BAC Information

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BAC

Clone NameB6Ng01-093A23
Chromosome2 (Build37)
Map Location 89,633,113 - 89,634,185
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr1201, Olfr1202, Olfr1203, Olfr1204, Olfr1206, Olfr1208, Olfr1209, Olfr1211, Olfr1212, Olfr1213, Olfr1214, Olfr1215, Olfr1216, Olfr1217, Olfr1218, Olfr1219, Olfr1220, Olfr1221, Olfr1222, Olfr1223, Olfr1224-ps1, Olfr1225, LOC435676, Olfr1226, LOC100042983, GA_x5J8B7TTH1T-1160-261, Olfr1227-ps1, Olfr1228, Olfr1229, Olfr1230, Olfr1231, Olfr1232, Olfr1233, Olfr1234, Olfr1235-ps1, GA_x5J8B7W62NC-668773-668438, Olfr1237-ps1, Olfr1238, Olfr1239, Olfr1240, Olfr1241, Olfr1242, Olfr1243, Olfr1244-ps1, Olfr1245, Olfr1246, Olfr1247, Olfr1248, Olfr1249, Olfr1541-ps1, Olfr1250, Olfr1251, GA_x5J8B7TT7VM-20-924, Olfr1252, GA_x5J8B7W62NC-992588-991951, Olfr1253-ps1, Olfr1254
Downstream geneOlfr1255, Olfr1256, Olfr48, Olfr1257, Olfr1258, Olfr1259, Olfr1260, Olfr1261, Olfr1262, Olfr1263, Olfr1264, Olfr1265, Olfr140, Olfr1266-ps1, Olfr1267-ps1, Olfr1268-ps1, Olfr1269, Olfr32, LOC100043090, Olfr1270, LOC627525, LOC100043096, Olfr1506, Olfr142, Olfr1271, Olfr1272, Olfr1273, LOC100042690, LOC100043113, LOC668629, GA_x5J8B7W2BV0-3116-4045, Ptprj, 4933423P22Rik, Nup160, Fnbp4, Rpl30-ps3, Agbl2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093A23.bB6Ng01-093A23.g
ACCDH904650DH904651
length1,2181,087
definitionDH904650|Mus musculus domesticus DNA, BAC clone: B6Ng01-093A23, 5' end.DH904651|Mus musculus domesticus DNA, BAC clone: B6Ng01-093A23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tgtgggggaggaagggttcccggcgggaattcattgtttagatctgtacc
tcattttttaatacggggtacagatttaatttgattttctggagtccatc
tacttgagttatttatatatattggatattagtcccctatcagatttagg
attggtaaagatcctttcccaatctgttggtggcctttttgtcgtattga
tagtgtcttttgccttatggaagctttgcaattttatgaggtcccatttt
tcaattctcgatcttacagcacaagccattgctgttctattcaggagttt
tccccctgtgcccgtatcttcaaggttttcccccactttctcctctatga
atttcagtatctctggttttatgtggagttacttgatccatgcagccttg
acgttagtacaaggagataagaatggatcaatgatcattcttccaaatga
taactaccagttgtgtcagtaccatttgttgcaaatgctgtattttttcc
actggatgattttagctccctggtcaaagatcaagtgactataggtgtgt
gggatcctttctgggtcttcaattctattccattgatctacctgtctgtc
gctataccaagtaccatgcagttattatcacaattgctctgtagtacacc
atgaggtcaggcatggtgattccaccagaggttctttgatcactgggaag
agtttttgctatcctagttgttttgttattccagatgaatttgcaaattg
ccctttctaactcagtgaagaattaagttggaattttgatggggattgca
ttgaatctgtagattgcttttggtaggataaacatttttactatattaat
cctgccaatccatgagtatgggagatctttccatcttctgagatcttctt
tgatttctttcttcaaagacttgaagttcttatcatacagatctttcact
tccttagagacacacaagttattttatattatttgtgactattgtgaagg
tgtgtttccctaatttctttctcagctgttatctttgtgtagagaagcca
tggttgttgagtatttatatcacacttcctaagctgtttatagattgagt
ctctggtgcaatttaagtcacttataatacatatcacttgcaaaggaatt
aggacctctccttaccatgatcctgaccctttgtgtcaacgttccgaggt
acctcagatcctatttga
gaattccacttgtctcaatatttcaggaaaatataagaacatctaaatga
ctacttaaaatataaaaagcacatcaagtatcactccaacatttaatata
aaaggtaggtggaaagtctcacctgcagggaaaatgtcttcatacccaac
aaatacattaagcttgcatttatatgtaaaacatttaatggaaattagtg
tgccagggtcattattaatactggcacatactaataaaattttaaccatg
cttttctcttttttctatcagtgaagtcctgcaaaaggactttgatttaa
gggggagaccaagagcacctctgtgcctcaaatgtatgccaagtaagcaa
gaagcaaaggctgtgatttcacttcttgagaagttataatgaaggttctc
atgtgtagaagatgtcttcagtcttcaagaatccaaataaaatctttcta
aagcctacctctttctaataaaatgtatccaagtatatggaaggatccag
ctattgatatcttccatgaactctaataagcaaagatgaatgcattaaaa
atatgtactttgagaactaaatgctgactgagagcataccatagatggag
caaattttgtgtttccagagaacttctgggtctagttctttcatttatat
tcatgatatagaatgacttatatgcaccattgctattttaataaataagc
ttgttaaaatatttgggaacaaattcaaatgaagtaatctctcttggaac
agatttcttctcttcaccaatctctagaggtaatatccttgaaacttgcc
caagaatgaatagctactcacaaatggacttgggaaaacctataatttgg
aaagaaaacttccaaagtgtaatttctgggaaactgtgagctgcacatca
taagttattataagtaaaggaagtaatatttagaccacccagagaagaaa
acagtcttggttcaggtgtccatccatacccacaaatcatagagccttcc
aaataacctgtgagtgacaggcctgtcaaggaaaatttaaggtggctgaa
gtccggaaaggctgagacgtggaggatctcactagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_89633113_89634185
seq2: B6Ng01-093A23.g_69_1155

