BAC Information

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BAC

Clone NameB6Ng01-091I17
Chromosome2 (Build37)
Map Location 98,480,526 - 98,481,601
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC621146, LOC664974, LOC100042886
Downstream geneLOC621386
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091I17.bB6Ng01-091I17.g
ACCDH903539DH903540
length1,1071,036
definitionDH903539|Mus musculus domesticus DNA, BAC clone: B6Ng01-091I17, 5' end.DH903540|Mus musculus domesticus DNA, BAC clone: B6Ng01-091I17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactaatgaagctatctggatatagacttttcattgtctttggtt
aaatttttttctattctactctactcaagcttaggctcattgccaacaag
gtataattcattttagcaatctttttagttttggttgatcccaaaataga
cattttatgtgagtccacctttttttctggccaaaaatgatagcctatga
attaacctgctcttccagagataacaagggtttttataagtacttattgt
caaaattttagtttgctaaatctttgagcttgaccttctcaaatgcaaat
caattggaccatcttctcaatttttatgaggtgcagttcctggaaaatgt
ggaaactatctctggcgcactacttccaaaatgtggggtggaaaattgct
cactgctcttagaacaagatttagagaaagcaatgacataagtgtagtgg
agtctgatagtctcacctttcctgagtcaacatagatctttcatgttgcc
gtcaagcaaagatagtataatcaaatcatgaattaacttagtctgccata
agtagaccgtctaatgaaataattaattctgggaggagtaattgaccact
gatttgtcagttagaatataatgtgctcaaaatgctagtaaagcaatgta
gttaattcttcacatcttgccttatattgcctagaatttgtggggagaag
aaattgcatttctttgtccagagtttcttcagtgcttgcttaatatttct
atgatgccagccatttcctttctcctacttcatcttaggggatttcttaa
tatgtgtatatttgtttcaattgtaacattatttatttgtattttatcaa
tttttatacatcaggtaacattacatataaagattttccattctgttttg
gctttcattatgggaaaaacatttatgggtttattgtgctaagttcatat
tttcatattttcatataacatttcaataaacaatttctttgtcatctgat
gccaatggttcatttataaatgatttacatctctttttctagttgcatga
aaaaatgtcccattatctcactcatttataggatgaccttccatccgaaa
gaatgac
gaattcctttggctaagacttcaagtataatgctgaataggtagagagaa
agtgggcagcctggtctagtccctgattttagtgagactgcttccagctt
ctcaccatttactttgatgttggctacttgtttgctgtaattgcttttat
catgtttaggtatgggccttgaattcctgatctttacaagacttttatca
tgtatgggtgttggattttgttaaatgctttctctgcatctaaagagatg
atcatgtggtttttgtctttgagtttgtttatataatggattatgttgat
ggattttcacatattaaaccattcctgcaatcctggaatgaaacctactt
ggtcaggatgatcgttttgatgtgtttttggatttggttagcaagaattt
tattgagtatttctgcatcaatattcataagggaaattggtctgaagttc
tctatcattgttgggtctcctgtgtatcagaaagtaattgtgggatcaga
gttattgtggcttcatagaatgaattgggtagagtaccttctgcttctca
ttgtggaatagtttgtgaagaactggacttacatctttgaaggtctgata
gaactctgccctaaacctatctggtcctgggctttttttttttttttttt
tttttttttttttttttatttgggagactattaatgtgtgcttctatttc
tttaggagatataggactgtttagatcattaacctgatcctgatttaact
ttgttacctggcatctgtctacaacttgtccatttcatccaggctcttcc
agttttgttgataatagtcttttgtagaaggatctgatggtgtttgaatt
tcttagaatctgttgttatgtcctctttcattcttagtttgctaataaga
tgctgtcctggagccctctagtgactctgcctaaggtatcatctgttatt
tctaaaaaaaaccagctccctcattgtgatcttgaagtcctctgttccac
ccgctgatcgtcctgattgatatatgcctgctaccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_98480526_98481601
seq2: B6Ng01-091I17.b_95_1154 (reverse)

seq1  GTCATATCTTTCTGAATGGAAAGGTCAATCACATATAAATAGATGTAGAT  50
      ||||| |||||| | |||| |||||||    | ||||||| ||   ||||
seq2  GTCAT-TCTTTC-GGATGG-AAGGTCA---TCCTATAAAT-GAGTGAGAT  43

seq1  AATGGGGACATATATTACATGCAAACTAGAAAAAGGAAGATGTAAAATCA  100
      ||| ||||||| | || ||||| ||||||||||||  |||||| ||||||
seq2  AAT-GGGACAT-TTTTTCATGC-AACTAGAAAAAG--AGATGT-AAATCA  87

