BAC Information

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BAC

Clone NameB6Ng01-092B23
Chromosome2 (Build37)
Map Location 32,836,084 - 32,972,283
singlet/doubletdoublet
Overlap geneSlc2a8, Garnl3
Upstream geneNup214, A130092J06Rik, LOC100040058, Ppapdc3, 5830434P21Rik, Pomt1, Uck1, LOC622534, 2900010J23Rik, Golga2, Dnm1, Ciz1, 1110008P14Rik, Lcn2, Ptges2, LOC100041671, Slc25a25, 4933440H19Rik, C230093N12Rik, Dpm2, Pip5kl1, St6galnac4, St6galnac6, Ak1, Eng, Fpgs, Cdk9, Sh2d3c, Tor2a, Ttc16, Ptrh1, 1700019L03Rik, Stxbp1, 9130404D14Rik, Lrsam1, Snora65
Downstream geneRalgps1, Angptl2, Zbtb34, Zbtb43, LOC676764, Lmx1b, LOC100041918, 2610528K11Rik, LOC100041931
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-092B23.bB6Ng01-092B23.g
ACCDH903968DH903969
length1,0771,014
definitionDH903968|Mus musculus domesticus DNA, BAC clone: B6Ng01-092B23, 5' end.DH903969|Mus musculus domesticus DNA, BAC clone: B6Ng01-092B23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,836,084 - 32,837,161)(32,971,261 - 32,972,283)
sequence
gaattcctgatcttcatgtatttaaccctcaagtgttgggattacaggca
tgtgccaccaggcccagcccagcacacatttaatatgcacagatgtgagt
tagaacgaaagacttctcccttgctgtctgatgtgtccttgttcagccca
gtcctaacaggggtgccatcacttctaatctcaggagtcactagacatta
tccatacatacttctagattatcctatactttatgctctagtaaaaacaa
acaaacacaaaacaaaaacaacccacaggtccccagtctccctttcctct
agctccttcacgcctccaacagatgaagaggataagcaggaggccatgga
agtgaaggagggatgggtggtcatccaagtgtgtagccacaggttgctgg
tgaccctcagttgctagggtctaaatcttttcagacactatcccgggcca
gcagtttcctgtgcaaaggccgaaaccacctcgggactaggccttacttt
acaggggggcactgaggctgggagagaagcctgtgtccaggtaagtggtc
caggtgtgtgggctgcaaggtatatgtagccttcactgcaagcagtgaag
ggagcctgcagcctatcctagggacaaaccagagtagaactgcccagtta
acaagaaaataggggcattcccgttatcgctgcctagcatacagtgacac
caccatagtagagtaaaagatcagtaaggaactgcctcgctgctgaccgg
ctgccccctgcctggcaaaggtcatctaggaggctcaaaccactcaccgg
tgccactagtgaggcgactccgcaggcaaggccggtgaggaggcggcctt
ccgagcagcatccacacatcccgggccgcggtgatgacagcaaagccagt
cacgaagggcacggtgcagagcaagaggctcagcttgcgccctgcacggt
caaggagccagccgcccagtaatgctccctgcagcagcgcctaggtcacg
acgacctgggacccggacggtctgtagaaggagccaccaggggtcatgtc
tacgattcttccaccccactgccccct
gaattcaaatggtgtggaagagaattgaagcgcaaaagggaacccatgtg
ggtaaagttaggttgaaatggaaatggtggctttcaaagagatactcttg
tcaggtctttaaaataaaatatttaaggagctagaaagtagtatgttgga
atgttcccaatattataaaatttaaaagctaagagaatatccatgtagta
gtatctctttctgtaacattccatgtctggtccatatttgtattgacgtt
taagatcttgggtgtgaacagaagaacaaatacagtaaataaaaacaata
gtccccgagtatcagagagtgccagcaaagatcaaagattccagtaagga
aagcaaacttcagataaacagaatgccatcaatattctcagtctttcaag
tggccttagcatttctgtgttctccacacctgcctctaccttctcaacac
atctccaccatccacagagcacctcctcacactggcagctgccttgcctg
cttgccagagagctctgagcactggagtgttacatcactgccagctgtag
ctgtcctggctagttttatgtcaacttgacacaagctagagtcattaggg
aaaatatatttttcaattgagaaaatgtctgcataagattgcctgtaggc
aagtttgtagtaagttttttagtgattgatgtgggaaggttcaggctgta
ggtagtgccatccctaggcaggtgatcttggagtgtataatgaagcagac
taagcaagccaatacacagcactcctcccaggcctctgtatcagttcttg
ccttgattcctgctttgggtgatggattgattataagttaaatataaacc
ctttactcccgaggtatttttggtcattgtgttgtcacaaaataagagca
ccacagatacagaattgttacctggatagagcattgatataacatatggc
catgtttcagaaggatgtgaaaaacctagtagtttgggatggggaagata
aaatacctccctta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_32836084_32837161
seq2: B6Ng01-092B23.b_42_1118

