BAC Information

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BAC

Clone NameB6Ng01-097K18
Chromosome2 (Build37)
Map Location 85,852,663 - 85,853,263
singlet/doubletsinglet
Overlap genenone
Upstream geneP2rx3, Ssrp1, Tnks1bp1, Agtrl1, LOC625033, Lrrc55, Olfr987, GA_x5J8B7W531T-1241080-1240524, Olfr988, GA_x5J8B7W531T-1286425-1285652, Olfr990-ps1, Olfr991-ps1, Olfr992, Olfr993, Olfr994, Olfr995, 4833423E24Rik, Olfr996, Olfr997-ps1, Olfr998, Olfr999-ps1, Olfr1000, Olfr1001-ps1, Olfr1002, GA_x5J8B7W531T-1558688-1559570, Olfr1004-ps1, Olfr154, GA_x5J8B7W531T-1577060-1577325, Olfr1006, GA_x5J8B7W531T-1588603-1588734, Olfr1008, Olfr1009, Olfr1010, Olfr1012, Olfr1013, Olfr1014, Olfr1015, Olfr1016, GA_x5J8B7W3KVV-518538-519236, Olfr1018, Olfr1019, Olfr1020, Olfr1021-ps1, Olfr1022, Olfr1023, Olfr1024, Olfr1025-ps1, Olfr1026, Olfr1027-ps1, Olfr1028, Olfr1029, Olfr1030, Olfr1031, Olfr1032
Downstream geneLOC100042075, Olfr1033, Olfr1034, Olfr1533-ps1, Olfr1035-ps1, Olfr1036, Olfr1037, LOC100041372, Olfr1038, Olfr1039, Olfr1040, GA_x5J8B7W3KVV-170014-170572, Olfr1042, Olfr1043, Olfr1044, Olfr52, Olfr1045, Olfr1046, Olfr1047, Olfr1048, Olfr1049, Olfr1050-ps1, Olfr1051, GA_x5J8B7W3KVV-25848-25992, Olfr1052, Olfr1053-ps1, Olfr1054, Olfr1055, Olfr1056, Olfr1057, GA_x5J8B7TRQ4E-1174-939, Olfr1058, Olfr1059-ps1, Olfr1515, Olfr1062, Olfr1063-ps1, Olfr1064-ps1, Olfr1065, Olfr1066, Olfr1069-ps1, Olfr1070-ps1, Olfr228, Olfr1073-ps1, Olfr1075-ps1, GA_x5J8B7W4CQV-104617-103730, Olfr1076, LOC625853, Olfr1078-ps1, GA_x5J8B7W4CQV-78329-78805, Olfr1079, Olfr1080, Olfr1081-ps1, Olfr1082, GA_x5J8B7W4CQV-18360-18784, Olfr1083, Olfr1084, Olfr1085, Olfr1086, Olfr1087, Olfr1088-ps1, Olfr1089, Olfr1090, Olfr1091-ps1, GA_x5J8B7W3Y5M-123838-124302, Olfr1093, Olfr141, Olfr1094, Olfr1095, Olfr1096-ps1, Olfr1097, Olfr1098, Olfr1099, Olfr1100, Olfr1101, Olfr1102, Olfr1103-ps1
LinkOpen Mouse BAC browser

