BAC Information

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BAC

Clone NameB6Ng01-100I22
Chromosome2 (Build37)
Map Location 85,811,792 - 85,812,386
singlet/doubletsinglet
Overlap genenone
Upstream genePrg2, Prg3, P2rx3, Ssrp1, Tnks1bp1, Agtrl1, LOC625033, Lrrc55, Olfr987, GA_x5J8B7W531T-1241080-1240524, Olfr988, GA_x5J8B7W531T-1286425-1285652, Olfr990-ps1, Olfr991-ps1, Olfr992, Olfr993, Olfr994, Olfr995, 4833423E24Rik, Olfr996, Olfr997-ps1, Olfr998, Olfr999-ps1, Olfr1000, Olfr1001-ps1, Olfr1002, GA_x5J8B7W531T-1558688-1559570, Olfr1004-ps1, Olfr154, GA_x5J8B7W531T-1577060-1577325, Olfr1006, GA_x5J8B7W531T-1588603-1588734, Olfr1008, Olfr1009, Olfr1010, Olfr1012, Olfr1013, Olfr1014, Olfr1015, Olfr1016, GA_x5J8B7W3KVV-518538-519236, Olfr1018, Olfr1019, Olfr1020, Olfr1021-ps1, Olfr1022, Olfr1023, Olfr1024, Olfr1025-ps1, Olfr1026, Olfr1027-ps1, Olfr1028
Downstream geneOlfr1029, Olfr1030, Olfr1031, Olfr1032, LOC100042075, Olfr1033, Olfr1034, Olfr1533-ps1, Olfr1035-ps1, Olfr1036, Olfr1037, LOC100041372, Olfr1038, Olfr1039, Olfr1040, GA_x5J8B7W3KVV-170014-170572, Olfr1042, Olfr1043, Olfr1044, Olfr52, Olfr1045, Olfr1046, Olfr1047, Olfr1048, Olfr1049, Olfr1050-ps1, Olfr1051, GA_x5J8B7W3KVV-25848-25992, Olfr1052, Olfr1053-ps1, Olfr1054, Olfr1055, Olfr1056, Olfr1057, GA_x5J8B7TRQ4E-1174-939, Olfr1058, Olfr1059-ps1, Olfr1515, Olfr1062, Olfr1063-ps1, Olfr1064-ps1, Olfr1065, Olfr1066, Olfr1069-ps1, Olfr1070-ps1, Olfr228, Olfr1073-ps1, Olfr1075-ps1, GA_x5J8B7W4CQV-104617-103730, Olfr1076, LOC625853, Olfr1078-ps1, GA_x5J8B7W4CQV-78329-78805, Olfr1079, Olfr1080, Olfr1081-ps1, Olfr1082, GA_x5J8B7W4CQV-18360-18784, Olfr1083, Olfr1084, Olfr1085, Olfr1086, Olfr1087, Olfr1088-ps1, Olfr1089, Olfr1090, Olfr1091-ps1, GA_x5J8B7W3Y5M-123838-124302, Olfr1093, Olfr141, Olfr1094, Olfr1095, Olfr1096-ps1, Olfr1097, Olfr1098, Olfr1099
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-100I22.bB6Ng01-100I22.g
ACCDH910022DH910023
length590496
definitionDH910022|Mus musculus domesticus DNA, BAC clone: B6Ng01-100I22, 5' end.DH910023|Mus musculus domesticus DNA, BAC clone: B6Ng01-100I22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
actttcctagggtccctggtgattattgaccttactaactgaaataatgt
gaggagacattgacttggctttatgtacagggagatttcattccttagta
taggaatgaaagatatgtaactatctttagtagttacatagtttaataaa
aaattaaatagcattctttaatagatgttctataatactgtaactattct
gaattcattctcatcacaaatagacaaaatatgttaacaaatttcttgtc
aactaaaatcattgatcataggcctaatgatacatggggaaattctattt
tactatctacatttattgaaaatgaagtgtatctgaaaggatgaaaatct
aggaaggttacacacacacaaatgtgagcatgcacgtgtgtgtgtgtgtg
tgtgtgtgtgtgtgtgtgtgtatatattcataaaaagttagtggaacaaa
ggacctaatactaagaggaaaactaaggacttgtaagtaccaggcaggtg
agcaatattatctgtgcacttcagtgtatatgaaattttctatttgtaga
aaaattgtcttgtttcagtacaatatatcatgcatgataa
tgaagaagtggaggtggtatgagtgtaagccaaaaggaaatatagggaca
aagtgtgtaacaaaggaaaggccatctagagtctgccccacctggggatc
catcccatatacagacaccaaacctagacactattgcagatgccaagaag
tgctcattaacagaagcctactatagctgtctcctgagagtctctgtcag
agcctgacaaatatagaggcagatgcttgcagccaaccattgcactgagc
atgtctccaatggagaacttatagaaaggactgaaaaagctgaaggggtt
aacaaccccataggaagaacaacaatatcaaccaaccagagcctcagagc
tctcagggactaaaccaccaacaaaagagtacacatggttgtacttgtca
tgtgtcaatggtaggagaggcccttggttctgtgaatgctcaatgcccca
ggataggggaatgccaggacagtgaggtgggagtgggtgggtggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_85811792_85812386
seq2: B6Ng01-100I22.b_45_640 (reverse)

