BAC Information

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BAC

Clone NameB6Ng01-099K03
Chromosome2 (Build37)
Map Location 112,651,713 - 112,759,567
singlet/doubletdoublet
Overlap geneRyr3
Upstream geneOlfr1303, Olfr249-ps1, LOC668825, Olfr1305, Olfr1306, LOC668827, Olfr1307, Olfr1308, Olfr1309, LOC433463, Olfr1310, Olfr1311, Olfr1312, Olfr1313, Olfr1314, Olfr1315-ps1, Olfr1316, Olfr1317, Olfr1318, GA_x5J8B7W3P0G-705890-705633, LOC100043187, Agpat7, Nut, Nola3, Slc12a6, Tmem85, EG668839, 2410042D21Rik, 2900064A13Rik, Chrm5, Aven
Downstream gene4930563P21Rik, Fmn1, Grem1, LOC100043520, Scg5, Arhgap11a, LOC100043526
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-099K03.bB6Ng01-099K03.g
ACCDH909374DH909375
length1,202859
definitionDH909374|Mus musculus domesticus DNA, BAC clone: B6Ng01-099K03, 5' end.DH909375|Mus musculus domesticus DNA, BAC clone: B6Ng01-099K03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(112,651,713 - 112,652,925)(112,758,706 - 112,759,567)
sequence
gaattctgttatctttcaaataatacatttaaaaaaagataaaagcatat
agttcttttccaaagaaaaattgggaaatatattaataagtgtgtagtta
tacattttaattattttagatgaactagcatttaaaatgctgcattttta
atttctaagtaagtaaatactgatatataaacagcctagattagagctct
aatatttgtgaatttgaaaaatctccaagaccaaaaacctttgaccctca
ttgctggatggaccacatctcttacaaagcaaaagctgtcatccctcgac
aacaaagctatttctccagctttggtaaccccactccatcaggttgtgtg
attttgattagtgaaccaagacttccatctagaaagatacagtttaagga
tatttctttgcttggattaaaagtgagttcatgagagcaagactcctcat
attgagaaatagagtgaggattaaagaatcgttattttgagaattgaatc
ctggaggttaagggctctgaccattattcacagggcagtaaagtgctctc
tgttagcttgaagggctctgaaagtttcctccttaatttgagctaaattt
gggcttaagaccagtcatcttcagagaagggaggtggtgagtctgtgtta
ttcagtggttatatggccttctctggttggttctgtagcactggaagttc
attgtagcatcagtgagctttcaggagccaggatttatgtcacggacatc
tttctgcctatcattgactgaaaaccaagtgacatcctgtagggtcactt
ctaaattagcttctgaatcaaatgctattttatggggatttttctaggtg
ctcaagaccaaccttgttaggtgcctctgtaaaatcatttcagaacacca
ttattgcccataggtccctaggtggggaaactcaaaaatgtatgtaagtt
atttggtcatgtctaattggcttctaaatatttgtattaatacccataaa
ctgggctactctgcctgggtagagaagccttcttttgcagtgggcagcag
ctaatacagaaatgaatagctgttcaaagtggataaagacgaagaagtga
gaagagactagtgttcagccctaagtggatatttgtataacacttcagcc
tctccacgtggctcagatgaaatgaagagaagataaagaatgaaggacta
ga
gaattcactctcataagtatatgattcagtgagatttaatagatttacag
agctgtgtacagtgatcaccatgattaagttttagaatatttccatttcc
ctacaatctcttatgctcctaagttcagtttagttgccactcatagccct
gtctttgaactaaaattattatattgattaaataagatagatcatccttt
gaatctacccttttcactcagtattatatttttgtggttcattcatgttg
tcttcttaaattactgaacactatctgtattcttatatttgtatatatgt
ataaagtgtgcatgtgtgtatattaggcttatctataaagaaatggatac
acattttatatttataatttgaaccatgaattatattcatttttatcatt
ttataggtgatgcctatatatgtgtgtgtgtgtataagttttcagttata
tactttcatttcctctctctctctctctctctctctctctctctgtgtgt
gtgtgtgtgtgtgtgtgtgtgtgtgcgtgcgtgcgtgtgtgatgtcatgt
gtatggaaggaggcacttctgtgtattcttgtgttcagtccagaagtcaa
tgtcaagtttcttctattgtgttcctccttaattctggagacagactctc
ttgaacatggtggaacttgctaattggctagactgatctctgctcccccc
acccagtatgccagtcaccagcactcaccatgatgactagtttttgaaag
gtcttgggaatccaaactcagtcctctctatcacagcaaaaacatttctt
tcaaagcctctccccagttccctttttagccatttaggtgtcatctcagg
ggtttgagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_112651713_112652925
seq2: B6Ng01-099K03.b_47_1248

seq1  GAATTCTGTTATCTTTCAAATAATACATTTAAAAAAAGATAAAAGCATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTATCTTTCAAATAATACATTTAAAAAAAGATAAAAGCATAT  50

