BAC Information

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BAC

Clone NameB6Ng01-085K05
Chromosome2 (Build37)
Map Location 66,750,361 - 66,751,448
singlet/doubletsinglet
Overlap genenone
Upstream geneA330102K23Rik, Galnt3, LOC620893, Ttc21b, Scn1a, LOC100039486, LOC383706, Scn9a, Scn7a, LOC383707
Downstream geneLOC100039540, Gm1322, Cmya3, LOC621171
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-085K05.bB6Ng01-085K05.g
ACCDH899259DH899260
length1,0611,210
definitionDH899259|Mus musculus domesticus DNA, BAC clone: B6Ng01-085K05, 5' end.DH899260|Mus musculus domesticus DNA, BAC clone: B6Ng01-085K05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttagcttagtcccttttttccatttcagtcagatggaggaaaa
gaatgaataaaagttcataaatacaccttcattgtaactgtctatatgca
cttgcttcttggagttaacttaagtactcacaagaaatgtctctaaaata
gagagaagaaagcatcagtatttgttgcaactttttccttctattttctt
gcttttttgagaatattatttctgccccttaccattaacatgcttagaaa
actgtccctaatcagtaatttgtagctacaacctagagttaaaactgctt
atttttctttgagtatgggctggtacaaaattcgccttgcctcactctct
ggctgtatgtattacaacaacttcatactggacaggaacaaagagaatct
gtagggcttaataactgataaggaaaggaatataattttcagaatctcct
gaaaagcaatagagagtaaaataccattaaaataaagatgccttcagaac
agcggcattctttgaaaaagcccacttggaggtaactgtaggttgatggc
ccatttatcatccccctactcatcagcttatgaaaaattatggtattaaa
aaggcccactgtgtcttgtagatataaagtcagaaaatcaatttgtgaat
cataggagtcatggtaggtactagcaatgaggcagcttttgagatttttt
ttaaagctttttatccattctttatggtgtggcagaaataggaagctttg
aatcacaacaacacttttatttaggtagtttagaatgagcatgcctctct
atacagtctaagaatctctgtagtccttagaaggacaaattattaaatat
ataagttcatctgaagccaaatttgcaatctaaaatgtcctttttatctc
caatgtaaaccttttatataaatttatatatggataaagcatgagtttgc
ccaataatatagatagtatatagagaaataatactttcaagcattgagcc
atgggaaatgtatttgttcagcattcaccttataccctttacgtattctt
acacaatttat
gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacca
ggagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaggaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaccagagaactcctaaacc
tgataaacaacttcggtgaagtagctggatataaaattaactcaaacaag
tcaatggcctttctctacacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagtcacaaataatataaaatatctcggag
tgactctaactaaggaagtgaaagatctgtatgataaaaacttcaagtct
ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggatcaacattgtaaaaatggctatcttgccaaaag
caatctatagattcaatgcaatccccatcaaaattccaactcaattcttc
aacgaattagaaggagcaatttgcaaattcatctggaataacaaaaaacc
taggatagcaaaaactcttctcaaggataaaagaacctctggtggaatca
ccatgcctgacctaaagctttactacagagcaattatggtaaaaactgca
tggtactggtatagagacagacaaatagaccaatgggatagattgagacc
cagaaatggacccacacactatggtcacttgatcttcgacaagggagcta
aaccatccagtgaagaatgacagcattttcaacattgctgctggcacaac
tggtgttatcatgtagaagaatgcaatcgatcatacttatctcttgtact
aagtcaaatctaatggatcaagacttccataaacagagacttgaactggg
ggtaaagcttgagaattgaacaggaattctggatggaccgcaatgctgtg
cgtaatcgagaatgcaaatggactataggaatcagttctggagcaagaac
cgtatagcagagcctagttggagctcttcatgctaggcattatccattaa
aagaactcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_66750361_66751448
seq2: B6Ng01-085K05.b_46_1106 (reverse)

seq1  ATAAATTTGTGTAAGAATACGTAAAAGGTGAATACAGGTGAAATGCTGGA  50
      ||||| ||||||||||||||||||| |||  ||| ||||| ||||||| |
seq2  ATAAA-TTGTGTAAGAATACGTAAAGGGT--ATA-AGGTG-AATGCTGAA  45

seq1  CCAAAATTACCATTTTCCCAATGGCTCAATTGCTTTGAAAGTATTTATTT  100
      | || |    |||||  || ||||||||| ||| ||||||||| ||||||
seq2  CAAATA----CATTT--CCCATGGCTCAA-TGC-TTGAAAGTA-TTATTT  86

