattataatacttaagctcagtaagtttccaataacaat tcccattcaatttaataggaagaagaaatccttaacaaattttattaaaa ttacaaacatacttcaattaaaccttaatgcatacctaaattatatttaa gtgataccaagtttataaaattatatggaataataaaagcacttttattg tcttttggtaagcaggagttacagagacagacctcaaaaagtagtaacag tataaggtgtagaaaattaggttgaagaatatttttatgtcagtaggaaa cgagctagagtcattgtggaaggaagaatcctaaatgagaacctaaccac aaacactggcctgtgggcaaacccatggtacatttttgattgatgacttt taatgtgtttttagttgaaatagatttacgttactctatccaataacttt tcttcctccagatgcttccagctagcctatcctgaatccctccagtgccc cttattggcatgttaacttcttttccatatatctataaatgtatgtgcct ttatatgcccatatacacacaatttataatctctaagcacatacatataa aattatgagtttatgtatacatatatatatgtacatgtacaatatatgta tataagtgatattgtcctaattagtaagacccttgtactgatgatgcgtc aataaaagcaaaacttatcaagttctagtacaggcatcaaaacctccctt tcta
quality values	Open. Hide. 61 47 31 43 61 61 61 50 61 61 61 61 61 61 61 49 36 61 61 61 61 61 61 61 61 18 15 23 14 20 13 26 26 44 19 32 35 44 59 61 61 61 61 55 55 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 59 61 59 35 30 37 37 44 28 35 32 52 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 59 55 61 61 61 61 61 61 61 61 61 61 52 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 59 61 59 59 61 61 61 61 61 61 59 61 61 61 61 61 59 59 61 55 59 61 61 61 61 59 59 59 59 61 59 59 52 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 59 59 61 61 61 61 61 61 59 61 61 59 61 61 61 61 55 61 61 61 61 61 55 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 55 61 55 61 55 55 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 55 52 53 53 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 47 61 53 61 50 53 61 61 43 61 61 61 53 61 46 53 61 50 61 61 61 61 53 61 53 53 61 61 61 61 61 61 61 61 61 53 50 53 53 61 53 61 61 61 61 61 61 53 61 50 61 50 61 61 38 57 53 57 57 47 57 53 57 57 57 53 53 47 57 50 57 53 53 57 50 57 53 57 57 57 43 53 38 53 53 53 57 47 57 53 57 53 52 40 57 32 53 57 45 57 45 57 52 53 53 50 50 57 53 53 40 53 47 32 39 47 53 52 53 57 52 57 57 43 38 53 25 47 47 47 47 45 47 43 47 45 38 57 37 50 38 36 35 38 38 45 57 17 57 43 32 37 37 46 53 45 53 42 53 41 41 53 53 42 53 50 47 47 47 34 46 46 53 45 53 37 57 41 28 44 53 52 50 52 47 47 38 46 23 52 57 38 53 37 10 47 37 38 31 39 52 28 53 57 27 57 37 57 36 24 57 22 36 45 53 53 39 40 33 53 38 57 29 37 32 57 38 27 57 53 53 53 53 47 36 53 53 33 41 53 30 48 41 40 21 26 31 43 40 28 53 30 32 34 53 37 36 48 36 33 30 57 33 33 53 45 30 33 38 31 32 38 27 44 40 30 31 33 41 36 32 44 47 47 39 35 29 30 32 29 19 46 38 29 32 32 30 30 33 25 29 38 24 36 27 43 29 29 29 44 46 51 29 29 28 29 30 21 15 10 36 37 24 36 23 15 46 27 30 51 43 36 28 29 25 30 35 43 35 41 28 27 32 36 35 29 35 35 28 27 36 26 38 28 43 25 33 29 27 28 33 38 28 25 33 14 46 10 30 19 23 19 29 51 28 23 21 36 26 20 27 29 29 29 28 29 46 23 51 31 26 29 46 26 28 27 35 23 23 17 33 17 29 31 20 12 28 28 41 30 38 22 41 22 23 18 22 27 20 29 20 33 31 13 29 12 12 29 25 8 36 27 18 38 26 31 29 28 13 18 17 12 20 38 51 25 34 31 34 22 13 29 14 51 21 19 22 22 