BAC Information

Click to search

BAC

Clone NameB6Ng01-099G14
Chromosome2 (Build37)
Map Location 84,324,591 - 84,325,399
singlet/doubletsinglet
Overlap genenone
Upstream geneZc3h15, Itgav, Dnmt3l-ps1, D430039N05Rik, Zswim2, LOC668096, LOC668100, LOC545432, LOC668107, LOC668113, LOC668115, LOC668119, LOC383725, Calcrl, Tfpi
Downstream geneLOC672763, Ctnnd1, 2700094K13Rik, Txndc14, Med19, Zdhhc5, Clp1, Ypel4, Serping1, Ube2l6, Smtnl1, Timm10, Slc43a1, Rtn4rl2, Slc43a3, Prg2, Prg3, P2rx3, Ssrp1, Tnks1bp1, Agtrl1, LOC625033, Lrrc55, Olfr987, GA_x5J8B7W531T-1241080-1240524, Olfr988, GA_x5J8B7W531T-1286425-1285652, Olfr990-ps1, Olfr991-ps1, Olfr992, Olfr993, Olfr994, Olfr995, 4833423E24Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-099G14.b
ACCDH909211
length944
definitionDH909211|Mus musculus domesticus DNA, BAC clone: B6Ng01-099G14, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagtactgaggaggtagagacaggatgccccctggatctcatgg
tccatccacctagacaactggataaactccaagccagagagagatcctgt
cctcaaaaacagaagaagaaaaagaaaaaggtttttaaactgcatgacac
tggaagaacaccacccaaggttgacctcttggcttccatacgaatgctca
tacaaccatatatccatgtacatgtacatgaatatataccaaaaaataag
gaaaacgtgaaatcacatgagaagtcaaggggtttgagcagaaaaaaatg
attttttttagtgtttttattctttgaaagtttcatacatgtatacagca
tattttactatcttcatttccaataccctctctcatacccctccctcttc
tgctgaagcccttcatcaccggaagctcccctttaacctttacgtctttt
tatgtttagttgcccactaaatgtcattatgcctgctcacacaagcatgt
aggatgatagctactggagcatgggcaatgtttcaatgggcacaccacta
agaaaagtgaccacctagccaccatggactgacttcctcaggaataggca
gggcctcgagcatcgcagcgtcgtggcccagccactatgaagtgttgacg
ggccagtcacgtgcagatgctctgtaggggagaggcggaggggaagcacc
gctgcgcgagtcggtgatcgcaatcgccatcttacattcccgaagacatc
tttttgcggcacaccaccttttcctctgtctctttacattgttatcatcc
ttttgtccgtgttcctggagcctgggaggggtggtacaaatgtcctattt
agagtcaattattgcagtatccacttcttttggtgctttgacccgttatg
agcctgtggcattagcctccacctgaaactctagagactcctct
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_84324591_84325399
seq2: B6Ng01-099G14.b_47_857

seq1  GAATTCCAGTACTGAGGAGGTAGAGACAGGATGCCCCCTGGATCTCATGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTACTGAGGAGGTAGAGACAGGATGCCCCCTGGATCTCATGG  50

seq1  TCCATCCACCTAGACAACTGGATAAACTCCAAGCCAGAGAGAGATCCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCCACCTAGACAACTGGATAAACTCCAAGCCAGAGAGAGATCCTGT  100

seq1  CCTCAAAAACAGAAGAAGAAAAAGAAAAAGGTTTTTAAACTGCATGACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAAAAACAGAAGAAGAAAAAGAAAAAGGTTTTTAAACTGCATGACAC  150

seq1  TGGAAGAACACCACCCAAGGTTGACCTCTTGGCTTCCATACGAATGCTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGAACACCACCCAAGGTTGACCTCTTGGCTTCCATACGAATGCTCA  200

seq1  TACAACCATATATCCATGTACATGTACATGAATATATACCAAAAAATAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAACCATATATCCATGTACATGTACATGAATATATACCAAAAAATAAG  250

seq1  GAAAACGTGAAATCACATGAGAAGTCAAGGGGTTTGAGCAGAAAAAAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACGTGAAATCACATGAGAAGTCAAGGGGTTTGAGCAGAAAAAAATG  300

seq1  ATTTTTTTTAGTGTTTTTATTCTTTGAAAGTTTCATACATGTATACAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTTAGTGTTTTTATTCTTTGAAAGTTTCATACATGTATACAGCA  350

seq1  TATTTTACTATCTTCATTTCCAATACCCTCTCTCATACCCCTCCCTCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTACTATCTTCATTTCCAATACCCTCTCTCATACCCCTCCCTCTTC  400

seq1  TGCTGAAGCCCTTCATCACCGGAAGCTCCCCTTTAACCTTTACGTCTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAAGCCCTTCATCACCGGAAGCTCCCCTTTAACCTTTACGTCTTTT  450

seq1  TATGTTTAGTTGCCCACTAAATGTCATTATGCCTGCTCACACAAGCATGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTTAGTTGCCCACTAAATGTCATTATGCCTGCTCACACAAGCATGT  500

seq1  AGGATGATAGCTACTGGAGCATGGGCAATGTTTCAATGGGCACACCACTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGATAGCTACTGGAGCATGGGCAATGTTTCAATGGGCACACCACTA  550

seq1  AGAAAAGTGACCACCTAGCCACCATGGACTGACTTCCTCAGGAATAGGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGTGACCACCTAGCCACCATGGACTGACTTCCTCAGGAATAGGCA  600

seq1  GGGCCTCGAGCATCGCAGCGTCGTGGCCCAGCCACTATGAAGTGTTGACG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTCGAGCATCGCAGCGTCGTGGCCCAGCCACTATGAAGTGTTGACG  650

seq1  GGCCAGTCACGTGCAGATGCTCTGTAGGGGAGAGGCGGAGGGGAAGCACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGTCACGTGCAGATGCTCTGTAGGGGAGAGGCGGAGGGGAAGCACC  700

seq1  GCTGCGCGAGTCGGTGATCGCAATCGCCATCTTACATT-CCGAAGACATC  749
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GCTGCGCGAGTCGGTGATCGCAATCGCCATCTTACATTCCCGAAGACATC  750

seq1  TTTTTGCGGCACACCACCTTTTCCTCTGTCTC-TTACATTGTTATCATCC  798
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TTTTTGCGGCACACCACCTTTTCCTCTGTCTCTTTACATTGTTATCATCC  800

seq1  TTTTGTCCGTG  809
      |||||||||||
seq2  TTTTGTCCGTG  811