BAC Information

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BAC

Clone NameB6Ng01-085M07
Chromosome2 (Build37)
Map Location 36,559,678 - 36,560,520
singlet/doubletsinglet
Overlap genenone
Upstream geneDab2ip, Ttll11, Ndufa8, 1700010A17Rik, Lhx6, Rbm18, LOC100042236, Mrrf, LOC100040493, Ptgs1, Olfr334-ps1, Olfr335, Olfr336-ps1, Olfr337-ps1, Olfr338, LOC675440, Olfr339, Olfr340, Olfr341, Olfr342, Olfr343-ps1, Olfr344, Olfr345, Olfr346
Downstream geneOlfr347, Olfr348, Olfr50, Rpl18p, Olfr3, Olfr349-ps1, Olfr350, Olfr351, Olfr352, Olfr353, Olfr354, Olfr355, Olfr356, Olfr357, Olfr358, Olfr359-ps1, Olfr360, Olfr361, Olfr362, Olfr364-ps1, Olfr365, Olfr366, Olfr367, Olfr368, Pdcl, Rc3h2, Zbtb6, Zbtb26, Rabgap1, Gpr21, 6430510M02Rik, Strbp, LOC639491
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-085M07.bB6Ng01-085M07.g
ACCDH899346DH899347
length1,089971
definitionDH899346|Mus musculus domesticus DNA, BAC clone: B6Ng01-085M07, 5' end.DH899347|Mus musculus domesticus DNA, BAC clone: B6Ng01-085M07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgttgtcctttttcaaatgtggttatttgatt
ttctggagtccaggttcttgagttttttgtatacattagatattagtccc
ctatcagatttaggattggtaaaaatcctttccaagtctgttggtggcct
ttttgtcttattgaaagcatcttttgccttacagaagctctgcaaattca
tgaggtcccgtttgttgattcttgatcttagagcacaagccattgctgtt
ctgttcaggtatttttcccctgtgcccaaagggtcatttatatatactac
catatcatctgcaaatagtgatattttgacttcttcctttacaatttcta
tccccttgatctccttttgttgtctaattgctctggctaggactatgttg
aataggtagagaaaaagtgggcagccttgtctagtccctgattttagtgg
aattgcttcaagtttttctccattcagtttgatgttggctactggtttgc
tgtatattgcttttattatgttacatatgggccttgaattcctgatcttt
ccaagacttttatcatgaatgggtgttggatttgtcaaatgctttctcag
catctgactagatgatcatgtggattttgtttttgagtttgtttatatag
tggattacgttgatgtattcccatatattaaaccatccctgcattcctga
gatgaagcctacttgatcatgatggatgatcattttgatgtgttcttgga
ttccatttgcaaggattttattgagtatttttacatcgatatttataagg
gaaattggtctgaagttctccttctttgttggatctttgtgtggtttagg
tatctgagtaattgtggcttcatggaatgaattgggtagagtaccttctc
tttctatttgtggaatagtttgaggagagttgaaattaggtcttctttga
aagtctgatacaactgtgcactaacccttctggtcctgaccttttgtttg
ggtgggaaaccatgagcgactgctttctattccttagggaaatggcctgg
ttctactgttaactggactgtataatttgggtattgggg
gaattcatgagccatgggtaactctaaaggtctaggggaagccaatagac
ttcctgggagacacgagaacacaatattcaatcttgaaacaacctatggg
accccttcccaacaagataactcggcttctgggatgagatctgctgacta
aaatgggagcacaaatccactttgtacttgagagaatgtaggttctgtat
gaaagggtcccttacacatcttgattatggtactagaagaagaatataag
ctttatgtcacatcttctccaaatattgataaagacctatatctggagag
gttataggaagagattctaggggtactgatggagaaaaatcccaggggaa
taacaaaataccaagcctcaatcctggtgcaatgaaaggccaatgccagc
cttgccagagtctgccaatatccccatgccctgagaagcaaaatttggaa
gaatgtcacacataaatcaactctgggaacaagggctagtagtcccttgc
cagtcagcctggaacatctctctcctgccagtaagaaagccccattgtac
tgttctaaacaggaagtaagcaaagtcaacaaaatggtagaaggtattca
tcttacagtgcctagcctttacatcttgttgagcagcctgccacccaaat
gagacctctacatcatactggaccacaagaatgccttctttagcttgcca
ctagctcctgcttgtcagcccatgtttgccttccattggaggactcagag
tgtgggcttaatggatagccaagttgtactagatttgtacaagcattcaa
gtactcacccaccatttttaatgagacacttccatgaagacctgggtgag
tagcagcagcccactcccatataacactgttgcaatatgttgatgcccct
cataatagctaccccagataagacacttgcaatttggtaaccaccacctt
gctcagagaactgggccagat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_36559678_36560520
seq2: B6Ng01-085M07.g_71_914

