MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-098F20
Chromosome	2 (Build37)
Map Location	165,807,234 - 165,808,065
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Slc12a5, Ncoa5, Cd40, Cdh22, Slc35c2, Elmo2, Gm1008, Zfp334, 4833422F24Rik, Slc13a3, 2810408M09Rik, Slc2a10, Eya2, Prkcbp1, LOC546780
Downstream gene	Ncoa3, Sulf2, LOC670775, Ppia-ps2_2197.1, BC067047, Trp53rk, Arfgef2, LOC670802, Cse1l, Stau1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Slc12a5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:57138 MGI:1862037
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ncoa5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:228869 MGI:2385165
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cd40 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21939 MGI:88336
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 5 mRNAs

name	Cdh22 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:104010 MGI:1341843
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc35c2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:228875 MGI:2385166
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Elmo2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:140579 MGI:2153045
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	Gm1008 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381405 MGI:2685854
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zfp334 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:228876 MGI:2388656
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4833422F24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74614 MGI:1921864
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc13a3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:114644 MGI:2149635
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2810408M09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381406 MGI:1918294
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc2a10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:170441 MGI:2156687
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Eya2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14049 MGI:109341
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Prkcbp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:228880 MGI:1918025
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC546780 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:546780
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Ncoa3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17979 MGI:1276535
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sulf2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72043 MGI:1919293
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC670775 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:670775
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Ppia-ps2_2197.1 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383773
definition	note : peptidyl-prolyl cis-trans isomerase A pseudogene 2_2197.1 pseudo : _no_value

name	BC067047 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:277360 MGI:3040696
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Trp53rk (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76367 MGI:1914050
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Arfgef2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:99371 MGI:2139354
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 147 ESTs, 20 Proteins

name	LOC670802 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:670802
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs

name	Cse1l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110750 MGI:1339951
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Stau1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20853 MGI:1338864
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc12a5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33859679 GeneID:57138 MGI:1862037
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 12, member 5 transcript_id : NM_020333.1

name	Ncoa5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21450270 GeneID:228869 MGI:2385165
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nuclear receptor coactivator 5 transcript_id : NM_144892.1

name	Cd40 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70608199 GeneID:21939 MGI:88336
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CD40 antigen transcript_id : NM_170701.2

name	Cd40 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70608201 GeneID:21939 MGI:88336
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CD40 antigen transcript_id : NM_011611.2

name	Cd40 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70608112 GeneID:21939 MGI:88336
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CD40 antigen transcript_id : NM_170704.2

name	Cd40 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70608176 GeneID:21939 MGI:88336
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CD40 antigen transcript_id : NM_170702.2

name	Cd40 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70608142 GeneID:21939 MGI:88336
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CD40 antigen transcript_id : NM_170703.2

name	Cdh22 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31341388 GeneID:104010 MGI:1341843
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cadherin 22 transcript_id : NM_174988.2

name	Slc35c2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21450264 GeneID:228875 MGI:2385166
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 35, member C2 transcript_id : NM_144893.1

name	Elmo2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46877042 GeneID:140579 MGI:2153045
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : engulfment and cell motility 2, ced-12 homolog (C. elegans) transcript_id : NM_080287.2

name	Elmo2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46877051 GeneID:140579 MGI:2153045
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : engulfment and cell motility 2, ced-12 homolog (C. elegans) transcript_id : NM_207706.1

name	Elmo2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46877049 GeneID:140579 MGI:2153045
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : engulfment and cell motility 2, ced-12 homolog (C. elegans) transcript_id : NM_207705.1

name	Gm1008 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:53749213 GeneID:381405 MGI:2685854
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 1008, (NCBI) transcript_id : NM_001005425.1

name	Zfp334 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31341520 GeneID:228876 MGI:2388656
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 334 transcript_id : NM_178411.2

name	4833422F24Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21312817 GeneID:74614 MGI:1921864
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4833422F24 gene transcript_id : NM_029021.1

