BAC Information

Click to search

BAC

Clone NameB6Ng01-095P12
Chromosome2 (Build37)
Map Location 176,955,498 - 176,956,664
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039060, LOC668030, LOC627914, LOC100039093, LOC668039, LOC100039109, LOC100043381, LOC100043387, LOC100039123, LOC626877, LOC100039156, LOC100039166, 6230416C02Rik, LOC635470
Downstream geneLOC100043403, LOC100039198, LOC100043406, LOC668066, LOC621442, LOC628308, OTTMUSG00000016571, LOC100039233, LOC626802, LOC329575, LOC433515, LOC665205, OTTMUSG00000016327, LOC100039263, LOC626848, 2810021G02Rik, Phactr3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095P12.bB6Ng01-095P12.g
ACCDH906762DH906763
length1,2431,150
definitionDH906762|Mus musculus domesticus DNA, BAC clone: B6Ng01-095P12, 5' end.DH906763|Mus musculus domesticus DNA, BAC clone: B6Ng01-095P12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattctttttaatagctgagtagtactccattgtgtaaatgtacc
ccattttttatatccattcctctgttgagggacatctgggttctttccag
cttctggatattataaataaggctgctatgaacatagtggagcatgtgtc
cttcttaccggttgggacatcttctggatatatgcccaggagaggcattg
cgggatcctccagtagtactatgtccaattttcggaggaaccgccagact
gatttccagagtggttgtacaagtttgcaatcccaccaacaatggaggag
tgttcctctttctccacatcctcgccagcatctgctgtcacctgaatttt
tgatcttagccattctgactggtgtgagatggaatctcagggttgctttg
atttgcattcctctgatgattaaggatgttgaacattttttcaggtgttt
ctcagcctttccgtattcctcgggtgagaattctttgttcagctctgagc
cccatcttttaagggggctatttgattttatggagtccaccctcttgagt
tctttatatatattggatattagtcccctatctgatttaagataggtaaa
gatcctttcctaatctgttggtggtctttttgtcttattgacggtgtctt
ttgccttgcataagctttgcagtttcatgaggtcccattagtcaatcctc
gatcttaaagcacaagccattgctgttctattcaggaattttttccctgt
gcccatatctttgagacttttccccactttctcctctataagtttcagtg
tctctggttttatgtggagttccttgatccacttagatttgaccttagta
caaggagagaggaatgggtcaattcccattcttctacatgataacaacca
gttgtgccagcaccatttgttgaaatgctgtcttttttctactggatggg
tttagctcccttgtcgaagatcagtgaccatgggtgtgtgggtcatttct
gggtcttcaatctatccattggtctactgtctgtcactataccagtacat
gcaggttttatacaaattgctctgtagtaagccttaggtcaggcattggt
gattccctagaagtacttttataccttaagaaagagctttgctattctaa
ggcttgtaatctcgagtgatttggcgaatgctcctctccattcgtctgtg
aaatatgacattcgcgaatatatatagttatgacgcggagcat
gaattcactctgtatacaggcaggcctcgaactcagaaatccacctacct
ctgcctccctagtgctgggattaaaggtgtgtaccaccactgcccggctc
attcttatttttaaagagattttatatatgtctgtttagagaaacatctc
ctgtagctcttactttctttatgtcatgtagttaagacttgctttgaact
cctaatcctccctctgctgcccagggcttggaaaacagtcctacaactgc
tttcaggctgggttctgactgatcagtgagacaaaagacaccagggaatg
agtgttgtctaacctccctggtttacagggttacaagttaggggattaca
aataaagagggacaggtataaggttgagttcactgaccaactttgaagct
ggtctacttgcagcacagaaaaggaggaggaataaggtaggtgaggcctt
tctgctttggcagtagttgacattcaccatgaggagtcaagtaatcaatt
ttacacaatcagtaaaattccatactggacattttgtggcatttcccaga
ttagggcaatgacaaatgagatcatggtccctctctgttacagcatattg
ctggcatacctcaccatcaaccccaggagtagggctgccaatctcccagc
tgccattccttatggaatccaatcatttgggaactggcctttttatctat
cattaatcatcctgatctcctggtctaactcttgcttctcccctccttcc
tctctccacaaagttcaaggttatgtctactctataccatcccaaatata
actaggtctggctatgttctcacttttgtgtataatatactttctcctcc
accatacctaggagcaatgctatcctttacttttaatttcatcttgtctt
ctctttctctcccattaactgcttctagcttaaaattcatagccacttta
cttttaaattattgtaatgtatgatttattttcagttcagctgcagactt
tcatattaagaaaatagaagatggctgcacaggacattgcatgcataatg
aataaacaagaaagacatggcctttaaatataaatactgtctgccagaca
tagaacatcgttaaatgtacatttggaaataagcaatgttctgcatgtag

