BAC Information

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BAC

Clone NameB6Ng01-086F06
Chromosome2 (Build37)
Map Location 177,134,525 - 177,135,298
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC627914, LOC100039093, LOC668039, LOC100039109, LOC100043381, LOC100043387, LOC100039123, LOC626877, LOC100039156, LOC100039166, 6230416C02Rik, LOC635470, LOC100043403, LOC100039198, LOC100043406
Downstream geneLOC668066, LOC621442, LOC628308, OTTMUSG00000016571, LOC100039233, LOC626802, LOC329575, LOC433515, LOC665205, OTTMUSG00000016327, LOC100039263, LOC626848, 2810021G02Rik, Phactr3, Sycp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-086F06.bB6Ng01-086F06.g
ACCDH899755DH899756
length1,160783
definitionDH899755|Mus musculus domesticus DNA, BAC clone: B6Ng01-086F06, 5' end.DH899756|Mus musculus domesticus DNA, BAC clone: B6Ng01-086F06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
gaattgcaagcttgtacaaccactctggaaatcagtctggtggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctcttctgggc
atatatccagaagatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gaatactactcagctattaaaaaaatgaatttatgaaattcctaggcaaa
taaatgaaccaggagggtatcatcctgagtgaggtaacccaatcacaaag
gaacttgcacaatatgtactcactgataagtggatattagcccagaaact
ttggatacacaagatataagatacaatttattaaactcatgaaactcaag
aaaaatgaagaccaaagtgtggacactttgccccttcctagaaatgggaa
caaaacacccatggaaggaattacagagacaaaatttggagttgtgacga
aaggatggaccatctagtgatttccatatccagggatccatcccataatc
agcttccaaaggctgacaccattgcatacactagcaagattttgctgaaa
gtacctagatatagctgtgtcttgtgagactatgccggggcctagcaaac
acagaagtggatggtcacagtcagctagtggatgggtcacatggccccaa
tggagagctagagaaagtacccatgagctaggggactgcaccctatagtg
gacacatatgactacagtacccggagctcttgtctctagctgcatatgta
tcaaagatggctatcagcatcactgaagaaagaccttgacttacaacttt
atatgctcagtacaggtacgcaaggtcaaaagggggaatgtgggaggtta
ggaatatgtg
gaattctcacctaaggaataccgaatggttgagaagcacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
aggtgctggcaaggatgtggagaaagaggaactgcagatgttaattgtat
taccaattcaaggcaattccacttttgtaatagttatggttcatcttagc
ctatagtttgactccaaagtttctctggttttactcacagctgaatatct
ctctgaattcagaggagactttgagattggcctggaaatagaatgaattt
ttacttcatatcttttagattgttgcttcctggttcttgacagtgtaact
gtatctaccctttaaaaaactaagcctatttgagatggtttatattccag
aagagactatgtagacgagtgtggcctcaaattcatgaatatgaatttgc
ctccacacttctgggattgatagcacatactatcatgctttgcgatattc
attttgaaaatgattgtaaggcactgattctaaacacctgaaatgacttt
aagactttagtgtattgtcccaaatcttaggtgctgtcttttaaatgttt
acttttgttttctctctcccccctcttttctctctctctccccctctctt
cccctctccctctcttcctcttcccctctctcccccatttccctctcttc
ctctccccctctccctctcccctctccctttcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_177134525_177135298
seq2: B6Ng01-086F06.g_70_852

seq1  GAATTCTCACCTAAGGAATACCGAATGGTTGAGAAGCACCTGAAAAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACCTAAGGAATACCGAATGGTTGAGAAGCACCTGAAAAAATG  50

seq1  TTCAGCATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGAT  100

seq1  TCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGC  150

seq1  AGGTGCTGGCAAGGATGTGGAGAAAGAGGAACTGCAGATGTTAATTGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGCTGGCAAGGATGTGGAGAAAGAGGAACTGCAGATGTTAATTGTAT  200

seq1  TACCAATTCAAGGCAATTCCACTTTTGTAATAGTTATGGTTCATCTTAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAATTCAAGGCAATTCCACTTTTGTAATAGTTATGGTTCATCTTAGC  250

seq1  CTATAGTTTGACTCCAAAGTTTCTCTGGTTTTACTCACAGCTGAATATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGTTTGACTCCAAAGTTTCTCTGGTTTTACTCACAGCTGAATATCT  300

seq1  CTCTGAATTCAGAGGAGACTTTGAGATTGGCCTGGAAATAGAATGAATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAATTCAGAGGAGACTTTGAGATTGGCCTGGAAATAGAATGAATTT  350

seq1  TTACTTCATATCTTTTAGATTGTTGCTTCCTGGTTCTTGACAGTGTAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTCATATCTTTTAGATTGTTGCTTCCTGGTTCTTGACAGTGTAACT  400

seq1  GTATCTACCCTTTAAAAAACTAAGCCTATTTGAGATGGTTTATATTCCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTACCCTTTAAAAAACTAAGCCTATTTGAGATGGTTTATATTCCAG  450

seq1  AAGAGACTATGTAGACGAGTGTGGCCTCAAATTCATGAATATGAATTTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGACTATGTAGACGAGTGTGGCCTCAAATTCATGAATATGAATTTGC  500

seq1  CTCCACACTTCTGGGATTGATAGCACATACTATCATGCTTTGCGATATTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACACTTCTGGGATTGATAGCACATACTATCATGCTTTGCGATATTC  550

seq1  ATTTTGAAAATGATTGTAAGGCACTGATTCTAAACACCTGAAATGACTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGAAAATGATTGTAAGGCACTGATTCTAAACACCTGAAATGACTTT  600

seq1  AAGAC-TTAGTGTATTGTCCCAAATCTTAGGTGCTGTC-TTTAAATG-TT  647
      ||||| |||||||||||||||||||||||||||||||| |||||||| ||
seq2  AAGACTTTAGTGTATTGTCCCAAATCTTAGGTGCTGTCTTTTAAATGTTT  650

seq1  ACTTT--GTTTCTCTCT-CCCCCTC-TTTCTCTCTCTCTCCCCCTCTCTT  693
      |||||   ||||||||| ||||||| ||||||||||||||||||||||||
seq2  ACTTTTGTTTTCTCTCTCCCCCCTCTTTTCTCTCTCTCTCCCCCTCTCTT  700

seq1  CCCCTCTCCCTCTCTTCCTCTTCCCCTCTCTCCCCCA-TTCCCTCTCTTC  742
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CCCCTCTCCCTCTCTTCCTCTTCCCCTCTCTCCCCCATTTCCCTCTCTTC  750

seq1  CTCTCCCCCTCTCCCTCT-CCCTCTCCCTTTCC  774
      |||||||||||||||||| ||||||||||||||
seq2  CTCTCCCCCTCTCCCTCTCCCCTCTCCCTTTCC  783