name	Slc13a3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892571 GeneID:114644 MGI:2149635
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3 transcript_id : NM_054055.2

name	2810408M09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:62510084 GeneID:381406 MGI:1918294
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2810408M09 gene transcript_id : NM_001007581.1

name	Slc2a10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133893061 GeneID:170441 MGI:2156687
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 2 (facilitated glucose transporter), member 10 transcript_id : NM_130451.2

name	Eya2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129931 GeneID:14049 MGI:109341
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : eyes absent 2 homolog (Drosophila) transcript_id : NM_010165.2

name	Prkcbp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:91064877 GeneID:228880 MGI:1918025
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein kinase C binding protein 1 transcript_id : NM_027230.3

name	Ncoa3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118026945 GeneID:17979 MGI:1276535
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nuclear receptor coactivator 3 transcript_id : NM_008679.2

name	Sulf2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801751 GeneID:72043 MGI:1919293
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sulfatase 2 transcript_id : NM_028072.4

name	LOC670775 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250258 GeneID:670775
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical LOC670775 transcript_id : XM_001481205.1

name	BC067047 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124517733 GeneID:277360 MGI:3040696
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC067047 transcript_id : NM_177782.3

name	Trp53rk (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130623 GeneID:76367 MGI:1914050
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transformation related protein 53 regulating kinase transcript_id : NM_023815.4

name	Arfgef2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94367432 GeneID:99371 MGI:2139354
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 147 ESTs, 20 Proteins product : ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) transcript_id : XM_130646.7

name	LOC670802 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250113 GeneID:670802
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs product : hypothetical LOC670802 transcript_id : XM_001480821.1

name	Cse1l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142356854 GeneID:110750 MGI:1339951
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chromosome segregation 1-like (S. cerevisiae) transcript_id : NM_023565.2

name	Stau1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130158 GeneID:20853 MGI:1338864
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : staufen (RNA binding protein) homolog 1 (Drosophila) transcript_id : NM_011490.2

name	Slc12a5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859680 GeneID:57138 MGI:1862037
definition	GO_component : GO:0016021 - integral to membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0005279 - amino acid-polyamine transporter activity [Evidence IEA]; GO:0015377 - cation:chloride symporter activity [Evidence IEA]; GO:0030955 - potassium ion binding [Evidence IEA]; GO:0015379 - potassium:chloride symporter activity [Evidence ISS] [Evidence IMP]; GO:0015293 - symporter activity [Evidence IEA] GO_process : GO:0006865 - amino acid transport [Evidence IEA]; GO:0006873 - cell ion homeostasis [Evidence ISS]; GO:0006821 - chloride transport [Evidence IMP]; GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]; GO:0007268 - synaptic transmission [Evidence IMP]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy product : solute carrier family 12, member 5 protein_id : NP_065066.1

name	Ncoa5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21450271 CCDS:CCDS17068.1 GeneID:228869 MGI:2385165
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA] GO_process : GO:0006412 - protein biosynthesis [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : nuclear receptor coactivator 5 protein_id : NP_659141.1

name	Cd40 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70608202 CCDS:CCDS17069.1 GeneID:21939 MGI:88336
definition	GO_component : GO:0009897 - external side of plasma membrane [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004888 - transmembrane receptor activity [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0042113 - B cell activation [Evidence IDA]; GO:0006955 - immune response [Evidence IEA]; GO:0030890 - positive regulation of B cell proliferation [Evidence IDA]; GO:0048304 - positive regulation of isotype switching to IgG isotypes [Evidence IDA]; GO:0050776 - regulation of immune response [Evidence IDA]; GO:0051023 - regulation of immunoglobulin secretion [Evidence IDA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; tumor necrosis factor receptor superfamily, member 5 product : tumor necrosis factor receptor superfamily, member 5 isoform 1 protein_id : NP_035741.2