seq1  TTATCATGCATGATATATTGTACTGAAACAAGACAA-TTTTCTACAAATA  49
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TTATCATGCATGATATATTGTACTGAAACAAGACAATTTTTCTACAAATA  50

seq1  GAAAATTTCATATACACTGAAGTGCACAGATAATATTGCTCACCTGCCTG  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATTTCATATACACTGAAGTGCACAGATAATATTGCTCACCTGCCTG  100

seq1  GTACTTACAAGTCCTTAGTTTTCCTCTTAGTATTAGGTCCTTTGTTCCAC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTACAAGTCCTTAGTTTTCCTCTTAGTATTAGGTCCTTTGTTCCAC  150

seq1  TAACTTTTTATGAATATATACACACACACACACACACACACACACACACA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTTTTATGAATATATACACACACACACACACACACACACACACACA  200

seq1  CACACGTGCATGCTCACATTTGTGTGTGTGTAACCTTCCTAGATTTTCAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACGTGCATGCTCACATTTGTGTGTGTGTAACCTTCCTAGATTTTCAT  250

seq1  CCTTTCAGATACACTTCATTTTCAATAAATGTAGATAGTAAAATAGAATT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCAGATACACTTCATTTTCAATAAATGTAGATAGTAAAATAGAATT  300

seq1  TCCCCATGTATCATTAGGCCTATGATCAATGATTTTAGTTGACAAGAAAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCATGTATCATTAGGCCTATGATCAATGATTTTAGTTGACAAGAAAT  350

seq1  TTGTTAACATATTTTGTCTATTTGTGATGAGAATGAATTCAGAATAGTTA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAACATATTTTGTCTATTTGTGATGAGAATGAATTCAGAATAGTTA  400

seq1  CAGTATTATAGAACATCTATTAAAGAATGCTATTTAATTTTTTATTAAAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTATTATAGAACATCTATTAAAGAATGCTATTTAATTTTTTATTAAAC  450

seq1  TATGTAACTACTAAAGATAGTTACATATCTTTCATTCCTATACTAAGGAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAACTACTAAAGATAGTTACATATCTTTCATTCCTATACTAAGGAA  500

seq1  TGAAATCTCCCTGTACATAAAGCCAAGTCAATGTCTCCTCACATTATTTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATCTCCCTGTACATAAAGCCAAGTCAATGTCTCCTCACATTATTTC  550

seq1  AGTTAGTAAGGTCAATAATCACCAGGGACCCTAGGAAAGTGAATTC  595
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGTAAGGTCAATAATCACCAGGGACCCTAGGAAAGTGAATTC  596