seq1  GAATTCCTGATCTTCATGTATTTAACCCTCAAGTGTTGGGATTACAGGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGATCTTCATGTATTTAACCCTCAAGTGTTGGGATTACAGGCA  50

seq1  TGTGCCACCAGGCCCAGCCCAGCACACATTTAATATGCACAGATGTGAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCACCAGGCCCAGCCCAGCACACATTTAATATGCACAGATGTGAGT  100

seq1  TAGAACGAAAGACTTCTCCCTTGCTGTCTGATGTGTCCTTGTTCAGCCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACGAAAGACTTCTCCCTTGCTGTCTGATGTGTCCTTGTTCAGCCCA  150

seq1  GTCCTAACAGGGGTGCCATCACTTCTAATCTCAGGAGTCACTAGACATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTAACAGGGGTGCCATCACTTCTAATCTCAGGAGTCACTAGACATTA  200

seq1  TCCATACATACTTCTAGATTATCCTATACTTTATGCTCTAGTAAAAACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATACATACTTCTAGATTATCCTATACTTTATGCTCTAGTAAAAACAA  250

seq1  ACAAACACAAAACAAAAACAACCCACAGGTCCCCAGTCTCCCTTTCCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACACAAAACAAAAACAACCCACAGGTCCCCAGTCTCCCTTTCCTCT  300

seq1  AGCTCCTTCACGCCTCCAACAGATGAAGAGGATAAGCAGGAGGCCATGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCTTCACGCCTCCAACAGATGAAGAGGATAAGCAGGAGGCCATGGA  350

seq1  AGTGAAGGAGGGATGGGTGGTCATCCAAGTGTGTAGCCACAGGTTGCTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAAGGAGGGATGGGTGGTCATCCAAGTGTGTAGCCACAGGTTGCTGG  400

seq1  TGACCCTCAGTTGCTAGGGTCTAAATCTTTTCAGACACTATCCCGGGCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCCTCAGTTGCTAGGGTCTAAATCTTTTCAGACACTATCCCGGGCCA  450

seq1  GCAGTTTCCTGTGCAAAGGCCGAAACCACCTCGGGACTAGGCCTTACTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTTCCTGTGCAAAGGCCGAAACCACCTCGGGACTAGGCCTTACTTT  500

seq1  ACAGGGGGGCACTGAGGCTGGGAGAGAAGCCTGTGTCCAGGTAAGTGGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGGGGCACTGAGGCTGGGAGAGAAGCCTGTGTCCAGGTAAGTGGTC  550

seq1  CAGGTGTGTGGGCTGCAAGGTATATGTAGCCTTCACTGCAAGCAGTGAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGTGTGGGCTGCAAGGTATATGTAGCCTTCACTGCAAGCAGTGAAG  600