name	Cd40 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70608177 CCDS:CCDS17070.1 GeneID:21939 MGI:88336
definition	GO_component : GO:0009897 - external side of plasma membrane [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004888 - transmembrane receptor activity [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0042113 - B cell activation [Evidence IDA]; GO:0006955 - immune response [Evidence IEA]; GO:0030890 - positive regulation of B cell proliferation [Evidence IDA]; GO:0048304 - positive regulation of isotype switching to IgG isotypes [Evidence IDA]; GO:0050776 - regulation of immune response [Evidence IDA]; GO:0051023 - regulation of immunoglobulin secretion [Evidence IDA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform 5 is encoded by transcript variant 5; tumor necrosis factor receptor superfamily, member 5 product : tumor necrosis factor receptor superfamily, member 5 isoform 5 protein_id : NP_733803.2

name	Cd40 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:24850129 GeneID:21939 MGI:88336
definition	GO_component : GO:0009897 - external side of plasma membrane [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004888 - transmembrane receptor activity [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0042113 - B cell activation [Evidence IDA]; GO:0006955 - immune response [Evidence IEA]; GO:0030890 - positive regulation of B cell proliferation [Evidence IDA]; GO:0048304 - positive regulation of isotype switching to IgG isotypes [Evidence IDA]; GO:0050776 - regulation of immune response [Evidence IDA]; GO:0051023 - regulation of immunoglobulin secretion [Evidence IDA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform 4 is encoded by transcript variant 4; tumor necrosis factor receptor superfamily, member 5 product : tumor necrosis factor receptor superfamily, member 5 isoform 4 protein_id : NP_733805.1

name	Cd40 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:24850127 CCDS:CCDS17071.1 GeneID:21939 MGI:88336
definition	GO_component : GO:0009897 - external side of plasma membrane [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004888 - transmembrane receptor activity [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0042113 - B cell activation [Evidence IDA]; GO:0006955 - immune response [Evidence IEA]; GO:0030890 - positive regulation of B cell proliferation [Evidence IDA]; GO:0048304 - positive regulation of isotype switching to IgG isotypes [Evidence IDA]; GO:0050776 - regulation of immune response [Evidence IDA]; GO:0051023 - regulation of immunoglobulin secretion [Evidence IDA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; tumor necrosis factor receptor superfamily, member 5 product : tumor necrosis factor receptor superfamily, member 5 isoform 2 protein_id : NP_733804.1

name	Cd40 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:24850125 GeneID:21939 MGI:88336
definition	GO_component : GO:0009897 - external side of plasma membrane [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004888 - transmembrane receptor activity [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0042113 - B cell activation [Evidence IDA]; GO:0006955 - immune response [Evidence IEA]; GO:0030890 - positive regulation of B cell proliferation [Evidence IDA]; GO:0048304 - positive regulation of isotype switching to IgG isotypes [Evidence IDA]; GO:0050776 - regulation of immune response [Evidence IDA]; GO:0051023 - regulation of immunoglobulin secretion [Evidence IDA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform 3 is encoded by transcript variant 3; tumor necrosis factor receptor superfamily, member 5 product : tumor necrosis factor receptor superfamily, member 5 isoform 3 protein_id : NP_733802.1

name	Cdh22 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27923931 CCDS:CCDS17073.1 GeneID:104010 MGI:1341843
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0007156 - homophilic cell adhesion [Evidence IEA] codon_start : 1 exception : mismatches in translation note : PB-cadherin product : cadherin 22 protein_id : NP_778153.1

name	Slc35c2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21450265 CCDS:CCDS17074.1 GeneID:228875 MGI:2385166
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : ovarian cancer overexpressed 1 product : solute carrier family 35, member C2 protein_id : NP_659142.1

name	Elmo2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46877043 CCDS:CCDS17075.1 GeneID:140579 MGI:2153045
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0008150 - biological_process [Evidence ND]; GO:0006909 - phagocytosis [Evidence IEA] codon_start : 1 note : isoform 3 is encoded by transcript variant 3 product : engulfment and cell motility 2, ced-12 homolog isoform 3 protein_id : NP_525026.2

