BAC Information

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BAC

Clone NameB6Ng01-096L13
Chromosome2 (Build37)
Map Location 144,885,603 - 144,886,768
singlet/doubletsinglet
Overlap genenone
Upstream gene4930517K23Rik, LOC627160, EG433481, Snx5, 8430406I07Rik, Ovol2, Ppia-ps2_1789.1, LOC635097, Csrp2bp, LOC100043552, 6330439K17Rik, Polr3f, Rbbp9, Sec23b, Gm561, Dtd1, 1700010M22Rik
Downstream geneSlc24a3, LOC627312, OTTMUSG00000015643, LOC433482, LOC100043810, Rin2, Nat5, Crnkl1, 4930529M08Rik, LOC100043563
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-096L13.bB6Ng01-096L13.g
ACCDH907290DH907291
length1,2561,156
definitionDH907290|Mus musculus domesticus DNA, BAC clone: B6Ng01-096L13, 5' end.DH907291|Mus musculus domesticus DNA, BAC clone: B6Ng01-096L13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctcagagccccatttttaatggggttatttgattt
tctggagtccaccttcttgagttctttatatatattggatattagtcccc
tatctgatttaagataggtaaagatccattcccaatctgttggtggcctt
tttgtcttattgacagtgtcttttgccttacagacactttgcaaatttgt
cccatttgtccattctcaatcttacggcacaagccattgctgttctattc
aggaatttttcccctgtgcccatatctttgaggcttttccccactttccc
ctctataagtttcactgtctctggttttatgtggagttccttgatccact
tagatttgaccttagtacaaggagataggaatggatcaattcgcattctt
ctacatgttaaccgtcagttgtgccagcaccatttgttgaaaatgctgtc
ttttttccactggatggttttagctcctttgtcaaagatcaagtgaccat
aggtgtgtgggttcatttctgggtcttcaattctattccattggtctact
tgtttgttgctataccagtaccatgcagtttttatcacaattgctctgta
gtacagctttaggtcaggcatggtgattccaccagaggttcttttatcct
tgagaagagtttttgctatcctaggttttttgttattccagatgaatttg
cagattgacctttctaatttgttctcacatgatatgtactcactgataag
tggatattagcccagaaacttagaatacccaagatataagatacaatttg
caaaacacatgaaactcaagaagaacaaagaccaaagtgtggacactttg
cccctttttagaatttgggaacaaaacacccatggaaaggagttacagag
acaaaatttggagctaagacgaaattatggatcatctagagactgtcata
cccagggatccatcccatatcagtctcaaacactgacaccattgcataca
ctagcaagatttgcttgaagggtcctgatatagctgtctcttgtgaggct
atgcctgtgctagcaaacacagaagtgatgctcacagtcagcttatttga
tgataccatggtcccccattgagaagcttaagaaagtagccaggagctaa
atgaatcttgccatcctatatgttgaacacaatttgactaacgtatccgg
aacctgtcctagtgctatgtaatcagagaatgtctcaatgtctggcccta
ctacag
gaattcattctggatcctggggccttctccaaggaagctgggtcttggct
tcaaagactagggcaacctggcttagggtacgaggatataagggccatct
gggcatagactctaggaaaataccatagcagcctacgttctgaactggtt
gcctgaacctggtgaatttgagggatatgcatttcattactggacacacg
agcaccttcaaacagtgtatgtgatctggggctgacagagcagggctgta
attctagttacttgggaatctgaggtaaaaaaataaataaataaaagttc
aatgcttttctgaattatagagtgagtttaaggccagccaaggaatattt
aatgaacccccacctcgaataaaaaaaatgaaaaatgtgagttgatggta
taatttagtggggaaatacttgcttaatccatgtgacgtcctgggtccaa
tccataaaaccacaaaagtgtgtgtgtgtgttttctaaaggcctaacgaa
gccaaagaccccaggaaaaaacctagagtcagacaagacaaggcctgctt
aatttctgtagcatcaacaagaccacaaaaggggttccaggtgtttcaga
aacaggacccaggcatggcctcttatagaatgtgtgccttttaaacgtag
aatatgacacgactactttagaatcaccatggaaacacgcctttgaatgg
aggaataagataatttcagaaaggtttaacccaggagagaaaacccaccc
tgaatatcggtggcaccatcccctgggctgggctacccagctgaataaga
aggagaaaacgagatccacaagactgctcagcaggtcagagtgtttgcta
cacagaccaggtgagctggcatatgcatgaattctttgacacacactcaa
aataataatttttcttaaaaagaaaaaaaaatggggagaaaatgagctga
gcaatgacattcttctctctgctcctgatgctctgctgacacgtctttct
ctctatcatagacaaaccctttctacttccaaggtgctttttgtgtaatt
gcatagcaatgaaggagtggctcatataagggttggggatggtgaggcta
gctctggttgaggttatcaggaacgggaacaattctggatgggagatgtc
tggcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_144885603_144886768
seq2: B6Ng01-096L13.g_66_1221

seq1  GAATTCATTCTGGATCCTGGGGCCTTCTCCAAGGAAGCTGGGTCTTGGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCTGGATCCTGGGGCCTTCTCCAAGGAAGCTGGGTCTTGGCT  50

seq1  TCAAAGACTAGGGCAACCTGGCTTAGGGTACGAGGATATAAGGGCCATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGACTAGGGCAACCTGGCTTAGGGTACGAGGATATAAGGGCCATCT  100

