BAC Information

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BAC

Clone NameB6Ng01-101C15
Chromosome2 (Build37)X (Build37)
Map Location 86,655,562 - 86,655,747118,510,181 - 118,510,714
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneOlfr1018, Olfr1019, Olfr1020, Olfr1021-ps1, Olfr1022, Olfr1023, Olfr1024, Olfr1025-ps1, Olfr1026, Olfr1027-ps1, Olfr1028, Olfr1029, Olfr1030, Olfr1031, Olfr1032, LOC100042075, Olfr1033, Olfr1034, Olfr1533-ps1, Olfr1035-ps1, Olfr1036, Olfr1037, LOC100041372, Olfr1038, Olfr1039, Olfr1040, GA_x5J8B7W3KVV-170014-170572, Olfr1042, Olfr1043, Olfr1044, Olfr52, Olfr1045, Olfr1046, Olfr1047, Olfr1048, Olfr1049, Olfr1050-ps1, Olfr1051, GA_x5J8B7W3KVV-25848-25992, Olfr1052, Olfr1053-ps1, Olfr1054, Olfr1055, Olfr1056, Olfr1057, GA_x5J8B7TRQ4E-1174-939, Olfr1058, Olfr1059-ps1, Olfr1515, Olfr1062, Olfr1063-ps1, Olfr1064-ps1, Olfr1065, Olfr1066, Olfr1069-ps1, Olfr1070-ps1, Olfr228, Olfr1073-ps1, Olfr1075-ps1, GA_x5J8B7W4CQV-104617-103730, Olfr1076, LOC625853, Olfr1078-ps1, GA_x5J8B7W4CQV-78329-78805, Olfr1079, Olfr1080, Olfr1081-ps1, Olfr1082, GA_x5J8B7W4CQV-18360-18784, Olfr1083, Olfr1084, Olfr1085, Olfr1086, Olfr1087, Olfr1088-ps1, Olfr1089, Olfr1090, Olfr1091-ps1, GA_x5J8B7W3Y5M-123838-124302, Olfr1093, Olfr141
Downstream geneOlfr1094, Olfr1095, Olfr1096-ps1, Olfr1097, Olfr1098, Olfr1099, Olfr1100, Olfr1101, Olfr1102, Olfr1103-ps1, Olfr1104, Olfr1105, Olfr1106, Olfr1107, GA_x5J8B7W3Y5M-419033-418135, Olfr1109, Olfr259, LOC668402, Olfr1110, Olfr1111, Olfr1112, LOC228238, Olfr1113, Olfr1114-ps1, LOC546767, Olfr1115, Olfr1521-ps1, LOC100041923, Olfr1117-ps1, GA_x5J8B7TY7N2-4-429, LOC668424, Olfr1118, Olfr1119-ps1, Olfr1120, Olfr1121, Olfr1122, LOC668432, Olfr1123, Olfr1125, Olfr1126, Pramel7, Pramel6, LOC668439, Olfr1127-ps1, Olfr253-ps1, Olfr1128, LOC100042038, LOC668445, LOC668447, Olfr1129, Olfr1130, Olfr1131, Olfr1132, LOC100042076, Olfr1133, Olfr1134, Olfr1135, Olfr1136, Olfr1137, Olfr1138, GA_x5J8B7W3Y5M-1033291-1033773, Olfr1140, Olfr1141, Olfr152, Olfr1142-ps1, Olfr1143, GA_x5J8B7W3Y5M-1094074-1093275, Olfr1145
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101C15.bB6Ng01-101C15.g
ACCDH910440DH910441
length1,0031,006
definitionDH910440|Mus musculus domesticus DNA, BAC clone: B6Ng01-101C15, 5' end.DH910441|Mus musculus domesticus DNA, BAC clone: B6Ng01-101C15, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(86,655,562 - 86,655,747)(118,510,181 - 118,510,714)
sequence
gaattcttgattaagttctataccctattttttatttgtttgtttgtttg
tttttagtaattaccttcttgaattctttatatattttagatattagcca
tatatcagatgcagagttaatgaagtttttttccaatctgtaggttgcta
atttgtcttatcaactaagttcgttgccttatagaagctttccagtttct
gaggtcccatttatcaattgttgatcttagaacattgagccactggagtt
ctgtttaggaaatttccctcctgtgccaatgagttcaaggctctttccca
ctttctcttcttttagattcagttttatgttgaagtcttggttcacttgg
actttagctctgtataaagtaacaaatatggatctatttccattcttcta
catacagacagccagttagatcagcaccatttattgaagatgttttcttt
tagccattgtatatttttggtgtctttgtgaaagatcaagtgaccataag
tgtgtggttttatatctgggtcttcaacatgatcaacattgatcaatatg
tctgtctctttaccaataccattcagtttttatcactattgctgtgtagt
aaagcttgaggtcagggatggtgatatgcccagctcttcttttattgtca
agaattattttcgttattctggttttttgtttgtttgttttttgcctttc
cagatatatttgagaattgctcttttcacatgtttgaagaaatgtgttgg
gattttcatggggattgcattgatttatagattgcctttggtaggatagt
catttttactatgataaatctgccaacccatgagaatgggagagctctcc
attttctgacatcttctttgatttctttcttgagagacttcaacttattt
tcatacaggtcttacagttgttttgtataggtacccccaagatatttata
ttatttagggctatgtgaatggaatttttctgtatttcttctcagtctgt
tta
gaattcttataacaaaaaaaatgtagaatattttcccactatatatccac
tgaggaacagaaagagggagagggagaaagggactggggacattgtctga
ctttttaaggcctgccaccaatgacatacatcctataattagaaactacc
tccaaaaccattgaccagtataatacttgtaaagacactctaaaatacaa
tttattttaattcattttttatttttaaatgtgtgcaaaattttaatgtt
tgttgttttcaatttactttttgattgattgatttacattccagccatta
tccccctcagtctcctctcccacatttcctcatcccattattttcccccc
ttgcctctgagagggtgtttccccccaaacacaaggcctctcccatccct
ggggcctcaaataactcaaggattaaacacatcttctcccactaaggcct
gaccaggaagacttctgctatatttgtgccagtgacctttgactgacccc
tgtatgctcctggttggttgctcagtctctgggagctccctggggtctga
gttagttgaaactgctggtcttcctttggggttgatatcaccttcagctt
cttcaattcttcccctaatccaaccacaggtgcccccaacttcagttaaa
tggttaggtgtaagtatatgcttctgtctcattcaactgctgttatggcc
tctcaggggtcagccatgccaggctcctgtctgtaagcacatcatgtaat
agtgtcatggtttggtgccatcccatgaaatggatcccaaattgggacag
tattggaattcctttccttcagtctctactccatgtttatccctgtaaat
cttttaaatgttgggcagtggcgtcaaaattttgactgtgagtagtaatc
ctttctctcagctgaggacctttctatctactgaggcgactcttcgagtg
tctgtctccatgtggacatttggctagggtagcacacatgagtcctagag
attcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_86655562_86655747
seq2: B6Ng01-101C15.b_223_399 (reverse)

