BAC Information

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BAC

Clone NameB6Ng01-082K14
Chromosome2 (Build37)
Map Location 87,436,161 - 87,436,451
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr1082, Olfr1083, Olfr1084, Olfr1085, Olfr1086, Olfr1087, Olfr1088-ps1, Olfr1089, Olfr1090, Olfr1091-ps1, GA_x5J8B7W3Y5M-123838-124302, Olfr1093, Olfr141, Olfr1094, Olfr1095, Olfr1096-ps1, Olfr1097, Olfr1098, Olfr1099, Olfr1100, Olfr1101, Olfr1102, Olfr1103-ps1, Olfr1104, Olfr1105, Olfr1106, Olfr1107, GA_x5J8B7W3Y5M-419033-418135, Olfr1109, Olfr259, LOC668402, Olfr1110, Olfr1111, Olfr1112, LOC228238, Olfr1113, Olfr1114-ps1, LOC546767, Olfr1115, Olfr1521-ps1, LOC100041923, Olfr1117-ps1, GA_x5J8B7TY7N2-4-429, LOC668424, Olfr1118, Olfr1119-ps1, Olfr1120, Olfr1121, Olfr1122, LOC668432, Olfr1123, Olfr1125, Olfr1126, Pramel7, Pramel6, LOC668439, Olfr1127-ps1, Olfr253-ps1, Olfr1128, LOC100042038, LOC668445, LOC668447, Olfr1129
Downstream geneOlfr1130, Olfr1131, Olfr1132, LOC100042076, Olfr1133, Olfr1134, Olfr1135, Olfr1136, Olfr1137, Olfr1138, GA_x5J8B7W3Y5M-1033291-1033773, Olfr1140, Olfr1141, Olfr152, Olfr1142-ps1, Olfr1143, GA_x5J8B7W3Y5M-1094074-1093275, Olfr1145, Olfr1146-ps1, Olfr1147-ps1, Olfr1148, Olfr1149-ps1, Olfr1150-ps1, Olfr1151, Olfr1152, Olfr1153, Olfr1154, Olfr1155, Olfr1156, Olfr1157, Olfr74, Olfr1158, Olfr1159-ps1, Olfr1160, Olfr1161, Olfr73, Olfr1162, Olfr1163, Olfr1164, Olfr1165, Olfr1166, Olfr1167, Olfr1168, Olfr1169-ps1, Olfr1170, Olfr1171-ps1, Olfr1172-ps1, Olfr1173, Olfr1174, Olfr1175, Olfr1176, Olfr1177, Olfr1178, Olfr1179, Olfr1180, Olfr1181, Olfr1182, Olfr1183, Olfr1184, Olfr1185-ps1, Olfr1186, Olfr1187-ps1, Olfr1188, LOC668528, Olfr1189
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-082K14.bB6Ng01-082K14.g
ACCDH897150DH897151
length818767
definitionDH897150|Mus musculus domesticus DNA, BAC clone: B6Ng01-082K14, 5' end.DH897151|Mus musculus domesticus DNA, BAC clone: B6Ng01-082K14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagtttggaagcattttattgagaattttgtatcatcataaggga
aattgttttgtaatttttttctctttggtgagtctgtgatttgaatatca
gaacaactgtggcctcataaaatgaattgaacagtgttctttctgtttct
gtggtttggattattgtctcatagaaagaattaggcattgttctttcaat
gtatattttgagaaataatttgaaaagtattagtgttaattctttgaagg
tttgaaggaatcctatgatgaactcatataattctggcctcttttcactg
ggagattttaattaatgcttctattttactagggtttatgtgtatgttta
aattgtttatctgttcttgatttaactctggtaggtcatatttatcagaa
aatttaccaatttcatgtaggtttttttaggttggaagagcacaaatttt
taaataattcgcttatgattctctggatttcttcaacatttgttgtttgg
ttccaattttcatctcaaattttattagtttataaatatggatttttctc
tccatattttacttaataacagtaatggtttgtcaataatattaattttc
tcaaagaagcaactcttcatttcatttatgcattgtaccatttaatcctt
tgtaccatttgtttgtttgtttgtttcaattttattgatttcagccattt
gattatttcttggcatctactctctctatttgctgttatttttttcatct
tgttctagagctttttttgtgctgttaagttactaatctgagatctctcc
agtatgtgtgtgtgtgtg
gaattcatctttgtattcctgctgtagcttggtaggtatttccttaggta
aacttttagatggtaggtgaagttaaacttggaactgaaattaggggctg
gacaatgaaacagtgtggggagcgggtgtggcggcagtcccaaaggcgcc
agggactgcagctaagtcatatgacttgcacctgacttcctcatataaga
cacaaacatcttgagtgctgcgcaggtgtaccaggatacaggtgaatcca
atttggtggagatttgcccctgctgccctgattagctgaagctgcgtgcc
tggtgaggtggcgtggcctgctgtgcgtggatgggaactgagagtataaa
agagtgagaggcccagggttcgggggagatataaacaggggagatataaa
caggggagatataaacaagggagatataaacaagggagatatatggagaa
agaagaaacaggactgaataaatgtgtgcagaaggatcctgtagcagcgt
cgttcttcctggcctgttgagtgcgcgcaacaagtggtgccgaaacccgg
gaagaaaaactcgggacgggacgagaagacctgggacccaggacaaggga
aaagaaacatctttcaggcatgagcgaagaccccctgctacagggaggga
ttcagaacttgcatcacggggaaggagtggttaataaaggttcctgtaaa
acagacttgttgagaaggatcccggcgtgggattcagactcttcagctgg
ggaacggtactgattga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_87436161_87436451
seq2: B6Ng01-082K14.g_566_823 (reverse)