seq1  GGAGCCTGCAGCCTATCCTAGGGACAAACCAGAGTAGAACTGCCCAGTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCCTGCAGCCTATCCTAGGGACAAACCAGAGTAGAACTGCCCAGTTA  650

seq1  ACAAGAAAATAGGGGCATTCCCGTTATCGCTGCCTAGCATACAGTGACAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAAAATAGGGGCATTCCCGTTATCGCTGCCTAGCATACAGTGACAC  700

seq1  CACCATAGTAGAGTAAAAGATCAGTAAGGAACTGCCTCGCTGCTGACCGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATAGTAGAGTAAAAGATCAGTAAGGAACTGCCTCGCTGCTGACCGG  750

seq1  CTGCCCCCTGCCTGGCAAAGGTCATCTAGGAGGCTCAAACCACTCACCGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCCCTGCCTGGCAAAGGTCATCTAGGAGGCTCAAACCACTCACCGG  800

seq1  TGCCACTAGTGAGGCGACTCCGCAGGCAAGGCCGGTGAGGAGGCGGCC-T  849
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TGCCACTAGTGAGGCGACTCCGCAGGCAAGGCCGGTGAGGAGGCGGCCTT  850

seq1  CCGAGCAGCATCCACACATCCCGGGCCGCGGTGATGACAGCAAAGCCAGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGCAGCATCCACACATCCCGGGCCGCGGTGATGACAGCAAAGCCAGT  900

seq1  CACGAAGGGCACGGTGCAGAGCAAGAGGCTCAGCTTGCGCCCTGCACGGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGAAGGGCACGGTGCAGAGCAAGAGGCTCAGCTTGCGCCCTGCACGGT  950

seq1  CCAGGAGCCAGCCGCCCAGT-ATGCCCCCTGCAGCAGCGCCCAGGGTCAC  998
      | |||||||||||||||||| |||| ||||||||||||||| | ||||||
seq2  CAAGGAGCCAGCCGCCCAGTAATGCTCCCTGCAGCAGCGCCTA-GGTCAC  999

seq1  GACGGCCTGGGGACCCGGGACGGGCTGAAGAGGAGGCCACCAGGGGCCAT  1048
      |||| ||| ||||||| |||||| ||| ||| |  ||||||||||| |||
seq2  GACGACCT-GGGACCC-GGACGGTCTGTAGAAGGAGCCACCAGGGGTCAT  1047

seq1  GGCCCACGATCCTTCCACCCCAC-GCCCCCT  1078
       | | ||||| |||||||||||| |||||||
seq2  -GTCTACGATTCTTCCACCCCACTGCCCCCT  1077

seq1: chr2_32971261_32972283
seq2: B6Ng01-092B23.g_69_1082 (reverse)

seq1  TAAGGGA-GTATTTTATACTTCCCCATCCCAAACTTCTA-GTTTTTCACA  48
      ||||||| ||||||||| ||||||||||||||||| ||| ||||||||| 
seq2  TAAGGGAGGTATTTTAT-CTTCCCCATCCCAAACTACTAGGTTTTTCAC-  48

seq1  ATCCTTCCTGAAACATGGCCATTCTGTTATATCAATGCTCTATTCCAGGT  98
      |||||| |||||||||||||| | |||||||||||||||||| |||||||
seq2  ATCCTT-CTGAAACATGGCCA-TATGTTATATCAATGCTCTA-TCCAGGT  95

seq1  ACCAATTTCTGTATCTGTTGTTGCTCTTAATTCTGTGACAAACACAATGA  148
      | ||| ||||||||||| || ||||||| ||| |||||| ||||||||||
seq2  AACAA-TTCTGTATCTG-TGGTGCTCTT-ATTTTGTGAC-AACACAATGA  141

seq1  CCAAAAATAACTCGGGAAGTAAAGGGTTTATTTTATAACTTATAATCAAT  198
      ||||||||| |||||| |||||||||||||| || |||||||||||||||
seq2  CCAAAAATACCTCGGG-AGTAAAGGGTTTATATT-TAACTTATAATCAAT  189