seq1  GAATTCATGAGCCATGGGTAACTCTAAAGGTCTAGGGGAAGCCAATAGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGAGCCATGGGTAACTCTAAAGGTCTAGGGGAAGCCAATAGAC  50

seq1  TTCCTGGGAGACACGAGAACACAATATTCAATCTTGAAACAACCTATGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGGGAGACACGAGAACACAATATTCAATCTTGAAACAACCTATGGG  100

seq1  ACCCCTTCCCAACAAGATAACTCGGCTTCTGGGATGAGATCTGCTGACTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTTCCCAACAAGATAACTCGGCTTCTGGGATGAGATCTGCTGACTA  150

seq1  AAATGGGAGCACAAATCCACTTTGTACTTGAGAGAATGTAGGTTCTGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGGAGCACAAATCCACTTTGTACTTGAGAGAATGTAGGTTCTGTAT  200

seq1  GAAAGGGTCCCTTACACATCTTGATTATGGTACTAGAAGAAGAATATAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGGTCCCTTACACATCTTGATTATGGTACTAGAAGAAGAATATAAG  250

seq1  CTTTATGTCACATCTTCTCCAAATATTGATAAAGACCTATATCTGGAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATGTCACATCTTCTCCAAATATTGATAAAGACCTATATCTGGAGAG  300

seq1  GTTATAGGAAGAGATTCTAGGGGTACTGATGGAGAAAAATCCCAGGGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATAGGAAGAGATTCTAGGGGTACTGATGGAGAAAAATCCCAGGGGAA  350

seq1  TAACAAAATACCAAGCCTCAATCCTGGTGCAATGAAAGGCCAATGCCAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAAAATACCAAGCCTCAATCCTGGTGCAATGAAAGGCCAATGCCAGC  400

seq1  CTTGCCAGAGTCTGCCAATATCCCCATGCCCTGAGAAGCAAAATTTGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCAGAGTCTGCCAATATCCCCATGCCCTGAGAAGCAAAATTTGGAA  450

seq1  GAATGTCACACATAAATCAACTCTGGGAACAAGGGCTAGTAGTCCCTTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTCACACATAAATCAACTCTGGGAACAAGGGCTAGTAGTCCCTTGC  500

seq1  CAGTCAGCCTGGAACATCTCTCTCCTGCCAGTAAGAAAGCCCCATTGTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCAGCCTGGAACATCTCTCTCCTGCCAGTAAGAAAGCCCCATTGTAC  550

seq1  TGTTCTAAACAGGAAGTAAGCAAAGTCAACAAAATGGTAGAAGGTATTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTAAACAGGAAGTAAGCAAAGTCAACAAAATGGTAGAAGGTATTCA  600

seq1  TCTTACAGTGCCTAGCCTTTACATCTTGTTGAGCAGCCTGCCACCCAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACAGTGCCTAGCCTTTACATCTTGTTGAGCAGCCTGCCACCCAAAT  650

seq1  GAGACCTCTACATCATACTGGACCACAAGAATGCCTTCTTTAGCTTGCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACCTCTACATCATACTGGACCACAAGAATGCCTTCTTTAGCTTGCCA  700

seq1  CTAGCTCCTGCTTGTCAGCCCATGTTTGCCTTCCATTGGAGGACTCAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTCCTGCTTGTCAGCCCATGTTTGCCTTCCATTGGAGGACTCAGAG  750

seq1  TGTGGGCTTAATGGATAGCCAAGTTGTACTAGATTTGTACAAGCATTCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGCTTAATGGATAGCCAAGTTGTACTAGATTTGTACAAGCATTCAA  800

seq1  GTACTCACCCACCATTTTTAATGAGACAC-TCCATGAAGACCTG  843
      ||||||||||||||||||||||||||||| ||||||||||||||
seq2  GTACTCACCCACCATTTTTAATGAGACACTTCCATGAAGACCTG  844