BAC Information

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BAC

Clone NameB6Ng01-091B02
Chromosome2 (Build37)
Map Location 32,089,913 - 32,244,083
singlet/doubletdoublet
Overlap gene5830434P21Rik, Pomt1, Uck1, LOC622534, 2900010J23Rik, Golga2, Dnm1, Ciz1, 1110008P14Rik, Lcn2
Upstream geneFreq, LOC622345, LOC670182, LOC665700, BC034076, Ass1, Fubp3, LOC100041465, Prdm12, Exosc2, Abl1, BC094274, Fibcd1, Lamc3, 2810003C17Rik, Nup214, A130092J06Rik, LOC100040058, Ppapdc3
Downstream genePtges2, LOC100041671, Slc25a25, 4933440H19Rik, C230093N12Rik, Dpm2, Pip5kl1, St6galnac4, St6galnac6, Ak1, Eng, Fpgs, Cdk9, Sh2d3c, Tor2a, Ttc16, Ptrh1, 1700019L03Rik, Stxbp1, 9130404D14Rik, Lrsam1, Snora65, Slc2a8, Garnl3, Ralgps1, Angptl2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091B02.bB6Ng01-091B02.g
ACCDH903201DH903202
length1,148415
definitionDH903201|Mus musculus domesticus DNA, BAC clone: B6Ng01-091B02, 5' end.DH903202|Mus musculus domesticus DNA, BAC clone: B6Ng01-091B02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,089,913 - 32,091,069)(32,243,663 - 32,244,083)
sequence
gaattcaccctcccttccctccgggtcagtccctgttgtttctcctttca
aatatgtgattgtactaggtctttccatacgaaagaactctccttattta
aataaaaaaaaagtataaaaaaataaagccaaacatgctttctcaggctg
tgtcggttttctatcatctggaagagtacggctggcgcactgcttcccgg
gagactgggagtggccagaataccttagggagcgcagcactgtgctgtgg
tggtgttcccaaggctcacctaggcagccatcccaagaacagctttttct
atgacttttgcctttgtcttccattaattggttattttaaaaccttaaga
caggattcgaaagatgtcctcggtgtggagggaaggcgacttgggtaaac
ggagcaaggtctcaagcaatttagcagggactaggacacatgtctttcct
tcagggtctctgagaaggctaagcacggaaggggttgcagatcatacaaa
ttaatatatattcaaagacattagttggtctacatggacatttttttctt
tacactgggcctcaggaaccccctaccacaacaggcagcctgtggttaag
gcacatctcgaaaatgggcagcaccaagaagccttgtcctctctgtgggc
caacccatgaccatcctatcctgtacttcctgcctgattgctatctgggt
ttctataggaacaagtggaggactgcactgtacttctgtggaagaaaaaa
ttagatctggggcaggaaaggtcagggggattcatatagataggttcagg
ctcagtcatcactgaggcctggaacctaggtacagggctgtcgggacatt
ttatttatcaaatgtcatttgttaacactagtgaagggtggtgtggattc
agaagtcactggtgagcatacagtgtaggccagccagcattacaaaaaaa
aaacaaagtgccaaaggcagtgcatgagaaatcccagtcccccaggcata
gcctctgctacagaacaggcaagggtctgggttagtagcatccactagct
taaagccacatacatacctcaggtttcagcaggcacacaatttcctcttg
gagctgaagtgccacgagctgttctgagacacagcttgacttactgat
caggacagccagggctatacagagaaaccctgtcttgaaaaaaaaagaga
aagaaaaaagaaaaaaaaaaatgaaagcagccacatctaaggactacgtg
gcacaggagagggtgagtccctgagagttcagctgctgccctgtctgttc
ctgtaaatggcagtggggtcatgggaaagtgaaggggctcaaggtattgg
acacttccaggataatcttttggacgcctcaccctgtgccaggaccaagg
ctgagcttggcaggctcagaacagggtgtcctgttcttccctgtctaaaa
cattcactctcagcttgctcacccttccccagacaaggaagctgcacagg
gtctggtgttcagatggctttggcttacagcaggtgtgggtgtggggtag
gaggcagggggtagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_32089913_32091069
seq2: B6Ng01-091B02.b_48_1195