seq1  CCATCACCCAAAGCAGGAATCAAGGCAAGAACTGATACAGAGGCCTGGGA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCACCCAAAGCAGGAATCAAGGCAAGAACTGATACAGAGGCCTGGGA  239

seq1  GGAGTGCTGTGTATTGGCTTGCTTAGTCTGCTTCATTATACACTCCAAGA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGCTGTGTATTGGCTTGCTTAGTCTGCTTCATTATACACTCCAAGA  289

seq1  TCACCTGCCTAGGGATGGCACTACCTACAGCCTGAACCTTCCCACATCAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTGCCTAGGGATGGCACTACCTACAGCCTGAACCTTCCCACATCAA  339

seq1  TCACTAAAAAACTTACTACAAACTTGCCTACAGGCAATCTTATGCAGACA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTAAAAAACTTACTACAAACTTGCCTACAGGCAATCTTATGCAGACA  389

seq1  TTTTCTCAATTGAAAAATATATTTTCCCTAATGACTCTAGCTTGTGTCAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCAATTGAAAAATATATTTTCCCTAATGACTCTAGCTTGTGTCAA  439

seq1  GTTGACATAAAACTAGCCAGGACAGCTACAGCTGGCAGTGATGTAACACT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGACATAAAACTAGCCAGGACAGCTACAGCTGGCAGTGATGTAACACT  489

seq1  CCAGTGCTCAGAGCTCTCTGGCAAGCAGGCAAGGCAGCTGCCAGTGTGAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGCTCAGAGCTCTCTGGCAAGCAGGCAAGGCAGCTGCCAGTGTGAG  539

seq1  GAGGTGCTCTGTGGATGGTGGAGATGTGTTGAGAAGGTAGAGGCAGGTGT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTGCTCTGTGGATGGTGGAGATGTGTTGAGAAGGTAGAGGCAGGTGT  589

seq1  GGAGAACACAGAAATGCTAAGGCCACTTGAAAGACTGAGAATATTGATGG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAACACAGAAATGCTAAGGCCACTTGAAAGACTGAGAATATTGATGG  639

seq1  CATTCTGTTTATCTGAAGTTTGCTTTCCTTACTGGAATCTTTGATCTTTG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTGTTTATCTGAAGTTTGCTTTCCTTACTGGAATCTTTGATCTTTG  689

seq1  CTGGCACTCTCTGATACTCGGGGACTATTGTTTTTATTTACTGTATTTGT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCACTCTCTGATACTCGGGGACTATTGTTTTTATTTACTGTATTTGT  739

seq1  TCTTCTGTTCACACCCAAGATCTTAAACGTCAATACAAATATGGACCAGA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTGTTCACACCCAAGATCTTAAACGTCAATACAAATATGGACCAGA  789

seq1  CATGGAATGTTACAGAAAGAGATACTACTACATGGATATTCTCTTAGCTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAATGTTACAGAAAGAGATACTACTACATGGATATTCTCTTAGCTT  839

seq1  TTAAATTTTATAATATTGGGAACATTCCAACATACTACTTTCTAGCTCCT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTTTATAATATTGGGAACATTCCAACATACTACTTTCTAGCTCCT  889

seq1  TAAATATTTTATTTTAAAGACCTGACAAGAGTATCTCTTTGAAAGCCACC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATTTTATTTTAAAGACCTGACAAGAGTATCTCTTTGAAAGCCACC  939

seq1  ATTTCCATTTCAACCTAACTTTACCCACATGGGTTCCCTTTTGCGCTTCA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCATTTCAACCTAACTTTACCCACATGGGTTCCCTTTTGCGCTTCA  989

seq1  ATTCTCTTCCACACCATTTGAATTC  1023
      |||||||||||||||||||||||||
seq2  ATTCTCTTCCACACCATTTGAATTC  1014