BAC Information

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BAC

Clone NameB6Ng01-096H14
Chromosome2 (Build37)
Map Location 47,572,334 - 47,573,464
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC383691, LOC100041457
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-096H14.bB6Ng01-096H14.g
ACCDH907113DH907114
length1,2691,130
definitionDH907113|Mus musculus domesticus DNA, BAC clone: B6Ng01-096H14, 5' end.DH907114|Mus musculus domesticus DNA, BAC clone: B6Ng01-096H14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaagacacaatgagaagaccaaagctaaggataataggtataga
ctagaagtaagattcacaacttaaagggaatatctaaacgggtaaatatc
ttcaacaaaattatagaagaacacttccccaacctaaacaaagagatgcc
catgaacatacaagaagcctaaagaactccaaatagtttggaccagaaag
gaaattcatcccatcacataataatcaaaacaccaaatgcacaaaccaaa
gaaagaacattaaaagcagtaaggggaaaaggtcaagtaacatataaacg
caggctaaacagaattacacctgacttctctccagagactatgaaagtca
gaagatcctgggtagatgtcatacagatcctaagagaacacaaatgtcag
cccaggctactatacccaataaaactctcaattaccatagatgaagaaac
caaggtataccatgacaaaaccaaatttatataatatctttccaaaaaat
ctagcccttcaaatgataataaagggaaatctccaacacaagatgggaaa
ctatgccctagaaaaagcaagaaagtaatctttcaacaaacctacaagaa
gatagccccatgaacagtatcctaactctaatatcaaaaataacaggaag
caacaaccacttttccttaatatctcttaatattaatggacttaatttcc
caataaaaacagactaaccgactgggtaggtaaacaggacccaaaatttt
gctgcatacaggaaacccacctcagtgacaaagacagacactacctcaga
gtaaaaggctgaaaaacaattttccaaacgtacctagaagatgctccaac
atgtaataaggacacatactccactatgttcatagtagtcttatttataa
taaccagaagctggaaagaacccagatttccctcaaaaaaggaatggata
cagaaagtgtggtacatttacacaatggagtactactcagctattaaaaa
caatgaatttatgaaattcttagacaatggatggatctggaagatatcat
cctgagtggaggtaactcatcacaaaagaacccacatgatatgcactcac
tgataagtggatatttattcttagaaagcccagagctcagaaatatccag
gattacattccttcagccatgcattcaaggagatggaagacatatgtgga
cgtcattcaactgaagcggacaactgcctcggaaaagttaacgagagaaa
agtgttaagactcgtggga
gaattcatctgatgaacctttgaaatatcactaacagcttaatgaaagga
acacaaattatagttaaggatgattccttgatcatgaattcagactatat
gagaaacaatttgaaagtaaatgttttaatcgccacaatacaatctggct
gttacttttctggttatgactgcatagtttaggtgacattggtgccagag
gaatcgttctccataatttatgtaattctgaacagttttgtgggagtaag
gtattggaaaagttaatcctgtacatgaaacttgaaatctaatgcctctc
agtgttgctggtagaattctcagtagattcatgtttaagtaactaaaagc
attgtttctctgtgtctactataagagatggagaagtgtggaatcagttc
tactttgactgaaaaagaaagagtaaatggtcatttaattctacaaattt
gaagtttctaaggattacatatcgacaagcttaagtatgtgatttatatc
atttacctatagcatcacaaacgttttaagggaggcataatggagaagtg
ttgctctgagtcaggattacttctttgtaagacttggtgacctcaagccg
gttcatacatcaactacatacaactaaattcataaaccatgattgtgagt
ttggtttatctttttgtgttgtcattgaaggctggtaaaatcatatggaa
aaaccgtactcatctgtatcattggactgaaatgtaagtaaacaatggtg
agctctgtttgctgtgaaagcaactgaataagacaagtgactggagttca
atgggatatttttaaaagatttattcatattatgtttgttgtgtgtttat
gtgtatcacacggcagagcaagaagggggtgcaggatccctgaaactgga
tttacaggaggtataggtgctagaaataggtactttgtagagatcctcta
cctctatctctgccaatgggatagggatgatctgcataagctgtaactaa
cctcattcacataatacgctggataaagtgccaatgaccttggaaaagtg
ttggtttcataatttcttaatcaattaatgtggttcaatagaaaacctcg
aaacttgaatttttaaaaaaaatgaatgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_47572334_47573464
seq2: B6Ng01-096H14.g_70_1199 (reverse)

seq1  TGCATTCA--TTATTTAAAAAATCAAGTTTC-AGAGTTTCTATTGTACCA  47
      ||||||||  || |||||||| ||||||||| ||  ||||||||| ||| 
seq2  TGCATTCATTTTTTTTAAAAATTCAAGTTTCGAGGTTTTCTATTGAACC-  49

seq1  ACATTAATGGATTAAGAAAATATGAAAAACAACACTTTT-CAAGGTCATT  96
      |||||||| |||||||||| |||| ||| |||||||||| ||||||||||
seq2  ACATTAATTGATTAAGAAATTATG-AAACCAACACTTTTCCAAGGTCATT  98