seq1  AGTTCTTTTCCAAAGAAAAATTGGGAAATATATTAATAAGTGTGTAGTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTTTTCCAAAGAAAAATTGGGAAATATATTAATAAGTGTGTAGTTA  100

seq1  TACATTTTAATTATTTTAGATGAACTAGCATTTAAAATGCTGCATTTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTTAATTATTTTAGATGAACTAGCATTTAAAATGCTGCATTTTTA  150

seq1  ATTTCTAAGTAAGTAAATACTGATATATAAACAGCCTAGATTAGAGCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTAAGTAAGTAAATACTGATATATAAACAGCCTAGATTAGAGCTCT  200

seq1  AATATTTGTGAATTTGAAAAATCTCCAAGACCAAAAACCTTTGACCCTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTGTGAATTTGAAAAATCTCCAAGACCAAAAACCTTTGACCCTCA  250

seq1  TTGCTGGATGGACCACATCTCTTACAAAGCAAAAGCTGTCATCCCTCGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGGATGGACCACATCTCTTACAAAGCAAAAGCTGTCATCCCTCGAC  300

seq1  AACAAAGCTATTTCTCCAGCTTTGGTAACCCCACTCCATCAGGTTGTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAGCTATTTCTCCAGCTTTGGTAACCCCACTCCATCAGGTTGTGTG  350

seq1  ATTTTGATTAGTGAACCAAGACTTCCATCTAGAAAGATACAGTTTAAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGATTAGTGAACCAAGACTTCCATCTAGAAAGATACAGTTTAAGGA  400

seq1  TATTTCTTTGCTTGGATTAAAAGTGAGTTCATGAGAGCAAGACTCCTCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTTTGCTTGGATTAAAAGTGAGTTCATGAGAGCAAGACTCCTCAT  450

seq1  ATTGAGAAATAGAGTGAGGATTAAAGAATCGTTATTTTGAGAATTGAATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGAAATAGAGTGAGGATTAAAGAATCGTTATTTTGAGAATTGAATC  500

seq1  CTGGAGGTTAAGGGCTCTGACCATTATTCACAGGGCAGTAAAGTGCTCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGGTTAAGGGCTCTGACCATTATTCACAGGGCAGTAAAGTGCTCTC  550

seq1  TGTTAGCTTGAAGGGCTCTGAAAGTTTCCTCCTTAATTTGAGCTAAATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGCTTGAAGGGCTCTGAAAGTTTCCTCCTTAATTTGAGCTAAATTT  600

seq1  GGGCTTAAGACCAGTCATCTTCAGAGAAGGGAGGTGGTGAGTCTGTGTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTAAGACCAGTCATCTTCAGAGAAGGGAGGTGGTGAGTCTGTGTTA  650

seq1  TTCAGTGGTTATATGGCCTTCTCTGGTTGGTTCTGTAGCACTGGAAGTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTGGTTATATGGCCTTCTCTGGTTGGTTCTGTAGCACTGGAAGTTC  700

seq1  ATTGTAGCATCAGTGAGCTTTCAGGAGCCAGGATTTATGTCACGGACATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTAGCATCAGTGAGCTTTCAGGAGCCAGGATTTATGTCACGGACATC  750

seq1  TTTCTGCCTATCATTGACTGAAAACCAAGTGACATCCTGTAGGGTCACTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGCCTATCATTGACTGAAAACCAAGTGACATCCTGTAGGGTCACTT  800

seq1  CTAAATTAGCTTCTGAATCAAATGCTATTTTATGGGGATTTTTCTAGGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATTAGCTTCTGAATCAAATGCTATTTTATGGGGATTTTTCTAGGTG  850

seq1  CTCAAGACCAACCTTGTTAGGTGCCTCTGTAAAATCATTTCAGAACACCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGACCAACCTTGTTAGGTGCCTCTGTAAAATCATTTCAGAACACCA  900

seq1  TTATTGCCCATAGGTCCCTAGGTGGGGAAACTCAAAAATGTATGTAAGTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGCCCATAGGTCCCTAGGTGGGGAAACTCAAAAATGTATGTAAGTT  950

seq1  ATTTGGTCATGTCTAATTGGCTTCTAAATATTTGTATTAATACCCATAAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGTCATGTCTAATTGGCTTCTAAATATTTGTATTAATACCCATAAA  1000

seq1  CTGGGCTACTCTGCCTGGGTCAGAGAAGCCTCCTTTTGCAGTGGGCAGCA  1050
      |||||||||||||||||||| |||||||||| ||||||||||||||||||
seq2  CTGGGCTACTCTGCCTGGGT-AGAGAAGCCTTCTTTTGCAGTGGGCAGCA  1049

seq1  GCTAATACAGAAATGAATAGCTGTTCAAAGT-GATAAAGAACGAAG-AGT  1098
      ||||||||||||||||||||||||||||||| ||||||| |||||| |||
seq2  GCTAATACAGAAATGAATAGCTGTTCAAAGTGGATAAAG-ACGAAGAAGT  1098

