BAC Information

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BAC

Clone NameB6Ng01-101H05
Chromosome2 (Build37)
Map Location 87,494,491 - 87,573,077
singlet/doubletdoublet
Overlap geneOlfr1134, Olfr1135, Olfr1136, Olfr1137
Upstream geneOlfr1085, Olfr1086, Olfr1087, Olfr1088-ps1, Olfr1089, Olfr1090, Olfr1091-ps1, GA_x5J8B7W3Y5M-123838-124302, Olfr1093, Olfr141, Olfr1094, Olfr1095, Olfr1096-ps1, Olfr1097, Olfr1098, Olfr1099, Olfr1100, Olfr1101, Olfr1102, Olfr1103-ps1, Olfr1104, Olfr1105, Olfr1106, Olfr1107, GA_x5J8B7W3Y5M-419033-418135, Olfr1109, Olfr259, LOC668402, Olfr1110, