BAC Information

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BAC

Clone NameB6Ng01-086C03
Chromosome2 (Build37)
Map Location 142,776,541 - 142,777,698
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-086C03.bB6Ng01-086C03.g
ACCDH899615DH899616
length1,014387
definitionDH899615|Mus musculus domesticus DNA, BAC clone: B6Ng01-086C03, 5' end.DH899616|Mus musculus domesticus DNA, BAC clone: B6Ng01-086C03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttttgccagcaccagttgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcaaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttctctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aattacaagggtgagttttgaggggaaatcactagtttaatcttcaatca
ataactggaaaattagtatcaaatccagtaaagcaaagattaaatgtggc
tatttatttcttatgtggatcttgccatatatcttttaagtacattcatc
tctaagggttttttgttgttgttcatatttactatgttatttagtaataa
taatggtacagagtaaatgcttctaaaaggacttacactatgctgataca
attgtttcaatgttcataccacaatagacacacttctgtttcaaaattag
cacaaaattataaa

tgtagaagaagggcagaaagattgtaggagtctgcaaggatggcagacac
caggagaacacagcccactgaatcaactaaggatcatttgggttcacaga
gactgaaatgggaagcacaggacctccgttgggtctttaccagattcgct
gcataacagctagcttggtgggattgtgagaatgttatctgtaggattgg
ttgtgtctttgactcgtttgcttgttcttgggactcttttcctcctatag
gattgcctcctcaagcctccgtgcaaaggcttttgccttctcttattgta
ttttgttttcttatatttggagtcctgctctttttggaagagaaatgaag
gtgagtagatctgggggagaggggatataagggggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776541_142777698
seq2: B6Ng01-086C03.b_46_743 (reverse)

seq1  TCTGGAATAACAAAAAACCTAGGATAGCAAAAAGTCTTCTCAAGGATAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAATAACAAAAAACCTAGGATAGCAAAAAGTCTTCTCAAGGATAAA  50

seq1  AGAACCTCTGGTGGAATCACCATGCCTGACCTAAAGCTTTACTACAGAGC  100
      ||||| ||||| |||||||||||||| |||||||||||||||||||||||
seq2  AGAACTTCTGGCGGAATCACCATGCCAGACCTAAAGCTTTACTACAGAGC  100

seq1  AATTGTGATAAAAACTGCATGGTACTGGTATAGAGACAGACAAGTAGACC  150
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AATTGTGATAAAAACTGCATGGTACTGGTATAGAGACAGAGAAGTAGACC  150

seq1  AATGGAATAGAATTGAAGACCCAGAAATGAACCCACACACCTATGGTCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAATAGAATTGAAGACCCAGAAATGAACCCACACACCTATGGTCAC  200

seq1  TTGATCTTCGACAAGGGAGCTAAAACCATCCAGAGGAAGAAAGACAGCAT  250
      |||||||| |||||||||||||||||||||||| ||||||||||||||||
seq2  TTGATCTTTGACAAGGGAGCTAAAACCATCCAGTGGAAGAAAGACAGCAT  250

seq1  TTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCATGTAGAAGAATGG  300
      ||||||||| ||||||||||| |||||||||||||| |||||||||||| 
seq2  TTTCAACAACTGGTGCTGGCAAAACTGGTTGTTATCGTGTAGAAGAATGC  300

seq1  GAATCGATCCATACTTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCGATCCATACTTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATC  350

seq1  AAGGAACTTCACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAACTTCACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGT  400

seq1  GGGGAAAAGCCTTGAAGATATGGGCACAGGGGACAAATTCCTGAACAGAA  450
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GGGGAAAAGCCTTGAAGATATGGGCACAGGGGAAAAATTCCTGAACAGAA  450

seq1  CAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAAATGGGACCTAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAAATGGGACCTAATG  500

seq1  AAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAG  550

seq1  ACCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGG  600

seq1  GACTAATATCCAACATATATAAAGAACTCAAGAAGGTGGACTTCAGAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAATATCCAACATATATAAAGAACTCAAGAAGGTGGACTTCAGAAAA  650

seq1  TCAAATAACCCCATTAAAAAATGGGGCTCACAAAACCATCCAGTGGAAGA  700
      |||||||||||||||||||||||||||||| ||            ||| |
seq2  TCAAATAACCCCATTAAAAAATGGGGCTCAGAA----------CTGAACA  690

seq1  AAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCATGT  750
      ||||    |||                                       
seq2  AAGA----ATTC--------------------------------------  698

seq1  AGAAGAATGCGAATCGATCCATACTTATCTCCTTGTACTAAGGTCAAATC  800
                                                        
seq2  --------------------------------------------------  698

seq1  TAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACTTATAG  850
                                                        
seq2  --------------------------------------------------  698

seq1  AGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGAAAAATTC  900
                                                        
seq2  --------------------------------------------------  698

seq1  CTGAACAGAAGAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAAATG  950
                                                        
seq2  --------------------------------------------------  698

seq1  GGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACTGTCTATA  1000
                                                        
seq2  --------------------------------------------------  698

seq1  AGACAAAAAGACCACCAACAGACTGGGAAAGGATCTTTACCTATCCTAAA  1050
                                                        
seq2  --------------------------------------------------  698

seq1  TCAGATAGGGGACTAATATCCAACATATATAAAGAACTCAAGAAGGTGGA  1100
                                                        
seq2  --------------------------------------------------  698

seq1  CCTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAACTGAACA  1150
                                                        
seq2  --------------------------------------------------  698

seq1  AAGAATTC  1158
              
seq2  --------  698


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