name	Elmo2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46877052 CCDS:CCDS17076.1 GeneID:140579 MGI:2153045
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0008150 - biological_process [Evidence ND]; GO:0006909 - phagocytosis [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : engulfment and cell motility 2, ced-12 homolog isoform 2 protein_id : NP_997589.1

name	Elmo2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46877050 CCDS:CCDS17077.1 GeneID:140579 MGI:2153045
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0008150 - biological_process [Evidence ND]; GO:0006909 - phagocytosis [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : engulfment and cell motility 2, ced-12 homolog isoform 1 protein_id : NP_997588.1

name	Gm1008 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:53749214 CCDS:CCDS17078.1 GeneID:381405 MGI:2685854
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 note : novel protein containing zinc finger, C2H2 type domains product : hypothetical protein LOC381405 protein_id : NP_001005425.1

name	Zfp334 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30410744 CCDS:CCDS17079.1 GeneID:228876 MGI:2388656
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 exception : mismatches in translation product : zinc finger protein 334 protein_id : NP_848498.1

name	4833422F24Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312818 CCDS:CCDS17080.1 GeneID:74614 MGI:1921864
definition	GO_function : GO:0005267 - potassium channel activity [Evidence IEA] GO_process : GO:0006813 - potassium ion transport [Evidence IEA] codon_start : 1 note : novel protein containing a DC-STAMP-like protein domain product : hypothetical protein LOC74614 protein_id : NP_083297.1

name	Slc13a3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:16905091 CCDS:CCDS17081.1 GeneID:114644 MGI:2149635
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence IDA] GO_function : GO:0015362 - high affinity sodium:dicarboxylate symporter activity [Evidence IDA]; GO:0031402 - sodium ion binding [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006835 - dicarboxylic acid transport [Evidence IDA]; GO:0006811 - ion transport [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3 protein_id : NP_473396.1

name	2810408M09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:62510085 CCDS:CCDS17082.1 GeneID:381406 MGI:1918294
definition	codon_start : 1 note : novel protein similar to Trp53 regulating kinase (Trp53rk) product : hypothetical protein LOC381406 protein_id : NP_001007582.1

name	Slc2a10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18485498 CCDS:CCDS17083.1 GeneID:170441 MGI:2156687
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence TAS] GO_function : GO:0005355 - glucose transporter activity [Evidence ISS] GO_process : GO:0015758 - glucose transport [Evidence ISS] codon_start : 1 product : solute carrier family 2 member 10 protein_id : NP_569718.1

name	Eya2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859550 CCDS:CCDS17084.1 GeneID:14049 MGI:109341
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005730 - nucleolus [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0004721 - phosphoprotein phosphatase activity [Evidence IEA]; GO:0004725 - protein tyrosine phosphatase activity [Evidence IDA] GO_process : GO:0008632 - apoptotic program [Evidence IDA]; GO:0007275 - development [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA]; GO:0006470 - protein amino acid dephosphorylation [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : eyes absent 2 homolog protein_id : NP_034295.1

name	Prkcbp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:91064878 GeneID:228880 MGI:1918025
definition	GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : protein kinase C binding protein 1 protein_id : NP_081506.3

name	Ncoa3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:118026946 GeneID:17979 MGI:1276535
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0008415 - acyltransferase activity [Evidence IEA]; GO:0004402 - histone acetyltransferase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0003713 - transcription coactivator activity [Evidence IEA]; GO:0030528 - transcription regulator activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : nuclear receptor coactivator 3 protein_id : NP_032705.2

name	Sulf2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:61656167 CCDS:CCDS17086.1 GeneID:72043 MGI:1919293
definition	GO_component : GO:0009986 - cell surface [Evidence ISS]; GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0005615 - extracellular space [Evidence ISS] GO_function : GO:0004065 - arylsulfatase activity [Evidence ISS]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008449 - N-acetylglucosamine-6-sulfatase activity [Evidence ISS] GO_process : GO:0030201 - heparan sulfate proteoglycan metabolism [Evidence ISS]; GO:0006790 - sulfur metabolism [Evidence ISS] codon_start : 1 product : sulfatase 2 protein_id : NP_082348.2