seq1  GAATTCACCCTCCCTTCCCTCCGGGTCAGTCCCTGTTGTTTCTCCTTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCCTCCCTTCCCTCCGGGTCAGTCCCTGTTGTTTCTCCTTTCA  50

seq1  AATATGTGATTGTACTAGGTCTTTCCATACGAAAGAACTCTCCTTATTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGTGATTGTACTAGGTCTTTCCATACGAAAGAACTCTCCTTATTTA  100

seq1  AATAAAAAAAAAGTATAAAAAAATAAAGCCAAACATGCTTTCTCAGGCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAAAAAAAGTATAAAAAAATAAAGCCAAACATGCTTTCTCAGGCTG  150

seq1  TGTCGGTTTTCTATCATCTGGAAGAGTACGGCTGGCGCACTGCTTCCCGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCGGTTTTCTATCATCTGGAAGAGTACGGCTGGCGCACTGCTTCCCGG  200

seq1  GAGACTGGGAGTGGCCAGAATACCTTAGGGAGCGCAGCACTGTGCTGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTGGGAGTGGCCAGAATACCTTAGGGAGCGCAGCACTGTGCTGTGG  250

seq1  TGGTGTTCCCAAGGCTCACCTAGGCAGCCATCCCAAGAACAGCTTTTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTTCCCAAGGCTCACCTAGGCAGCCATCCCAAGAACAGCTTTTTCT  300

seq1  ATGACTTTTGCCTTTGTCTTCCATTAATTGGTTATTTTAAAACCTTAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTTTTGCCTTTGTCTTCCATTAATTGGTTATTTTAAAACCTTAAGA  350

seq1  CAGGATTCGAAAGATGTCCTCGGTGTGGAGGGAAGGCGACTTGGGTAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATTCGAAAGATGTCCTCGGTGTGGAGGGAAGGCGACTTGGGTAAAC  400

seq1  GGAGCAAGGTCTCAAGCAATTTAGCAGGGACTAGGACACATGTCTTTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCAAGGTCTCAAGCAATTTAGCAGGGACTAGGACACATGTCTTTCCT  450

seq1  TCAGGGTCTCTGAGAAGGCTAAGCACGGAAGGGGTTGCAGATCATACAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGTCTCTGAGAAGGCTAAGCACGGAAGGGGTTGCAGATCATACAAA  500

seq1  TTAATATATATTCAAAGACATTAGTTGGTCTACATGGACATTTTTTTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATATATATTCAAAGACATTAGTTGGTCTACATGGACATTTTTTTCTT  550

seq1  TACACTGGGCCTCAGGAACCCCCTACCACAACAGGCAGCCTGTGGTTAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTGGGCCTCAGGAACCCCCTACCACAACAGGCAGCCTGTGGTTAAG  600

seq1  GCACATCTCGAAAATGGGCAGCACCAAGAAGCCTTGTCCTCTCTGTGGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATCTCGAAAATGGGCAGCACCAAGAAGCCTTGTCCTCTCTGTGGGC  650

seq1  CAACCCATGACCATCCTATCCTGTACTTCCTGCCTGATTGCTATCTGGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCCATGACCATCCTATCCTGTACTTCCTGCCTGATTGCTATCTGGGT  700

seq1  TTCTATAGGAACAAGTGGAGGACTGCACTGTACTTCTGTGGAAGAAAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATAGGAACAAGTGGAGGACTGCACTGTACTTCTGTGGAAGAAAAAA  750

seq1  TTAGATCTGGGGCAGGAAAGGTCAGGGGGATTCATATAGATAGGTTCAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATCTGGGGCAGGAAAGGTCAGGGGGATTCATATAGATAGGTTCAGG  800

seq1  CTCAGTCATCACTGAGGCCTGGAACCTAGGTACAGGGCTGTCGGGACATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTCATCACTGAGGCCTGGAACCTAGGTACAGGGCTGTCGGGACATT  850