seq1  CTCTATAATACTAATCTATATTATTTTGGGCAAAACTCATGCTTTATCCA  150
      |||||| ||||| ||||||||||  |||||| ||||||||||||||||||
seq2  CTCTAT-ATACT-ATCTATATTA--TTGGGC-AAACTCATGCTTTATCCA  131

seq1  TTAATATAAATTTATATTAAAAGGTTTACATTGGAGATAAAAAGGACAAT  200
      |  ||||||||||||| |||||||||||||||||||||||||||||| ||
seq2  T--ATATAAATTTATA-TAAAAGGTTTACATTGGAGATAAAAAGGAC-AT  177

seq1  TTTAGATTGCAAATTTGGCTTCAGATGAACTTATATATTTTAATAAATTT  250
      ||||||||||||||||||||||||||||||||||||| ||||||||  ||
seq2  TTTAGATTGCAAATTTGGCTTCAGATGAACTTATATA-TTTAATAA--TT  224

seq1  TGTCCTTCCTAAGGACTACAGAGATTCTTAGACTGTATAGAGAGGCATGC  300
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTT-CTAAGGACTACAGAGATTCTTAGACTGTATAGAGAGGCATGC  273

seq1  TCATTCTAAACTACCTAAATAAAAGTGTTGTTGTGATTCAAAGCTTCCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCTAAACTACCTAAATAAAAGTGTTGTTGTGATTCAAAGCTTCCTA  323

seq1  TTTCTGCCACACCATAAAGAATGGATAAAAAGCTTTAAAAAAAATCTCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGCCACACCATAAAGAATGGATAAAAAGCTTTAAAAAAAATCTCAA  373

seq1  AAGCTGCCTCATTGCTAGTACCTACCATGACTCCTATGATTCACAAATTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGCCTCATTGCTAGTACCTACCATGACTCCTATGATTCACAAATTG  423

seq1  ATTTTCTGACTTTATATCTACAAGACACAGTGGGCCTTTTTAATACCATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTGACTTTATATCTACAAGACACAGTGGGCCTTTTTAATACCATA  473

seq1  ATTTTTCATAAGCTGATGAGTAGGGGGATGATAAATGGGCCATCAACCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCATAAGCTGATGAGTAGGGGGATGATAAATGGGCCATCAACCTA  523

seq1  CAGTTACCTCCAAGTGGGCTTTTTCAAAGAATGCCGCTGTTCTGAAGGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTACCTCCAAGTGGGCTTTTTCAAAGAATGCCGCTGTTCTGAAGGCA  573

seq1  TCTTTATTTTAATGGTATTTTACTCTCTATTGCTTTTCAGGAGATTCTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTATTTTAATGGTATTTTACTCTCTATTGCTTTTCAGGAGATTCTGA  623

seq1  AAATTATATTCCTTTCCTTATCAGTTATTAAGCCCTACAGATTCTCTTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATATTCCTTTCCTTATCAGTTATTAAGCCCTACAGATTCTCTTTG  673

seq1  TTCCTGTCCAGTATGAAGTTGTTGTAATACATACAGCCAGAGAGTGAGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGTCCAGTATGAAGTTGTTGTAATACATACAGCCAGAGAGTGAGGC  723

seq1  AAGGCGAATTTTGTACCAGCCCATACTCAAAGAAAAATAAGCAGTTTTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCGAATTTTGTACCAGCCCATACTCAAAGAAAAATAAGCAGTTTTAA  773

seq1  CTCTAGGTTGTAGCTACAAATTACTGATTAGGGACAGTTTTCTAAGCATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGGTTGTAGCTACAAATTACTGATTAGGGACAGTTTTCTAAGCATG  823

seq1  TTAATGGTAAGGGGCAGAAATAATATTCTCAAAAAAGCAAGAAAATAGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGGTAAGGGGCAGAAATAATATTCTCAAAAAAGCAAGAAAATAGAA  873

seq1  GGAAAAAGTTGCAACAAATACTGATGCTTTCTTCTCTCTATTTTAGAGAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAAGTTGCAACAAATACTGATGCTTTCTTCTCTCTATTTTAGAGAC  923

seq1  ATTTCTTGTGAGTACTTAAGTTAACTCCAAGAAGCAAGTGCATATAGACA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTGTGAGTACTTAAGTTAACTCCAAGAAGCAAGTGCATATAGACA  973

seq1  GTTACAATGAAGGTGTATTTATGAACTTTTATTCATTCTTTTCCTCCATC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACAATGAAGGTGTATTTATGAACTTTTATTCATTCTTTTCCTCCATC  1023

seq1  TGACTGAAATGGAAAAAAGGGACTAAGCTAAAGAATTC  1088
      ||||||||||||||||||||||||||||||||||||||
seq2  TGACTGAAATGGAAAAAAGGGACTAAGCTAAAGAATTC  1061