BAC Information

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BAC

Clone NameB6Ng01-081M20
Chromosome2 (Build37)
Map Location 80,704,576 - 80,705,718
singlet/doubletsinglet
Overlap genenone
Upstream genePde1a, LOC668005, Prdx6-rs1, Dnajc10, Frzb, Nckap1, LOC624223, Dusp19, LOC672381, Nup35, LOC103324, LOC668027
Downstream geneLOC100040624, LOC100040655, LOC100040704
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-081M20.bB6Ng01-081M20.g
ACCDH896541DH896542
length1,1291,174
definitionDH896541|Mus musculus domesticus DNA, BAC clone: B6Ng01-081M20, 5' end.DH896542|Mus musculus domesticus DNA, BAC clone: B6Ng01-081M20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccattgtccttctcttggacaaataccccttccctgtctctcctg
tacgcttctccttctccctcatcctctatatcctttctttgtctcttatc
tctaccctctgtccctctggggtaaatgaatcttctttttgctgagaact
tgttcttgcagagtactgagctgatatcaatactttcacagagtctatcc
agttcttctagtactacttattggcttgtttttgatcaatctatatactg
tctcatataacaacttcccttatttcctttaaaatataagcaatctgaca
tcatacattaatgttagcttgattttgagctcttgagcttttctaaggtg
ccataaaaaaaatcaaactctgatctcagttgccatattaaaatgatgaa
tgagagcagaaaataatttctgatgataaagatgtttgcgatttctttgc
caaggttttaaaatattcttttgcaggagattacaaaaaggatcagaata
tcatgtcatttgcttgctcatatagatatttaaattttgaatgctgaggg
aatttgaccatctgaggagagattatccaaggaagagagtaagcaaacaa
acagagaactagatagctgaatgtagaagacagtttggatatgtcaaatg
gctagcaactagataccaattttttttgtgaatatttttgattaaaagat
aaaaacaaaagtatatcttctccatgacagatttctcctgtgacttagag
gacaggataatttagcaagcggtaacaacaaaactatccaatctaccaaa
aaatgaaagccgtagaaaacttgctataataggggtctctcttgaaccct
catctagaaaatttggcgagcttaatttttttcccttagcatggacttat
tataacatatgttactttttaatctaggaaaagtagcacaagttactttt
cctagattaaaaggtccctttccagctacacggttacgtctctctctctg
gacaaacattatcaggcttgaaggatggcattctttactctcatgcaatg
caaggcttaaaatccctcttgtggttttctttacaacccctcactagact
ggggggttcaccttccctttcgttcaatc
gaattctcacctgaggaatacagaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctaagat
tccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcttgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagcattatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtagacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatta
aagggtggaccatgtagagactgccttatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgcccacagtcagctaatggacggatcacagggctccca
atggagagctagagaaagtacccaaggagctaaagggatctgcaacccta
tagttgatcacattatggactaaccagtaccccgagcctcttgactctag
ctgcatatgtatcaaagaatgacctggtcggccatcatggaaaagaagca
ttgaccacacacctttaatgccgaatggtacgcgcagtcaaaaaggagtt
tgccgctaagtgagaatgtgcgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_80704576_80705718
seq2: B6Ng01-081M20.b_48_1176

seq1  GAATTCCATTGTCCTTCTCTTGGACAAATACCCCTTCCCTGTCTCTCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTGTCCTTCTCTTGGACAAATACCCCTTCCCTGTCTCTCCTG  50

seq1  TACGCTTCTCCTTCTCCCTCATCCTCTATATCCTTTCTTTGTCTCTTATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGCTTCTCCTTCTCCCTCATCCTCTATATCCTTTCTTTGTCTCTTATC  100

seq1  TCTACCCTCTGTCCCTCTGGGGTAAATGAATCTTCTTTTTGCTGAGAACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCCTCTGTCCCTCTGGGGTAAATGAATCTTCTTTTTGCTGAGAACT  150

seq1  TGTTCTTGCAGAGTACTGAGCTGATATCAATACTTTCACAGAGTCTATCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTGCAGAGTACTGAGCTGATATCAATACTTTCACAGAGTCTATCC  200

seq1  AGTTCTTCTAGTACTACTTATTGGCTTGTTTTTGATCAATCTATATACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTTCTAGTACTACTTATTGGCTTGTTTTTGATCAATCTATATACTG  250