seq1  TTATTTATCAAATGTCATTTGTTAACACTAGTGAAGGGTGGTGTGGATTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTATCAAATGTCATTTGTTAACACTAGTGAAGGGTGGTGTGGATTC  900

seq1  AGAAGTCACTGGTGAGCATACAGTTGTAGGCCAGCCAGCATTACAAAAAA  950
      ||||||||||||||||||||||| |||||||||||||||||||| |||||
seq2  AGAAGTCACTGGTGAGCATACAG-TGTAGGCCAGCCAGCATTAC-AAAAA  948

seq1  AAAAACAAAGTGCCAAAGGCAGTGCATGAGAAATCCCAGTCCCCCAGGCA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAAAGTGCCAAAGGCAGTGCATGAGAAATCCCAGTCCCCCAGGCA  998

seq1  TAAGCCTCTTGCTACAGAACAGGCAAGGGTCTGGG-TAGTAGCATCCACT  1049
      | |||||| |||||||||||||||||||||||||| ||||||||||||||
seq2  T-AGCCTC-TGCTACAGAACAGGCAAGGGTCTGGGTTAGTAGCATCCACT  1046

seq1  AGCTTTTAAAGCCACATACATACCTCAGGTTTCCAGCAAGCAACACAATT  1099
      |||  ||||||||||||||||||||||||||| ||||| || ||||||||
seq2  AGC--TTAAAGCCACATACATACCTCAGGTTT-CAGCAGGC-ACACAATT  1092

seq1  TCCTCCTGAAGCTG-AGTGCCCACGAGCTGTCCTGAAGCACCAGCATGAC  1148
      ||||| || ||||| |||| ||||||||||| ||||  || |||| ||||
seq2  TCCTCTTGGAGCTGAAGTG-CCACGAGCTGTTCTGAGACA-CAGCTTGAC  1140

seq1  TTACATGAT  1157
      |||| ||||
seq2  TTAC-TGAT  1148

seq1: chr2_32243663_32244083
seq2: B6Ng01-091B02.g_67_487 (reverse)

seq1  CCTACCCCCTGCCTCCTACCCCACACCCACACCTGCTGTAAGCCAAAGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACCCCCTGCCTCCTACCCCACACCCACACCTGCTGTAAGCCAAAGCC  50

seq1  ATCTGAACACCAGACCCTGTGCAGCTTCCTTGTCTGGGGAAGGGTGAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAACACCAGACCCTGTGCAGCTTCCTTGTCTGGGGAAGGGTGAGCA  100

seq1  AGCTGAGAGTGAATGTTTTAGACAGGGAAGAACAGGACACCCTGTTCTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAGAGTGAATGTTTTAGACAGGGAAGAACAGGACACCCTGTTCTGA  150

seq1  GCCTGCCAAGCTCAGCCTTGGTCCTGGCACAGGGTGAGGCGTCCAAAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCCAAGCTCAGCCTTGGTCCTGGCACAGGGTGAGGCGTCCAAAAGA  200

seq1  TTATCCTGGAAGTGTCCAATACCTTGAGCCCCTTCACTTTCCCATGACCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCCTGGAAGTGTCCAATACCTTGAGCCCCTTCACTTTCCCATGACCC  250

seq1  CACTGCCATTTACAGGAACAGACAGGGCAGCAGCTGAACTCTCAGGGACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCCATTTACAGGAACAGACAGGGCAGCAGCTGAACTCTCAGGGACT  300

seq1  CACCCTCTCCTGTGCCACGTAGTCCTTAGATGTGGCTGCTTTCATTTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTCTCCTGTGCCACGTAGTCCTTAGATGTGGCTGCTTTCATTTTTT  350

seq1  TTTTTCTTTTTTCTTTCTCTTTTTTTTTCAAGACAGGGTTTCTCTGTATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTTTTTTCTTTCTCTTTTTTTTTCAAGACAGGGTTTCTCTGTATA  400

seq1  GCCCTGGCTGTCCTGGAATTC  421
      |||||||||||||||||||||
seq2  GCCCTGGCTGTCCTGGAATTC  421