seq1  GAAGAAGAGACTAAGTGTTCAGCCCTAAGTGGGATATTTGTATTAACACT  1148
      | |||||||||| ||||||||||||||||| ||||||||||| |||||||
seq2  G-AGAAGAGACT-AGTGTTCAGCCCTAAGT-GGATATTTGTA-TAACACT  1144

seq1  CCAGCC-CTCCACCGTGGCTCAGGAAATGAAATGGAAGAGAGGGTATAAA  1197
       ||||| ||||| ||||||||||   ||||||| ||||||| |  |||||
seq2  TCAGCCTCTCCA-CGTGGCTCAG---ATGAAAT-GAAGAGAAG--ATAAA  1187

seq1  GAATGAAGGAACTAGA  1213
      ||||||||| ||||||
seq2  GAATGAAGG-ACTAGA  1202

seq1: chr2_112758706_112759567
seq2: B6Ng01-099K03.g_69_926 (reverse)

seq1  CTCAAAGCCACTGAGATGACACCTAGAAATGGCT-AAAATGGAACTGGGG  49
      |||||| || ||||||||||||||  |||||||| |||| ||||||||||
seq2  CTCAAA-CCCCTGAGATGACACCT--AAATGGCTAAAAAGGGAACTGGGG  47

seq1  AGAGGGCTCTGAAAGAAATGTGTTTGCTGTGATAGAGAGGACTGAGTTTG  99
      ||| |||| |||||||||||| ||||||||||||||||||||||||||||
seq2  AGA-GGCTTTGAAAGAAATGTTTTTGCTGTGATAGAGAGGACTGAGTTTG  96

seq1  GATTCCCAAGACCTATTCAAAAACTAGTCATCATGGTGAGTGCTGGTGAC  149
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GATTCCCAAGACCT-TTCAAAAACTAGTCATCATGGTGAGTGCTGGTGAC  145

seq1  TGGCATACTGGGTGGTGGGAGCAGAGATCAGTCTAGCCAATTAGCAAGTT  199
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TGGCATACTGGGTGGGGGGAGCAGAGATCAGTCTAGCCAATTAGCAAGTT  195

seq1  CCACCATGTTCAAGAGAGTCTGTCTCCAGAATTAAGGAGGAACACAATAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCATGTTCAAGAGAGTCTGTCTCCAGAATTAAGGAGGAACACAATAG  245

seq1  AAGAAACTTGACATTGACTTCTGGACTGAACACAAGAATACACAGAAGTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAACTTGACATTGACTTCTGGACTGAACACAAGAATACACAGAAGTG  295

seq1  CCTCCTTCCATACACATGACATCACACACGCACGCACGCACACACACACA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTTCCATACACATGACATCACACACGCACGCACGCACACACACACA  345

seq1  CACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  395

seq1  GGAAATGAAAGTATATAACTGAAAACTTATACACACACACACATATATAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATGAAAGTATATAACTGAAAACTTATACACACACACACATATATAG  445

seq1  GCATCACCTATAAAATGATAAAAATGAATATAATTCATGGTTCAAATTAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCACCTATAAAATGATAAAAATGAATATAATTCATGGTTCAAATTAT  495

seq1  AAATATAAAATGTGTATCCATTTCTTTATAGATAAGCCTAATATACACAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATAAAATGTGTATCCATTTCTTTATAGATAAGCCTAATATACACAC  545

seq1  ATGCACACTTTATACATATATACAAATATAAGAATACAGATAGTGTTCAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACACTTTATACATATATACAAATATAAGAATACAGATAGTGTTCAG  595

seq1  TAATTTAAGAAGACAACATGAATGAACCACAAAAATATAATACTGAGTGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTAAGAAGACAACATGAATGAACCACAAAAATATAATACTGAGTGA  645

seq1  AAAGGGTAGATTCAAAGGATGATCTATCTTATTTAATCAATATAATAATT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGTAGATTCAAAGGATGATCTATCTTATTTAATCAATATAATAATT  695

seq1  TTAGTTCAAAGACAGGGCTATGAGTGGCAACTAAACTGAACTTAGGAGCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTCAAAGACAGGGCTATGAGTGGCAACTAAACTGAACTTAGGAGCA  745

seq1  TAAGAGATTGTAGGGAAATGGAAATATTCTAAAACTTAATCATGGTGATC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGATTGTAGGGAAATGGAAATATTCTAAAACTTAATCATGGTGATC  795

seq1  ACTGTACACAGCTCTGTAAATCTATTAAATCTCACTGAATCATATACTTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTACACAGCTCTGTAAATCTATTAAATCTCACTGAATCATATACTTA  845

seq1  TGAGAGTGAATTC  862
      |||||||||||||
seq2  TGAGAGTGAATTC  858