seq1  ACCGTTCCCCAGCTGAAGAGTTCTGAAT-TCACGCAGTTGAATCCTTCTC  49
      |||||||||||||||||||| |||||||  ||||| |  | |||||||||
seq2  ACCGTTCCCCAGCTGAAGAG-TCTGAATCCCACGCCG--GGATCCTTCTC  47

seq1  AAC-AGTCTGTTTTACGGGAACACTTCATT-ACCAC-CATTCCCCAGCTG  96
      ||| |||||||||||| ||||| ||| ||| ||||| | ||||||   ||
seq2  AACAAGTCTGTTTTACAGGAAC-CTTTATTAACCACTCCTTCCCC--GTG  94

seq1  AGG--AGTTCTGAATCCACACCGGATCCTTCTCAACAGTCTGTTTTACGG  144
      | |  ||||||||||||        ||| | | | |||   || || || 
seq2  ATGCAAGTTCTGAATCC-------CTCCCTGT-AGCAGGGGGTCTT-CGC  135

seq1  GAA--CCTTTATGACCGTGAC----CCGCAGTTCTGGTTCCGGAATGAGG  188
        |  |||  | ||  ||  |    ||   || |||| |||      |||
seq2  TCATGCCTGAAAGA-TGTTTCTTTTCCCTTGTCCTGGGTCC-----CAGG  179

seq1  AATCTTCCTTGCGCCGGTGATGGTTAACTCCCGTCCCGAGTTTTCTTGTC  238
        |||||             | |     |||||||||||||||| |  ||
seq2  --TCTTC-------------TCG-----TCCCGTCCCGAGTTTT-TCTTC  208

seq1  CCGGGTTTCCGGCACCAACTCTTACACGCGTTCGCTACCGGCCAGGAAGA  288
      |||||||| ||||||||  | ||   ||||  | | || |||||||||||
seq2  CCGGGTTT-CGGCACCACTTGTT--GCGCGCACTCAACAGGCCAGGAAGA  255

seq1  ACG  291
      |||
seq2  ACG  258