name	LOC670775 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250259 GeneID:670775
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001481255.1

name	BC067047 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124517734 GeneID:277360 MGI:3040696
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005085 - guanyl-nucleotide exchange factor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0005089 - Rho guanyl-nucleotide exchange factor activity [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0035023 - regulation of Rho protein signal transduction [Evidence IEA] codon_start : 1 note : SET domain containing 6 product : hypothetical protein LOC277360 protein_id : NP_808450.2

name	Trp53rk (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560052 CCDS:CCDS17090.1 GeneID:76367 MGI:1914050
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence ISS] [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : TP53 regulating kinase; Trp53 regulating kinase product : Nori-2 protein protein_id : NP_076304.2

name	Arfgef2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82887368 GeneID:99371 MGI:2139354
definition	codon_start : 1 product : ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) protein_id : XP_130646.6

name	LOC670802 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250114 GeneID:670802
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480871.1

name	Cse1l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:12963737 CCDS:CCDS17092.1 GeneID:110750 MGI:1339951
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005643 - nuclear pore [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0008262 - importin-alpha export receptor activity [Evidence IEA]; GO:0008565 - protein transporter activity [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0008283 - cell proliferation [Evidence IEA]; GO:0000059 - protein import into nucleus, docking [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : chromosome segregation 1-like protein_id : NP_076054.1

name	Stau1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755674 CCDS:CCDS17093.1 GeneID:20853 MGI:1338864
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0005622 - intracellular [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IDA] GO_function : GO:0003725 - double-stranded RNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003723 - RNA binding [Evidence IDA] GO_process : GO:0008298 - intracellular mRNA localization [Evidence IDA] codon_start : 1 note : staufen product : staufen (RNA binding protein) homolog 1 protein_id : NP_035620.1

name	LOC546780 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:546780
definition	number : 1 pseudo : _no_value