seq1  AGCTCAAGTCCAAGTGGATCAAGGACCTCAACATAAAACCAGATCCACTC  50
      |||| ||||||||||| | ||| ||| ||||||||||         ||| 
seq2  AGCTAAAGTCCAAGTGAACCAA-GACTTCAACATAAA---------ACTG  40

seq1  AATCTAATAGAAGAGAAAGTGGGAAAGAGCCTTGAACTCATTGGCA-AGA  99
      ||||||| |||||||||||||||||||||||||||||||||||||| || 
seq2  AATCTAAAAGAAGAGAAAGTGGGAAAGAGCCTTGAACTCATTGGCACAGG  90

seq1  GGGAAAATGTCTTAAACATAACTGTAGTGGTTC-ATGCTCTAAGATAAAT  148
       || |||| || |||||| ||||  ||||| || ||| |||||||| || 
seq2  AGGGAAATTTCCTAAACAGAACTCCAGTGGCTCAATGTTCTAAGATCAAC  140

seq1  AATTGATAAATGGGACCTCATGAAACTAGAAAGCTTCT  186
      |||||||||||||||||||| |||||| ||||||||||
seq2  AATTGATAAATGGGACCTCA-GAAACTGGAAAGCTTCT  177

seq1: chrX_118510181_118510714
seq2: B6Ng01-101C15.g_69_602 (reverse)

seq1  TCCCAGAGACTGAGCAACCAACCAGGAGCATACAGGGGTCAGTCAAAGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGAGACTGAGCAACCAACCAGGAGCATACAGGGGTCAGTCAAAGGT  50

seq1  CACTGGCACAAATATAGCAGAAGTCTTCCTGGTCAGGCCTTAGTGGGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGCACAAATATAGCAGAAGTCTTCCTGGTCAGGCCTTAGTGGGAGA  100

seq1  AGATGTGTTTAATCCTTGAGTTATTTGAGGCCCCAGGGATGGGAGAGGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTGTTTAATCCTTGAGTTATTTGAGGCCCCAGGGATGGGAGAGGCC  150

seq1  TTGTGTTTGGGGGGAAACACCCTCTCAGAGGCAAGGGGGGAAAATAATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTTTGGGGGGAAACACCCTCTCAGAGGCAAGGGGGGAAAATAATGG  200

seq1  GATGAGGAAATGTGGGAGAGGAGACTGAGGGGGATAATGGCTGGAATGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGGAAATGTGGGAGAGGAGACTGAGGGGGATAATGGCTGGAATGTA  250

seq1  AATCAATCAATCAAAAAGTAAATTGAAAACAACAAACATTAAAATTTTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAATCAATCAAAAAGTAAATTGAAAACAACAAACATTAAAATTTTGC  300

seq1  ACACATTTAAAAATAAAAAATGAATTAAAATAAATTGTATTTTAGAGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATTTAAAAATAAAAAATGAATTAAAATAAATTGTATTTTAGAGTGT  350

seq1  CTTTACAAGTATTATACTGGTCAATGGTTTTGGAGGTAGTTTCTAATTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACAAGTATTATACTGGTCAATGGTTTTGGAGGTAGTTTCTAATTAT  400

seq1  AGGATGTATGTCATTGGTGGCAGGCCTTAAAAAGTCAGACAATGTCCCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGTATGTCATTGGTGGCAGGCCTTAAAAAGTCAGACAATGTCCCCA  450

seq1  GTCCCTTTCTCCCTCTCCCTCTTTCTGTTCCTCAGTGGATATATAGTGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCTTTCTCCCTCTCCCTCTTTCTGTTCCTCAGTGGATATATAGTGGG  500

seq1  AAAATATTCTACATTTTTTTTGTTATAAGAATTC  534
      ||||||||||||||||||||||||||||||||||
seq2  AAAATATTCTACATTTTTTTTGTTATAAGAATTC  534