seq1  TCTCATATAACAACTTCCCTTATTTCCTTTAAAATATAAGCAATCTGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATATAACAACTTCCCTTATTTCCTTTAAAATATAAGCAATCTGACA  300

seq1  TCATACATTAATGTTAGCTTGATTTTGAGCTCTTGAGCTTTTCTAAGGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACATTAATGTTAGCTTGATTTTGAGCTCTTGAGCTTTTCTAAGGTG  350

seq1  CCATAAAAAAAATCAAACTCTGATCTCAGTTGCCATATTAAAATGATGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAAAAAAAATCAAACTCTGATCTCAGTTGCCATATTAAAATGATGAA  400

seq1  TGAGAGCAGAAAATAATTTCTGATGATAAAGATGTTTGCGATTTCTTTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGCAGAAAATAATTTCTGATGATAAAGATGTTTGCGATTTCTTTGC  450

seq1  CAAGGTTTTAAAATATTCTTTTGCAGGAGATTACAAAAAGGATCAGAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTTTTAAAATATTCTTTTGCAGGAGATTACAAAAAGGATCAGAATA  500

seq1  TCATGTCATTTGCTTGCTCATATAGATATTTAAATTTTGAATGCTGAGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTCATTTGCTTGCTCATATAGATATTTAAATTTTGAATGCTGAGGG  550

seq1  AATTTGACCATCTGAGGAGAGATTATCCAAGGAAGAGAGTAAGCAAACAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGACCATCTGAGGAGAGATTATCCAAGGAAGAGAGTAAGCAAACAA  600

seq1  ACAGAGAACTAGATAGCTGAATGTAGAAGACAGTTTGGATATGTCAAATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGAACTAGATAGCTGAATGTAGAAGACAGTTTGGATATGTCAAATG  650

seq1  GCTAGCAACTAGATACCAATTTTTTTTGTGAATATTTTTGATTAAAAGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGCAACTAGATACCAATTTTTTTTGTGAATATTTTTGATTAAAAGAT  700

seq1  AAAAACAAAAGTATATCTTCTCCATGACAGATTTCTCCTGTGACTTAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAAAAGTATATCTTCTCCATGACAGATTTCTCCTGTGACTTAGAG  750

seq1  GACAGGATAATTTAGCAAGCGGTAACAACAAAACTATCCAATCTACCAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGATAATTTAGCAAGCGGTAACAACAAAACTATCCAATCTACCAAA  800

seq1  AAATGAAAGCCGTAGAAAACTTGCTATAATAGGGGTCTCTCTTGAACCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAAAGCCGTAGAAAACTTGCTATAATAGGGGTCTCTCTTGAACCCT  850

seq1  CATCTAGAAAATTTGGCGAGCTTAATTTTTTTCCCTTAGCATGGACTTAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTAGAAAATTTGGCGAGCTTAATTTTTTTCCCTTAGCATGGACTTAT  900

seq1  TATAACATATGTTACTTTTTAATCTAGGAAAAGTAAGCACAAGTTACTTT  950
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TATAACATATGTTACTTTTTAATCTAGGAAAAGT-AGCACAAGTTACTTT  949

seq1  TCCTAGATTAAAAAGGTCCCTTTCCAGCTACACGGTTACGTCTCTCTCTC  1000
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGATT-AAAAGGTCCCTTTCCAGCTACACGGTTACGTCTCTCTCTC  998

seq1  TGGACAAACATTATCAGGCTTGAAGGATGGCATTCCTTTACCTTCTCATG  1050
      |||||||||||||||||||||||||||||||||| ||||||  |||||||
seq2  TGGACAAACATTATCAGGCTTGAAGGATGGCATT-CTTTAC--TCTCATG  1045

seq1  CAATGCCAAGGCTTAAAAATCCCTCTTGTGGTTTTTTCCTTTACAAACCC  1100
      ||||| |||||||| ||||||||||||||||||||   ||||||||   |
seq2  CAATG-CAAGGCTT-AAAATCCCTCTTGTGGTTTT---CTTTACAA---C  1087

seq1  CCTTCACTTAGACCTGGGGGTTCACTCTCCTTTCTGTTCAATC  1143
      || |||| |||||  ||||||||||  ||| ||  ||||||||
seq2  CCCTCAC-TAGACTGGGGGGTTCACCTTCCCTTTCGTTCAATC  1129