clone name	MSMg01-365B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-162O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-050I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-168N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-306E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-206L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-233J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384G23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-128L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-265A17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-527O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114D14
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name		B6Ng01-098F20.g
ACC		DH908480
length		836
definition		DH908480\|Mus musculus domesticus DNA, BAC clone: B6Ng01-098F20, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence		gaattctaggctgccttcctgcctctgcctggtgagagctgggattgcta attaatgtcaccacaccctgctttgtctggggttctgagacgaggcatac tgaactgaaccttttgaaggtttagtccaggttcctttagaaagccactc cagcagggtggaggtggcacacacctttatcccagcactcaggaggcaga cgcaggtggatttctgagttagaggccagcctggtctacaaagtgagttc caggacagccagggctatatagagaaaccctgtctcgaaaaaccaacaac aacaacaacaacaaacaaacaaacaaacaaaaataacaaaacaaacaaac aaaaaaaaagaaagccactctccgggctcttgttcacatgttcactttgg aaagtctacttcgacttctgataagattttgggagaccgatctgtcttgg ttgtctctctgtaccagctgctcaaactgtgggttgagatcctttctttg ggagctgaatgaccctttagtaggaaacacagatatttacacaaaagtag caaaactgcagttataaagtagcagtgacaataattttaatggttggggg tcactatagcatgcagaactgtcttaaaaggtcacagcattaggaaggct gagagcactgctctaaattcttgaatttgaaggacttcctcccaactggc agtggaacccagggccttgggcaagctaggcagggaatgtccaccagtga cctgcacagaacaccctcagctcttcatagatggctttttaggcaaacac cctagcacttgaaagctagctctcaccctacctttt
quality values		Open. Hide. 55 61 49 49 55 55 20 12 9 7 7 12 9 9 9 9 19 20 27 37 61 61 61 61 59 59 59 59 59 59 61 61 59 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 43 33 20 23 19 12 18 25 25 21 25 26 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 59 59 59 61 59 61 59 52 59 59 59 59 59 61 61 61 61 61 49 52 44 49 52 52 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 59 59 59 59 59 59 59 59 59 61 61 59 61 61 59 59 59 59 59 59 59 59 59 52 52 59 59 59 61 61 59 61 61 59 59 61 61 61 61 59 52 59 52 59 45 52 59 59 59 59 52 59 52 59 59 49 43 59 52 50 59 52 45 34 59 59 59 59 59 59 49 59 52 31 52 36 28 61 59 59 61 61 59 59 59 59 59 59 61 49 61 59 59 52 61 59 61 59 61 59 59 61 59 59 59 44 52 59 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 59 59 61 61 59 52 52 59 55 43 52 52 61 61 61 61 61 59 59 59 52 61 59 59 59 59 59 52 52 52 59 39 52 52 49 43 59 59 59 59 59 59 45 39 43 44 36 39 59 49 52 59 43 52 59 41 59 52 39 49 52 36 45 59 59 59 59 59 59 49 52 59 59 52 41 52 52 39 52 49 43 59 52 44 52 49 34 43 52 45 45 49 43 59 59 39 52 52 52 52 52 59 61 61 61 59 61 61 44 59 59 45 39 38 45 30 36 59 43 59 52 55 35 59 61 52 59 59 49 52 59 52 49 59 36 59 61 61 61 52 43 38 39 41 36 44 59 59 52 59 59 59 49 49 52 49 49 52 52 59 59 34 59 59 59 59 52 45 52 59 52 52 61 52 59 61 61 61 61 61 59 59 59 59 61 59 59 52 61 61 59 59 32 24 24 14 23 43 59 59 59 59 49 52 52 59 59 59 61 61 61 61 59 59 59 41 59 59 52 43 41 43 43 43 52 52 40 59 43 52 59 59 49 49 59 59 52 52 52 43 39 49 49 61 49 55 61 52 55 55 52 49 49 52 52 49 61 61 55 52 52 49 43 43 43 37 52 24 24 16 28 24 34 55 55 55 52 52 52 37 32 55 55 50 55 50 41 43 43 26 43 26 26 32 41 31 61 61 38 43 38 26 49 49 37 43 49 35 24 27 31 43 55 55 55 43 31 27 15 21 15 43 39 37 50 49 43 49 27 36 38 18 20 8 50 50 29 53 61 52 61 47 38 37 37 43 43 50 30 35 39 43 35 32 35 35 32 19 29 28 50 50 50 39 16 43 47 24 39 53 53 45 45 39 39 39 42 39 40 43 21 33 31 39 34 27 50 39 61 39 31 16 46 37 31 20 43 22 31 27 53 21 45 27 28 31 34 50 47 53 47 52 32 28 35 27 27 20 27 17 18 17 28 24 10 45 20 17 36 38 8 27 29 10 27 27 23 29 35 36 30 28 22 28 45 45 30 35 29 30 30 24 28 27 45 30 23 32 16 31 33 17 32 21 19 21 32 38 20 31 37 22 31 17 39 39 35 34 37 28 38 17 52 37 52 53 14 38 29 20 17 14 16 13 34 22 20 23 36 18 30 21 33 33 45 34 41 38 53 36 24 34 20 45 32 35 39 28 21 19 13 17 42 50 25 24 29 26 22 42 42 36 17 22 17 52 40 40 38 39 32 38 28 16 28 33 27 14 20 16 13 9 19 38 25 25 32 8 12 26 27 38 24 17 34 17 27 31 34 35 40 33 29 29 20 24 34 36 31 18 16 7 37 47 37

