BAC Information

Click to search

BAC

Clone NameB6Ng01-097F08
Chromosome2 (Build37)
Map Location 42,061,640 - 42,192,964
singlet/doubletdoublet
Overlap geneLrp1b
Upstream geneLOC100042629, LOC625094
Downstream geneLOC100041228
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-097F08.bB6Ng01-097F08.g
ACCDH907737DH907738
length165258
definitionDH907737|Mus musculus domesticus DNA, BAC clone: B6Ng01-097F08, 5' end.DH907738|Mus musculus domesticus DNA, BAC clone: B6Ng01-097F08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(42,061,640 - 42,061,804)(42,192,707 - 42,192,964)
sequence
acattgaactattgaagtgaccaaatagaaatagaattcctccttaatca
agttataaataaaataaaatatacttaacaatcaaaatacaaagacacac
agacatgcatacaaacagagataaaaagaatgatagagatggagggtaga
aggggaagaggaggt
tttcctagttcttgaatttcttgttgataatagtgtctcagtgtactgtg
gcgcagggtggaacactagcatcctaggttcatgtatcaagcctctctct
gcctaccattacatggtaaacctttctatcttagcttagcttcaggctgg
ctcagctaccagtgatatcagatgctcagtctactgatgctcaggagaga
tgttcctcaaaacctttttcaagaagaagaggaaggatgagggggaggag
gaggagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_42061640_42061804
seq2: B6Ng01-097F08.b_55_219

seq1  ACATTGAACTATTGAAGTGACCAAATAGAAATAGAATTCCTCCTTAATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGAACTATTGAAGTGACCAAATAGAAATAGAATTCCTCCTTAATCA  50

seq1  AGTTATAAATAAAATAAAATATACTTAACAATCAAAATACAAAGACACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATAAATAAAATAAAATATACTTAACAATCAAAATACAAAGACACAC  100

seq1  AGACATGCATACAAACAGAGATAAAAAGAATGATAGAGATGGAGGGTAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATGCATACAAACAGAGATAAAAAGAATGATAGAGATGGAGGGTAGA  150

seq1  AGGGGAAGAGGAGGT  165
      |||||||||||||||
seq2  AGGGGAAGAGGAGGT  165

seq1: chr2_42192707_42192964
seq2: B6Ng01-097F08.g_74_331 (reverse)

seq1  TCCTCCTCCTCCTCCCCCTCATCCTTCCTCTTCTTCTTGAAAAAGGTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCTCCTCCTCCCCCTCATCCTTCCTCTTCTTCTTGAAAAAGGTTTT  50

seq1  GAGGAACATCTCTCCTGAGCATCAGTAGACTGAGCATCTGATATCACTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAACATCTCTCCTGAGCATCAGTAGACTGAGCATCTGATATCACTGG  100

seq1  TAGCTGAGCCAGCCTGAAGCTAAGCTAAGATAGAAAGGTTTACCATGTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGAGCCAGCCTGAAGCTAAGCTAAGATAGAAAGGTTTACCATGTAA  150

seq1  TGGTAGGCAGAGAGAGGCTTGATACATGAACCTAGGATGCTAGTGTTCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGGCAGAGAGAGGCTTGATACATGAACCTAGGATGCTAGTGTTCCA  200

seq1  CCCTGCGCCACAGTACACTGAGACACTATTATCAACAAGAAATTCAAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCGCCACAGTACACTGAGACACTATTATCAACAAGAAATTCAAGAA  250

seq1  CTAGGAAA  258
      ||||||||
seq2  CTAGGAAA  258