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_176955498_176956664
seq2: B6Ng01-095P12.g_71_1220 (reverse)

seq1  CTACATGCAG-ACATAGCCCTAATCTCAAAAATGTACATTTAAAAGGATG  49
      |||||||||| |||| |  || || ||  ||||||||||||  || ||||
seq2  CTACATGCAGAACATTG--CTTATTTC-CAAATGTACATTT--AACGATG  45

seq1  TTCTA-GTCCTGCAGACCAAGTATTTTATATTTAAAAGGCCCATGGTCCT  98
      ||||| |||  ||||||  |||| ||||||||||||  | |||||   ||
seq2  TTCTATGTCTGGCAGAC--AGTA-TTTATATTTAAA--GGCCATG--TCT  88

seq1  TTCTTTGTATATTCAATTATGCATGCAATGTCCTGTGCAGCCATC-TCTA  147
      ||| |||| ||||| |||||||||||||||||||||||||||||| ||||
seq2  TTC-TTGTTTATTC-ATTATGCATGCAATGTCCTGTGCAGCCATCTTCTA  136

seq1  -TTTCTTAATATGAAAGTCTTGCAGCTGAACTGAAATAAAATTCATACAT  196
       |||||||||||||||||| |||||||||||||||| | || ||||||||
seq2  TTTTCTTAATATGAAAGTC-TGCAGCTGAACTGAAA-ATAAATCATACAT  184

seq1  TAACAATAATTTAAAAGTAAAAGTGGCTATGAATTTTAAAGCTAGAAGCA  246
      | |||||||||||||||| |||||||||||||||||| ||||||||||||
seq2  T-ACAATAATTTAAAAGT-AAAGTGGCTATGAATTTT-AAGCTAGAAGCA  231

seq1  GTTAATGGGAGAGAAAAGAGAAGACAAAGATGAAATTAAAAGTAAAGGAT  296
      ||||||||||||| ||||||||||| ||||||||||||||||||||||||
seq2  GTTAATGGGAGAG-AAAGAGAAGAC-AAGATGAAATTAAAAGTAAAGGAT  279

seq1  AGCATTGCTCCTAGGTATGGTGGAGGAGAAAGTATATTATACACAAAAGT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTGCTCCTAGGTATGGTGGAGGAGAAAGTATATTATACACAAAAGT  329

seq1  GAGAACATAGCCAGACCTAGTTATATTTGGGATGGTATAGAGTAGACATA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACATAGCCAGACCTAGTTATATTTGGGATGGTATAGAGTAGACATA  379

seq1  ACCTTGAACTTTGTGGAGAGAGGAAGGAGGGGAGAAGCAAGAGTTAGACC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGAACTTTGTGGAGAGAGGAAGGAGGGGAGAAGCAAGAGTTAGACC  429

seq1  AGGAGATCAGGATGATTAATGATAGATAAAAAGGCCAGTTCCCAAATGAT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGATCAGGATGATTAATGATAGATAAAAAGGCCAGTTCCCAAATGAT  479

seq1  TGGATTCCATAAGGAATGGCAGCTGGGAGATTGGCAGCCCTACTCCTGGG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTCCATAAGGAATGGCAGCTGGGAGATTGGCAGCCCTACTCCTGGG  529

seq1  GTTGATGGTGAGGTATGCCAGCAATATGCTGTAACAGAGAGGGACCATGA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGATGGTGAGGTATGCCAGCAATATGCTGTAACAGAGAGGGACCATGA  579

seq1  TCTCATTTGTCATTGCCCTAATCTGGGAAATGCCACAAAATGTCCAGTAT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATTTGTCATTGCCCTAATCTGGGAAATGCCACAAAATGTCCAGTAT  629

seq1  GGAATTTTACTGATTGTGTAAAATTGATTACTTGACTCCTCATGGTGAAT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTTTACTGATTGTGTAAAATTGATTACTTGACTCCTCATGGTGAAT  679

seq1  GTCAACTACTGCCAAAGCAGAAAGGCCTCACCTACCTTATTCCTCCTCCT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAACTACTGCCAAAGCAGAAAGGCCTCACCTACCTTATTCCTCCTCCT  729

seq1  TTTCTGTGCTGCAAGTAGACCAGCTTCAAAGTTGGTCAGTGAACTCAACC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTGCTGCAAGTAGACCAGCTTCAAAGTTGGTCAGTGAACTCAACC  779

seq1  TTATACCTGTCCCTCTTTATTTGTAATCCCCTAACTTGTAACCCTGTAAA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACCTGTCCCTCTTTATTTGTAATCCCCTAACTTGTAACCCTGTAAA  829

seq1  CCAGGGAGGTTAGACAACACTCATTCCCTGGTGTCTTTTGTCTCACTGAT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGAGGTTAGACAACACTCATTCCCTGGTGTCTTTTGTCTCACTGAT  879

seq1  CAGTCAGAACCCAGCCTGAAAGCAGTTGTAGGACTGTTTTCCAAGCCCTG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCAGAACCCAGCCTGAAAGCAGTTGTAGGACTGTTTTCCAAGCCCTG  929

seq1  GGCAGCAGAGGGAGGATTAGGAGTTCAAAGCAAGTCTTAACTACATGACA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGCAGAGGGAGGATTAGGAGTTCAAAGCAAGTCTTAACTACATGACA  979

seq1  TAAAGAAAGTAAGAGCTACAGGAGATGTTTCTCTAAACAGACATATATAA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAAAGTAAGAGCTACAGGAGATGTTTCTCTAAACAGACATATATAA  1029

seq1  AATCTCTTTAAAAATAAGAATGAGCCGGGCAGTGGTGGTACACACCTTTA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCTTTAAAAATAAGAATGAGCCGGGCAGTGGTGGTACACACCTTTA  1079

seq1  ATCCCAGCACTAGGGAGGCAGAGGTAGGTGGATTTCTGAGTTCGAGGCCT  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCAGCACTAGGGAGGCAGAGGTAGGTGGATTTCTGAGTTCGAGGCCT  1129

seq1  GCCTGTATACAGAGTGAATTC  1167
      |||||||||||||||||||||
seq2  GCCTGTATACAGAGTGAATTC  1150