20 20 23 27 10 23 17 29 34 36 14 12 19 13 21 24 19 8 30 11 20 18 14 16 26 12 10 27 24 18 19 13 21 22 28 8 16 13 30 27 23 17 23 25 28 14 13 34 10 9 17 10 21 13 10 17 42 42 26 12 36 17 12 18 23 30 11 18 8 4 3 10 16 17 29 30 12 14 29 6 10 23 22 14 10 20 19 10 5 10 12 12 33 18 21 12 8 19 19 16 26 23 11 6 12 7 4 6 8 16 7 13 12 14 10 10 7 15 14 7 7 22 4 7 6 6 10 8 3 3 4 14 3 3 7 11 14 6 6 3 2 2 4 7 14 11 5 7 17 5 6 5 3 16 9 18 5 3 6 5 1 11 4 6 13 3 14 4 7 15 6 4 3 3 17 6 6 5 13 7 12 4 8 4 4 1 2 9 6 27 9 12 6 4 4 3 3 4 7 4 6 6 9 3 3 4 3 4 8 4 7 6 7 5 3 7 5 7 2 1 13 1 4 8 12 4 9 13 17 3 5 4 5 12 10 3 11 8 9 7 6 8 7 4 8 4 3 1 3 6 5 5 17 3 3 13 11 9 9 5 5 4 5 19 9 3 2 1 1 3	Open. Hide. 61 47 55 47 19 14 13 12 7 9 12 10 12 12 27 59 59 59 61 61 61 61 61 61 55 55 61 61 61 61 59 61 61 61 59 61 61 61 61 59 59 61 61 61 61 61 52 61 43 45 35 28 36 28 32 37 52 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 59 61 61 61 61 61 61 61 61 59 59 59 55 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 59 61 59 59 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 59 61 61 59 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 47 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 53 61 61 61 61 52 61 61 61 61 61 53 52 52 61 61 39 57 57 57 57 57 53 53 45 57 57 47 57 57 53 57 53 57 57 53 57 57 50 53 53 53 57 57 57 57 57 53 53 57 57 57 57 57 53 53 57 57 53 53 57 57 57 53 57 53 50 53 57 52 57 53 43 57 57 50 52 52 47 47 43 52 57 47 41 52 50 53 52 41 53 53 53 45 57 57 57 57 53 53 57 53 53 53 50 53 45 52 41 52 53 52 47 31 33 22 38 31 50 45 57 43 41 38 38 50 50 41 37 21 53 52 53 52 23 52 53 38 50 32 57 57 57 57 27 52 52 41 53 37 53 53 42 22 57 38 25 26 23 36 53 50 53 42 47 50 52 36 39 33 30 38 45 57 37 52 34 45 41 16 52 33 57 30 52 27 37 37 37 44 43 53 47 40 48 52 31 53 37 26 47 40 29 29 28 53 34 47 37 57 35 33 36 40 28 33 25 16 53 30 53 24 37 57 35 27 34 57 47 32 46 32 29 29 35 30 12 29 29 28 44 51 51 51 44 30 39 19 38 31 28 20 30 39 28 36 51 51 32 22 30 29 46 28 33 14 51 51 51 27 29 39 26 31 28 29 51 30 29 29 34 39 25 51 29 27 29 24 38 29 30 33 31 35 33 33 38 28 36 25 35 21 9 22 29 25 51 51 41 35 28 26 19 19 15 21 29 28 20 41 23 38 28 34 8 13 32 24 28 29 29 28 23 26 26 28 38 28 28 29 26 41 28 27 28 33 46 24 26 26 28 23 28 29 41 26 46 46 30 16 26 29 22 21 28 25 11 26 29 35 17 11 28 25 38 26 28 29 31 51 51 29 21 28 28 26 31 34 31 29 27 21 29 28 22 41 29 23 14 7 28 34 29 18 29 19 28 19 44 24 19 15 5 5 17 22 51 38 20 28 22 24 23 34 15 23 15 28 18 10 27 51 21 31 21 10 29 31 33 13 18 7 15 26 25 29 19 32 12 26 11 26 11 26 17 14 28 44 44 25 24 9 19 12 34 33 23 10 7 4 9 12 22 7 6 5 12 23 8 8 4 12 7 12 15 14 9 5 7 11 14 26 15 26 31 12 8 14 9 19 3 3 8 10 15 19 12 12 13 6 10 9 27 18 8 10 3 5 11 11 9 19 6 11 16 5 27 20 5 4 18 5 10 7 8 6 23 8 5 7 11 4 8 3 3 3 3 4 7 16 24 24 15 14 10 12 16 8 14 5 5 15 32 20 24 5 21 6 15 18 18 6 6 6 8 5 7 8 14 7 12 7 9 6 5 6 9 10 18 5 13 10 4 9 9 5 8 13 13 18 6 9 8 10 22 12 20 21 19 5 6 9