seq1  GGCAACTTTTATCAGCGTATTATGTGAAATGA-GTTAGTTACAGC-TATG  144
      ||| |||||   |||||||||||||| ||||| |||||||||||| ||||
seq2  GGC-ACTTTATCCAGCGTATTATGTG-AATGAGGTTAGTTACAGCTTATG  146

seq1  CAAGATCATCCCTATTCCATTGGCAGAGATAGAGGTAGAGGATCTCTTAC  194
      | ||||||||||||| |||||||||||||||||||||||||||||| |||
seq2  C-AGATCATCCCTATCCCATTGGCAGAGATAGAGGTAGAGGATCTC-TAC  194

seq1  AAAGTACCTATTTCTAGCACCTATACCTCCTGTAAATCCAGTTTCAGGGG  244
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAAGTACCTATTTCTAGCACCTATACCTCCTGTAAATCCAGTTTCA-GGG  243

seq1  ATCCTGCACCCCCTTCTTGCTTCTGCCGTGTGATACACATAAACACACAA  294
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  ATCCTGCACCCCCTTCTTGC-TCTGCCGTGTGATACACATAAACACACAA  292

seq1  C-AACATAATATGAATAAATCTTTTAAAAATATCCCATTGAACTCCAGTC  343
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACATAATATGAATAAATCTTTTAAAAATATCCCATTGAACTCCAGTC  342

seq1  ACTTGTCTTATTCAGTTGCTTTCACAGCAAACAGAGCTCACCATTGTTTA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTCTTATTCAGTTGCTTTCACAGCAAACAGAGCTCACCATTGTTTA  392

seq1  CTTACATTTCAGTCCAATGATACAGATGAGTACGGTTTTTCCATATGATT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACATTTCAGTCCAATGATACAGATGAGTACGGTTTTTCCATATGATT  442

seq1  TTACCAGCCTTCAATGACAACACAAAAAGATAAACCAAACTCACAATCAT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCAGCCTTCAATGACAACACAAAAAGATAAACCAAACTCACAATCAT  492

seq1  GGTTTATGAATTTAGTTGTATGTAGTTGATGTATGAACCGGCTTGAGGTC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTATGAATTTAGTTGTATGTAGTTGATGTATGAACCGGCTTGAGGTC  542

seq1  ACCAAGTCTTACAAAGAAGTAATCCTGACTCAGAGCAACACTTCTCCATT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGTCTTACAAAGAAGTAATCCTGACTCAGAGCAACACTTCTCCATT  592

seq1  ATGCCTCCCTTAAAACGTTTGTGATGCTATAGGTAAATGATATAAATCAC  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTCCCTTAAAACGTTTGTGATGCTATAGGTAAATGATATAAATCAC  642

seq1  ATACTTAAGCTTGTCGATATGTAATCCTTAGAAACTTCAAATTTGTAGAA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTAAGCTTGTCGATATGTAATCCTTAGAAACTTCAAATTTGTAGAA  692

seq1  TTAAATGACCATTTACTCTTTCTTTTTCAGTCAAAGTAGAACTGATTCCA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATGACCATTTACTCTTTCTTTTTCAGTCAAAGTAGAACTGATTCCA  742

seq1  CACTTCTCCATCTCTTATAGTAGACACAGAGAAACAATGCTTTTAGTTAC  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCTCCATCTCTTATAGTAGACACAGAGAAACAATGCTTTTAGTTAC  792

seq1  TTAAACATGAATCTACTGAGAATTCTACCAGCAACACTGAGAGGCATTAG  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACATGAATCTACTGAGAATTCTACCAGCAACACTGAGAGGCATTAG  842

seq1  ATTTCAAGTTTCATGTACAGGATTAACTTTTCCAATACCTTACTCCCACA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAAGTTTCATGTACAGGATTAACTTTTCCAATACCTTACTCCCACA  892

seq1  AAACTGTTCAGAATTACATAAATTATGGAGAACGATTCCTCTGGCACCAA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGTTCAGAATTACATAAATTATGGAGAACGATTCCTCTGGCACCAA  942

seq1  TGTCACCTAAACTATGCAGTCATAACCAGAAAAGTAACAGCCAGATTGTA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACCTAAACTATGCAGTCATAACCAGAAAAGTAACAGCCAGATTGTA  992

seq1  TTGTGGCGATTAAAACATTTACTTTCAAATTGTTTCTCATATAGTCTGAA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGCGATTAAAACATTTACTTTCAAATTGTTTCTCATATAGTCTGAA  1042

seq1  TTCATGATCAAGGAATCATCCTTAACTATAATTTGTGTTCCTTTCATTAA  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGATCAAGGAATCATCCTTAACTATAATTTGTGTTCCTTTCATTAA  1092

seq1  GCTGTTAGTGATATTTCAAAGGTTCATCAGATGAATTC  1131
      ||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTAGTGATATTTCAAAGGTTCATCAGATGAATTC  1130