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BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-097K18.bB6Ng01-097K18.g
ACCDH907977DH907978
length1,224601
definitionDH907977|Mus musculus domesticus DNA, BAC clone: B6Ng01-097K18, 5' end.DH907978|Mus musculus domesticus DNA, BAC clone: B6Ng01-097K18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctcagattgtgtttcctttattactttcatttccatcttcttga
tttccatcatcttgaataatttacttatttccttcacctatttaattgta
ttttcctgtatttctttaaaggatttattggttttcttgttaaaccattc
tacctgtttaactttgctttcttgtatttctttgagggatttattcattt
ggtctttaaagtatctatcgcctttacaaggttgaatttaagttcatttt
gctgtgcttcagttgtgtcatctccagggcttgttgttacctttgctatg
aatgtgtccgattgctctgattctttttgtttctctgtttatgctggcct
tcagccatcttgtagttctttaattttcctgctctactacgtatcaggaa
agcaggcttaatcgggacgtgtcccatgcagcaggtctgtgggcagtctt
ggacatttgttcttgcaggtctggatgctccttgctaggcattcctgatg
gaggccagtagagtggtggcaagacaactgagattttgggtttgtgggca
taaggggagcccacagctagttcaggagagctgagcatgtcccaggggac
agagagggaaactggggtgacaggatctagtctgattgttgatagaggtc
agaagagcagtggctaggcaatggatctgttatgacatttcctaacaaag
tgtgcttttgtgattctctttggtgctctttcctctatccctgctacaat
aattaacccactgtagccccatataactgagagcttttcttcttcttttt
ttttcatattccacatattctttttgcttagtctccctcattcttcacca
ctattttatataaattaaggccatgagatgaaatgtatatgaatactcat
tggaataaaatgttaagtttccatataataagaaaaaaaaactttggtgg
gtcattaataattcaatatttacttcctatcacactataagcaaaacaaa
aaggatcttaaacaaaagcaatttcttttcatttgtcattcattttatgt
cataaaagaatttccattctcattggtgaaatccactaatgttgtttgtg
tcctctgtagccaaaccttggatgacagctagattgtttcaatttgtgta
gccaaacctggtcttaactacaggagcatgtaaatgcattttgcaatttt
gtgctataaaggccaaaacacttt
gaattcttctatatcattaggggacatgggcctgtttagatagtttacct
gctcttgatttaaatttgatacctgttatctctctagaaaatcatccatt
tcatttttgattttcatttccagttttaatgagtaaaggcttttatgttg
gggtccagcctcaataaagtatgtgagttctcaactggaagcagggatat
ctggaaggcacataataaataaatacagaatacattttgagtacaaactg
acaggcaatttttcaaggcttaaagttgctcttgcttctctcccactctc
tgctctctctctctctctctaggctgctattttacagcttgaggctgcac
acactctgcattctcttgcacactctgccttttgcctgtgtgcttttttt
ttctcgaacactcacactcctacaaacctctgtgtgttcccctttcacac
acacatacacacacacacacacacacacacacacacacacacacaccaca
tgtactctcactcacaaacacacattctccatgcatacctcacattcttt
cttcactcacacctctctctctctctctctctctctctctctctctctct
c
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_85852663_85853263
seq2: B6Ng01-097K18.g_70_670

seq1  GAATTCTTCTATTTCATTAGGGGACATGGGCCTGTTTAGATAGTTTACCT  50
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTATATCATTAGGGGACATGGGCCTGTTTAGATAGTTTACCT  50

seq1  GCTCTTGATTTAAATTTGATACCTGTTATCTCTCTAGAAAATCATCCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTGATTTAAATTTGATACCTGTTATCTCTCTAGAAAATCATCCATT  100

seq1  TCATTTTTGATTTTCATTTCCAGTTTTAATGAGTAAAGGCTTTTATGTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTTGATTTTCATTTCCAGTTTTAATGAGTAAAGGCTTTTATGTTG  150

seq1  GGGTCCAGCCTCAATAAAGTATGTGAGTTCTCAACTGGAAGCAGGGATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCCAGCCTCAATAAAGTATGTGAGTTCTCAACTGGAAGCAGGGATAT  200

seq1  CTGGAAGGCACATAATAAATAAATACAGAATACATTTTGAGTACAAACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAGGCACATAATAAATAAATACAGAATACATTTTGAGTACAAACTG  250

seq1  ACAGGCAATTTTTCAAGGCTTAAAGTTGCTCTTGCTTCTCTCCCACTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCAATTTTTCAAGGCTTAAAGTTGCTCTTGCTTCTCTCCCACTCTC  300

seq1  TGCTCTCTCTCTCTCTCTCTAGGCTGCTATTTTACAGCTTGAGGCTGCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTCTCTCTCTCTCTCTAGGCTGCTATTTTACAGCTTGAGGCTGCAC  350

seq1  ACACTCTGCATTCTCTTGCACACTCTGCCTTTTGCCTGTGTGCTTTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCTGCATTCTCTTGCACACTCTGCCTTTTGCCTGTGTGCTTTTTTT  400

seq1  TTCTCGAACACTCACACTCCTACAAACCTCTGTGTGTTCCCCTTTCACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCGAACACTCACACTCCTACAAACCTCTGTGTGTTCCCCTTTCACAC  450

seq1  ACACATACACACACACACACACACACACACACACACACACACACACCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATACACACACACACACACACACACACACACACACACACACACCACA  500

seq1  TGTACTCTCACTCACAAACACACATTCTCCATGCATACCTCACATTCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTCTCACTCACAAACACACATTCTCCATGCATACCTCACATTCTTT  550

seq1  CTTCACTCACACCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACTCACACCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  600

seq1  C  601
      |
seq2  C  601