seq1  GAATTCCACTTGTCTCAATATTTCAGGAAAATATAAGAACATCTAAATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACTTGTCTCAATATTTCAGGAAAATATAAGAACATCTAAATGA  50

seq1  CTACTTAAAATATAAAAAGCACATCAAGTATCACTCCAACATTTAATATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTAAAATATAAAAAGCACATCAAGTATCACTCCAACATTTAATATA  100

seq1  AAAGGTAGGTGGAAAGTCTCACCTGCAGGGAAAATGTCTTCATACCCAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTAGGTGGAAAGTCTCACCTGCAGGGAAAATGTCTTCATACCCAAC  150

seq1  AAATACATTAAGCTTGCATTTATATGTAAAACATTTAATGGAAATTAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACATTAAGCTTGCATTTATATGTAAAACATTTAATGGAAATTAGTG  200

seq1  TGCCAGGGTCATTATTAATACTGGCACATACTAATAAAATTTTAACCATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGGGTCATTATTAATACTGGCACATACTAATAAAATTTTAACCATG  250

seq1  CTTTTCTCTTTTTTCTATCAGTGAAGTCCTGCAAAAGGACTTTGATTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTCTTTTTTCTATCAGTGAAGTCCTGCAAAAGGACTTTGATTTAA  300

seq1  GGGGGAGACCAAGAGCACCTCTGTGCCTCAAATGTATGCCAAGTAAGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGAGACCAAGAGCACCTCTGTGCCTCAAATGTATGCCAAGTAAGCAA  350

seq1  GAAGCAAAGGCTGTGATTTCACTTCTTGAGAAGTTATAATGAAGGTTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAAAGGCTGTGATTTCACTTCTTGAGAAGTTATAATGAAGGTTCTC  400

seq1  ATGTGTAGAAGATGTCTTCAGTCTTCAAGAATCCAAATAAAATCTTTCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTAGAAGATGTCTTCAGTCTTCAAGAATCCAAATAAAATCTTTCTA  450

seq1  AAGCCTACCTCTTTCTAATAAAATGTATCCAAGTATATGGAAGGATCCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTACCTCTTTCTAATAAAATGTATCCAAGTATATGGAAGGATCCAG  500

seq1  CTATTGATATCTTCCATGAACTCTAATAAGCAAAGATGAATGCATTAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGATATCTTCCATGAACTCTAATAAGCAAAGATGAATGCATTAAAA  550

seq1  ATATGTACTTTGAGAACTAAATGCTGACTGAGAGCATACCATAGATGGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTACTTTGAGAACTAAATGCTGACTGAGAGCATACCATAGATGGAG  600

seq1  CAAATTTTGTGTTTCCAGAGAACTTCTGGGTCTAGTTCTTTCATTTATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTTTGTGTTTCCAGAGAACTTCTGGGTCTAGTTCTTTCATTTATAT  650

seq1  TCATGATATAGAATGACTTATATGCACCATTGCTATTTTAATAAATAAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGATATAGAATGACTTATATGCACCATTGCTATTTTAATAAATAAGC  700

seq1  TTGTTAAAATATTT-GGAACAAATTCAAATGAAGTAATCTCTCTT-GAAC  748
      |||||||||||||| |||||||||||||||||||||||||||||| ||||
seq2  TTGTTAAAATATTTGGGAACAAATTCAAATGAAGTAATCTCTCTTGGAAC  750

seq1  AGATTTCTTCTCTTCACCAATCTCTAGAGGTAATATCCTTGAAACTTG-C  797
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AGATTTCTTCTCTTCACCAATCTCTAGAGGTAATATCCTTGAAACTTGCC  800

seq1  CAAGAATGAATAGCTACTCACAAATGGACTT-GGAAAACCTATAATTTGA  846
      ||||||||||||||||||||||||||||||| ||||||||||||||||| 
seq2  CAAGAATGAATAGCTACTCACAAATGGACTTGGGAAAACCTATAATTTGG  850

seq1  AAAGAAAACTTCCAAAGTGTAATTTCTGGGAAACTGTGAGCTGCACATCA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAACTTCCAAAGTGTAATTTCTGGGAAACTGTGAGCTGCACATCA  900

seq1  TAAGTTA-TATAAGTAAAGGAAGTAATATTTAGACCACCCAGAGAAGAAA  945
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTATTATAAGTAAAGGAAGTAATATTTAGACCACCCAGAGAAGAAA  950

seq1  ACAGTCTTGGTTCAGGTGTCCATCCATACCCACAAATCAT--AGCCTTCC  993
      ||||||||||||||||||||||||||||||||||||||||  ||||||||
seq2  ACAGTCTTGGTTCAGGTGTCCATCCATACCCACAAATCATAGAGCCTTCC  1000

seq1  -AATAA-CTGTGAGTGACA-GCCTGTCAAAGAAAATTT-AGGT-GCTG-A  1037
       ||||| |||||||||||| ||||||||| |||||||| |||| |||| |
seq2  AAATAACCTGTGAGTGACAGGCCTGTCAAGGAAAATTTAAGGTGGCTGAA  1050

seq1  GTCGTGAAAAGCTGAGACGT-GAGGAGTCT-ACTAGAG  1073
      |||  |||| |||||||||| ||||| ||| |||||||
seq2  GTCCGGAAAGGCTGAGACGTGGAGGA-TCTCACTAGAG  1087