Alignment Information

BAC End 1

BAC End 2

seq1: chr2_40611413_40612575
seq2: B6Ng01-078A18.g_68_1221

seq1  GAATTCATAGAGCATGGAAGAGCTGAATGGATATAGAAATGTAATAGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAGAGCATGGAAGAGCTGAATGGATATAGAAATGTAATAGAAA  50

seq1  AGAGATACATCCACATATAACATATACTTATATGTGTATGAAAGTTCCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATACATCCACATATAACATATACTTATATGTGTATGAAAGTTCCTC  100

seq1  ATAAGGGAAATTACAAAAGATTGCTGAAAGAAACTGAATGATTTCTAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGGAAATTACAAAAGATTGCTGAAAGAAACTGAATGATTTCTAGGA  150

seq1  AATATAGATGCACTCTACCCAGTGATTTCAAACCTCAGTTATACTGACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAGATGCACTCTACCCAGTGATTTCAAACCTCAGTTATACTGACCA  200

seq1  TTTCTCTTACTTTATATAGAATTGATTCCTCAAGTATCACAACTCTATGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTTACTTTATATAGAATTGATTCCTCAAGTATCACAACTCTATGG  250

seq1  TTATTTTTGAGGCTACATATATAATTCAGATGTCAGATATCATTGATGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTGAGGCTACATATATAATTCAGATGTCAGATATCATTGATGTA  300

seq1  GAGTAATTATATAATACTGAAAAAGCAGGAGAATGTGCAATATATCATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAATTATATAATACTGAAAAAGCAGGAGAATGTGCAATATATCATTA  350

seq1  AAAGAACTGTTAATAAAGGGAAGATAATTAAAGGGATATAATATTAAGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAACTGTTAATAAAGGGAAGATAATTAAAGGGATATAATATTAAGGG  400

seq1  AATGATTCCAGAATTATAATACTTAAGCTCAGTAAGTTTCCAATAACAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATTCCAGAATTATAATACTTAAGCTCAGTAAGTTTCCAATAACAAT  450

seq1  TCCCATTCAATTTAATAGGAAGAAGAAATCCTTAACAAATTTTATTAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATTCAATTTAATAGGAAGAAGAAATCCTTAACAAATTTTATTAAAA  500

seq1  TTACAAACATACTTCAATTAAACCTTAATGCATACCTAAATTATATTTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAACATACTTCAATTAAACCTTAATGCATACCTAAATTATATTTAA  550

seq1  GTGATACCAAGTTTATAAAATTATATGGAATAATAAAAGCACTTTTATTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATACCAAGTTTATAAAATTATATGGAATAATAAAAGCACTTTTATTG  600

seq1  TCTTTTGGTAAGCAGGAGTTACAGAGACAGACCTCAAAAAGTAGTAACAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTGGTAAGCAGGAGTTACAGAGACAGACCTCAAAAAGTAGTAACAG  650

seq1  TATAAGGTGTAGAAAATTAGGTTGAAGAATATTTTTATGTCAGTAGGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGGTGTAGAAAATTAGGTTGAAGAATATTTTTATGTCAGTAGGAAA  700

seq1  CGAGCTAGAGTCATTGTGGAAGGAAGAATCCTAAATGAGAACCTAACCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGCTAGAGTCATTGTGGAAGGAAGAATCCTAAATGAGAACCTAACCAC  750

seq1  AAACACTGGCCTGTGGGCAAACCCATGGTACATTTTTGATTGATGACTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACTGGCCTGTGGGCAAACCCATGGTACATTTTTGATTGATGACTTT  800

seq1  TAATGTGTTTTTAGTTGAAATAGATTTACGTTACTCTATCCAATAACTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTGTTTTTAGTTGAAATAGATTTACGTTACTCTATCCAATAACTTT  850

seq1  TCTTCCTCCAGATGCTTCCAGCTAGCCTATCCTGAATCCCTCCAGTGCCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTCCAGATGCTTCCAGCTAGCCTATCCTGAATCCCTCCAGTGCCC  900

seq1  CTTATTGGCATGTTAACTTCTTTTCCATATATCTATAAATGTATGTGCCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTGGCATGTTAACTTCTTTTCCATATATCTATAAATGTATGTGCCT  950

seq1  TTATATGCCCATATACACACAATTTATAATCTCCTAAGCACATACATATA  1000
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TTATATGCCCATATACACACAATTTATAATCT-CTAAGCACATACATATA  999

seq1  AAATTATGAGTATATGTATACATATATATATGTACATGTACAAATATATG  1050
      ||||||||||| ||||||||||||||||||||||||||||| ||||||||
seq2  AAATTATGAGTTTATGTATACATATATATATGTACATGTAC-AATATATG  1048

seq1  TATATAAGTGGATA-TGTCCTAAATAAAGTTAGACACTTGTACTGATGAT  1099
      ||||||||| |||| |||||||| |  ||| |||| ||||||||||||||
seq2  TATATAAGT-GATATTGTCCTAATT--AGTAAGACCCTTGTACTGATGAT  1095

seq1  GCGTTCAATAAAAGCCAAAAACTAACAAAAGTTCTAGTACCAGGCATCAA  1149
      ||| |||||||||||  |||||| |   ||||||||||| ||||||||||
seq2  GCG-TCAATAAAAGC--AAAACTTA-TCAAGTTCTAGTA-CAGGCATCAA  1140

seq1  AAACCTCCTTTCTA  1163
      || |  ||||||||
seq2  AACCTCCCTTTCTA  1154

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information