seq1  TTTATAAATTGAAACCATTGGCATCAGATGACAAAGAAATGGTATATTGA  150
      |||||||||   |||||||||||||||||||||||||||| || ||||| 
seq2  TTTATAAAT--GAACCATTGGCATCAGATGACAAAGAAATTGTTTATTG-  134

seq1  AAATGTTATATGAAAATATGAAAATATGAACTTAGCACAATAAAACCATA  200
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AAATGTTATATGAAAATATGAAAATATGAACTTAGCACAATAAACCCATA  184

seq1  AATGTTCTT-CCATAATGAAAGCCAAAACAGAATGGGAAAATCTTTATAT  249
      |||||| || |||||||||||||||||||||||| |||||||||||||||
seq2  AATGTTTTTCCCATAATGAAAGCCAAAACAGAAT-GGAAAATCTTTATAT  233

seq1  GTAATGTTACCTGATGTATAAAAATTGATAAAATACAAATAAATAATGTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATGTTACCTGATGTATAAAAATTGATAAAATACAAATAAATAATGTT  283

seq1  ACAATTGAAACAAATATACACATATTAAGAAATCCCCTAAGATGAAGTAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTGAAACAAATATACACATATTAAGAAATCCCCTAAGATGAAGTAG  333

seq1  GAGAAAGGAAATGGCTGGCATCATAGAAATATTAAGCAAGCACTGAAGAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAGGAAATGGCTGGCATCATAGAAATATTAAGCAAGCACTGAAGAA  383

seq1  ACTCTGGACAAAGAAATGCAATTTCTTCTCCCCACAAATTCTAGGCAATA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGGACAAAGAAATGCAATTTCTTCTCCCCACAAATTCTAGGCAATA  433

seq1  TAAGGCAAGATGTGAAGAATTAACTACATTGCTTTACTAGCATTTTGAGC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGCAAGATGTGAAGAATTAACTACATTGCTTTACTAGCATTTTGAGC  483

seq1  ACATTATATTCTAACTGACAAATCAGTGGTCAATTACTCCTCCCAGAATT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTATATTCTAACTGACAAATCAGTGGTCAATTACTCCTCCCAGAATT  533

seq1  AATTATTTCATTAGACGGTCTACTTATGGCAGACTAAGTTAATTCATGAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTTCATTAGACGGTCTACTTATGGCAGACTAAGTTAATTCATGAT  583

seq1  TTGATTATACTATCTTTGCTTGACGGCAACATGAAAGATCTATGTTGACT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTATACTATCTTTGCTTGACGGCAACATGAAAGATCTATGTTGACT  633

seq1  CAGGAAAGGTGAGACTATCAGACTCCACTACACTTATGTCATTGCTTTCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAAGGTGAGACTATCAGACTCCACTACACTTATGTCATTGCTTTCT  683

seq1  CTAAATCTTGTTCTAAGAGCAGTGAGCAATTTTCCACCCCACATTTTGGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATCTTGTTCTAAGAGCAGTGAGCAATTTTCCACCCCACATTTTGGA  733

seq1  AGTAGTGCGCCAGAGATAGTTTCCACATTTTCCAGGAACTGCACCTCATA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTGCGCCAGAGATAGTTTCCACATTTTCCAGGAACTGCACCTCATA  783

seq1  AAAATTGAGAAGATGGTCCAATTGATTTGCATTTGAGAAGGTCAAGCTCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTGAGAAGATGGTCCAATTGATTTGCATTTGAGAAGGTCAAGCTCA  833

seq1  AAGATTTAGCAAACTAAAATTTTGACAATAAGTACTTATAAAAACCCTTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTTAGCAAACTAAAATTTTGACAATAAGTACTTATAAAAACCCTTG  883

seq1  TTATCTCTGGAAGAGCAGGTTAATTCATAGGCTATCATTTTTGGCCAGAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTCTGGAAGAGCAGGTTAATTCATAGGCTATCATTTTTGGCCAGAA  933

seq1  AAAAAGGTGGACTCACATAAAATGTCTATTTTGGGATCAACCAAAACTAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGGTGGACTCACATAAAATGTCTATTTTGGGATCAACCAAAACTAA  983

seq1  AAAGATTGCTAAAATGAATTATACCTTGTTGGCAATGAGCCTAAGCTTGA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATTGCTAAAATGAATTATACCTTGTTGGCAATGAGCCTAAGCTTGA  1033

seq1  GTAGAGTAGAATAGAAAAAAATTTAAC  1076
      |||||||||||||||||||||||||||
seq2  GTAGAGTAGAATAGAAAAAAATTTAAC  1060