seq1  GGGCATAGACTCTAGGAAAATACCATAGCAGCCTACGTTCTGAACTGGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATAGACTCTAGGAAAATACCATAGCAGCCTACGTTCTGAACTGGTT  150

seq1  GCCTGAACCTGGTGAATTTGAGGGATATGCATTTCATTACTGGACACACG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGAACCTGGTGAATTTGAGGGATATGCATTTCATTACTGGACACACG  200

seq1  AGCACCTTCAAACAGTGTATGTGATCTGGGGCTGACAGAGCAGGGCTGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCTTCAAACAGTGTATGTGATCTGGGGCTGACAGAGCAGGGCTGTA  250

seq1  ATTCTAGTTACTTGGGAATCTGAGGTAAAAAAATAAATAAATAAAAGTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAGTTACTTGGGAATCTGAGGTAAAAAAATAAATAAATAAAAGTTC  300

seq1  AATGCTTTTCTGAATTATAGAGTGAGTTTAAGGCCAGCCAAGGAATATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTTTTCTGAATTATAGAGTGAGTTTAAGGCCAGCCAAGGAATATTT  350

seq1  AATGAACCCCCACCTCGAATAAAAAAAATGAAAAATGTGAGTTGATGGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAACCCCCACCTCGAATAAAAAAAATGAAAAATGTGAGTTGATGGTA  400

seq1  TAATTTAGTGGGGAAATACTTGCTTAATCCATGTGACGTCCTGGGTCCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTAGTGGGGAAATACTTGCTTAATCCATGTGACGTCCTGGGTCCAA  450

seq1  TCCATAAAACCACAAAAGTGTGTGTGTGTGTTTTCTAAAGGCCTAACGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATAAAACCACAAAAGTGTGTGTGTGTGTTTTCTAAAGGCCTAACGAA  500

seq1  GCCAAAGACCCCAGGAAAAAACCTAGAGTCAGACAAGACAAGGCCTGCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAAGACCCCAGGAAAAAACCTAGAGTCAGACAAGACAAGGCCTGCTT  550

seq1  AATTTCTGTAGCATCAACAAGACCACAAAAGGGGTTCCAGGTGTTTCAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCTGTAGCATCAACAAGACCACAAAAGGGGTTCCAGGTGTTTCAGA  600

seq1  AACAGGACCCAGGCATGGCCTCTTATAGAATGTGTGCCTTTTAAACGTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGACCCAGGCATGGCCTCTTATAGAATGTGTGCCTTTTAAACGTAG  650

seq1  AATATGACACGACTACTTTAGAATCACCATGGAAACACGCCTTTGAATGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGACACGACTACTTTAGAATCACCATGGAAACACGCCTTTGAATGG  700

seq1  AGGAATAAGATAATTTCAGAAAGGTTTAACCCAGGAGAGAAAACCCACCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATAAGATAATTTCAGAAAGGTTTAACCCAGGAGAGAAAACCCACCC  750

seq1  TGAATATCGGTGGCACCATCCCCTGGGCTGGGCTACCCAGCTGAATAAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATATCGGTGGCACCATCCCCTGGGCTGGGCTACCCAGCTGAATAAGA  800

seq1  AGGAGAAAACGAGATCCACAAGACTGCTCAGCAGGTCAGAGTGTTTGCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAAAACGAGATCCACAAGACTGCTCAGCAGGTCAGAGTGTTTGCTA  850

seq1  CACAGACCAGGTGAGCTGGCATATGCATGAATTCTTTGACACACACTCAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGACCAGGTGAGCTGGCATATGCATGAATTCTTTGACACACACTCAA  900

seq1  AATAATAATTTTTCTTAAAAAGAAAAAAAA--TGGGAGAAAATGAGCTGA  948
      ||||||||||||||||||||||||||||||   |||||||||||||||||
seq2  AATAATAATTTTTCTTAAAAAGAAAAAAAAATGGGGAGAAAATGAGCTGA  950

seq1  GCAATGACATTC-TCTCTCTGCTCCCTGATGCTCCTGCTGACACGTCTTC  997
      |||||||||||| |||||||||| ||||||||| ||||||||||||||| 
seq2  GCAATGACATTCTTCTCTCTGCT-CCTGATGCT-CTGCTGACACGTCTT-  997

seq1  TCTC-CTATCATAGACAAACCCTTCCTTCCTCCCAAGTTGCTTTTGTTGG  1046
      |||| ||||||||||||||||||| | | || ||||| ||||||  ||| 
seq2  TCTCTCTATCATAGACAAACCCTTTC-TACTTCCAAGGTGCTTT--TTGT  1044

seq1  TTATTTGCATAGCAATGAGGGAAGTGGCTCATATAAAGGGTTTGGGGATG  1096
       || |||||||||||||| || ||||||||||||||  || |||||||||
seq2  GTAATTGCATAGCAATGAAGG-AGTGGCTCATATAA--GGGTTGGGGATG  1091

seq1  TTGAGGCTAGCTCTGGGTTGAGTGTTATCAGGAAGTGGGAACAATTCTGA  1146
       ||||||||||||| ||||||| |||||||||||  ||||||||||||| 
seq2  GTGAGGCTAGCTCT-GGTTGAG-GTTATCAGGAA-CGGGAACAATTCTG-  1137

seq1  TATGGAAGATGTCTAGGCAG  1166
       |||| |||||||| |||||
seq2  GATGGGAGATGTCT-GGCAG  1156