Alignment Information

BAC End 1

BAC End 2

seq1: chr2_165807234_165808065
seq2: B6Ng01-098F20.g_67_902

seq1  GAATTCTAGGCTGCCTTCCTGCCTCTGCCTGGTGAGAGCTGGGATTGCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGGCTGCCTTCCTGCCTCTGCCTGGTGAGAGCTGGGATTGCTA  50

seq1  ATTAATGTCACCACACCCTGCTTTGTCTGGGGTTCTGAGACGAGGCATAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATGTCACCACACCCTGCTTTGTCTGGGGTTCTGAGACGAGGCATAC  100

seq1  TGAACTGAACCTTTTGAAGGTTTAGTCCAGGTTCCTTTAGAAAGCCACTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTGAACCTTTTGAAGGTTTAGTCCAGGTTCCTTTAGAAAGCCACTC  150

seq1  CAGCAGGGTGGAGGTGGCACACACCTTTATCCCAGCACTCAGGAGGCAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGGGTGGAGGTGGCACACACCTTTATCCCAGCACTCAGGAGGCAGA  200

seq1  CGCAGGTGGATTTCTGAGTTAGAGGCCAGCCTGGTCTACAAAGTGAGTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAGGTGGATTTCTGAGTTAGAGGCCAGCCTGGTCTACAAAGTGAGTTC  250

seq1  CAGGACAGCCAGGGCTATATAGAGAAACCCTGTCTCGAAAAACCAACAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACAGCCAGGGCTATATAGAGAAACCCTGTCTCGAAAAACCAACAAC  300

seq1  AACAACAACAACAAACAAACAAACAAACAAAAATAACAAAACAAACAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACAACAACAAACAAACAAACAAACAAAAATAACAAAACAAACAAAC  350

seq1  AAAAAAAAAGAAAGCCACTCTCCGGGCTCTTGTTCACATGTTCACTTTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAGAAAGCCACTCTCCGGGCTCTTGTTCACATGTTCACTTTGG  400

seq1  AAAGTCTACTTCGACTTCTGATAAGATTTTGGGAGACCGATCTGTCTTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCTACTTCGACTTCTGATAAGATTTTGGGAGACCGATCTGTCTTGG  450

seq1  TTGTCTCTCTGTACCAGCTGCTCAAACTGTGGGTTGAGATCCTTTCTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTCTCTGTACCAGCTGCTCAAACTGTGGGTTGAGATCCTTTCTTTG  500

seq1  GGAGCTGAATGACCCTTTAGTAGGAAACACAGATATTTACACAAAAGTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTGAATGACCCTTTAGTAGGAAACACAGATATTTACACAAAAGTAG  550

seq1  CAAAACTGCAGTTATAAAGTAGCAGTGACAATAA-TTTAATGGTTGGGGG  599
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CAAAACTGCAGTTATAAAGTAGCAGTGACAATAATTTTAATGGTTGGGGG  600

seq1  TCACTATAGCATGCAGAACTGTCTTAAAAGGTCACAGCATTAGGAAGGCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTATAGCATGCAGAACTGTCTTAAAAGGTCACAGCATTAGGAAGGCT  650

seq1  GAGAGCACTGCTCTAAATTCTTGAA-TTGAAGGACTTCCTCCCAACTGGC  698
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GAGAGCACTGCTCTAAATTCTTGAATTTGAAGGACTTCCTCCCAACTGGC  700

seq1  AGTGGAACCCAGGGCCTTGGGCAAGCTAGGCAGGGAATGTCCACCAGTGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGAACCCAGGGCCTTGGGCAAGCTAGGCAGGGAATGTCCACCAGTGA  750

seq1  CCTGCACAGAACA-CCTCAGCTCTTCATAGATGGC-TTTTAGGCAAACAC  796
      ||||||||||||| ||||||||||||||||||||| ||||||||||||||
seq2  CCTGCACAGAACACCCTCAGCTCTTCATAGATGGCTTTTTAGGCAAACAC  800

seq1  CCTAGCAACTGAAAGCTAGCTCTCACCCTACCTTTT  832
      |||||||  |||||||||||||||||||||||||||
seq2  CCTAGCACTTGAAAGCTAGCTCTCACCCTACCTTTT  836

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information