BAC Information

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BAC

Clone NameB6Ng01-079E11
Chromosome2 (Build37)
Map Location 7,949,169 - 7,950,323
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040648
Downstream geneLOC672230
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-079E11.bB6Ng01-079E11.g
ACCDH894732DH894733
length1,1371,152
definitionDH894732|Mus musculus domesticus DNA, BAC clone: B6Ng01-079E11, 5' end.DH894733|Mus musculus domesticus DNA, BAC clone: B6Ng01-079E11, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaagaattttgacactgtacagcagtgaccctacagtcattaat
caagatgctcaggttttactgacatgggtacatgacaaagttatacatgg
cttaccactggctgcctagcaattgcaattttatctgaaactgaaaaaaa
tgcctttaattaaccatgttgtagcactgtctgcatcttagcacttggag
tgtgtgctgacaaggaactgggcagcttaccagtatagaaaaagtccata
atgtaacagataaaagggttaggaaataacataataaacttctgagccaa
caagcaggaggactgagttatgtgagaactcacatgtgtaatgcagtgca
tttgaaatctagtactggggaggcagagacacatagatccctggtacttg
gtattcaactcatctaacctactcagaaagttccaggccactgagaccat
gtttcaaaaaagataatctcaagaatacagaatacacccaaatcaatctt
tgagccttcatatgtgtgtacccatcctatgtgaacatacacatacatgc
tcataggtacacacagacacaaaaagtgacaaaaaaagaccattgctgtg
cactttatatctactgtgaacagacaccatgactacctgtgtgctgccat
gctttctgccgtggtgataatggaatgactctctgacactgttaagccag
ccacaattaaatgtttgcctttgtaagagctgcctgggtcatggtgtctg
ttcacagtaatgaaatcctaactaagacaccaccatatcagactttctat
gtgtgttactggggcctaaatctagagctttcagtatatgttgaatgagc
ttcctcctcagtccttggtgtttgaggaaacagggtcttattctgtagcc
cagacaagcacccaacttgtcatcttcctgtcttcctcctgagtgtagga
ttatagctatgtacctctatgcttgcacacttctacatctgattatatat
ataatttcaaatatgtataaatattatattatatatttaaaatttaaata
aatagaaaatcgatgtgtgaagttgtttatgtggatgatcatgtgattta
tgctttatgtatgcagtgctagccagaaaagacattg
gaattctcacctgaagaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctagaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaaccgaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagccccaaacc
aaggattcccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgctggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
gtggaggagctagagaagtagccaggagctaaagggatctgcaccctata
gtggacacattatgactaccatacccgagctctgactctagctgctatat
atcaaagatgctagtcgcatcactgaaagagagccattgacttgcacttt
aatgccagtcaggacacctgtcaaagggattgtgggtcaggtgatatgag
gt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_7949169_7950323
seq2: B6Ng01-079E11.b_49_1185

seq1  GAATTCAAAGAATTTTGACACTGTACAGCAGTGACCCTACAGTCATTAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGAATTTTGACACTGTACAGCAGTGACCCTACAGTCATTAAT  50

seq1  CAAGATGCTCAGGTTTTACTGACATGGGTACATGACAAAGTTATACATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATGCTCAGGTTTTACTGACATGGGTACATGACAAAGTTATACATGG  100

seq1  CTTACCACTGGCTGCCTAGCAATTGCAATTTTATCTGAAACTGAAAAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACCACTGGCTGCCTAGCAATTGCAATTTTATCTGAAACTGAAAAAAA  150

seq1  TGCCTTTAATTAACCATGTTGTAGCACTGTCTGCATCTTAGCACTTGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTTAATTAACCATGTTGTAGCACTGTCTGCATCTTAGCACTTGGAG  200

seq1  TGTGTGCTGACAAGGAACTGGGCAGCTTACCAGTATAGAAAAAGTCCATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGCTGACAAGGAACTGGGCAGCTTACCAGTATAGAAAAAGTCCATA  250

seq1  ATGTAACAGATAAAAGGGTTAGGAAATAACATAATAAACTTCTGAGCCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAACAGATAAAAGGGTTAGGAAATAACATAATAAACTTCTGAGCCAA  300

seq1  CAAGCAGGAGGACTGAGTTATGTGAGAACTCACATGTGTAATGCAGTGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCAGGAGGACTGAGTTATGTGAGAACTCACATGTGTAATGCAGTGCA  350

seq1  TTTGAAATCTAGTACTGGGGAGGCAGAGACACATAGATCCCTGGTACTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAATCTAGTACTGGGGAGGCAGAGACACATAGATCCCTGGTACTTG  400

seq1  GTATTCAACTCATCTAACCTACTCAGAAAGTTCCAGGCCACTGAGACCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCAACTCATCTAACCTACTCAGAAAGTTCCAGGCCACTGAGACCAT  450

seq1  GTTTCAAAAAAGATAATCTCAAGAATACAGAATACACCCAAATCAATCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCAAAAAAGATAATCTCAAGAATACAGAATACACCCAAATCAATCTT  500

seq1  TGAGCCTTCATATGTGTGTACCCATCCTATGTGAACATACACATACATGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCTTCATATGTGTGTACCCATCCTATGTGAACATACACATACATGC  550

seq1  TCATAGGTACACACAGACACAAAAAGTGACAAAAAAAGACCATTGCTGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGGTACACACAGACACAAAAAGTGACAAAAAAAGACCATTGCTGTG  600

seq1  CACTTTATATCTACTGTGAACAGACACCATGACTACCTGTGTGCTGCCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTATATCTACTGTGAACAGACACCATGACTACCTGTGTGCTGCCAT  650

seq1  GCTTTCTGCCGTGGTGATAATGGAATGACTCTCTGACACTGTTAAGCCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCTGCCGTGGTGATAATGGAATGACTCTCTGACACTGTTAAGCCAG  700

seq1  CCACAATTAAATGTTTGCCTTTGTAAGAGCTGCCTGGGTCATGGTGTCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAATTAAATGTTTGCCTTTGTAAGAGCTGCCTGGGTCATGGTGTCTG  750

seq1  TTCACAGTAATGAAATCCTAACTAAGACACCACCATATCAGACTTTCTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAGTAATGAAATCCTAACTAAGACACCACCATATCAGACTTTCTAT  800

seq1  GTGTGTTACTGGGGCCTAAATCTAGAGCTTTCAGTATATGTTGAATGAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTTACTGGGGCCTAAATCTAGAGCTTTCAGTATATGTTGAATGAGC  850

seq1  TTCCTCCTCAGTCCTTGGTGTTTGAGGAAACAGGGTCTTATTCTGTAGCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCCTCAGTCCTTGGTGTTTGAGGAAACAGGGTCTTATTCTGTAGCC  900

seq1  CAGACAAGCACCCAACTTGTCATCTTCCTGTCTTCCTCCTGAGTGTAGGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAAGCACCCAACTTGTCATCTTCCTGTCTTCCTCCTGAGTGTAGGA  950

seq1  TTATAGCTATGTACCTCTATGCTTGCAACAACTTCTACATCTGATTATAT  1000
      |||||||||||||||||||||||||||   ||||||||||||||||||||
seq2  TTATAGCTATGTACCTCTATGCTTGCA--CACTTCTACATCTGATTATAT  998

seq1  ATATAATTTTAAAATATGTTATATATATTTATATTATATATTTAAAATTT  1050
      |||||| ||| ||||||| |||| ||| ||||||||||||||||||||||
seq2  ATATAA-TTTCAAATATG-TATAAATA-TTATATTATATATTTAAAATTT  1045

seq1  AAAATATATAGAAAATTCAGATGTGTGTATGTGTGTTTATGTGTATGAAT  1100
       ||||| |||||||||   |||||||| | || |||||||||| ||| ||
seq2  -AAATAAATAGAAAAT--CGATGTGTG-AAGT-TGTTTATGTGGATG-AT  1089

seq1  CTATGTGAATTTATGCTTTATGTATGCAGTTTGCAGAGGCCAGAAGAGGA  1150
      | ||||| |||||||||||||||||||||  |||    ||||||| | ||
seq2  C-ATGTG-ATTTATGCTTTATGTATGCAG--TGC--TAGCCAGAA-AAGA  1132

seq1  CATTG  1155
      |||||
seq2  CATTG  1137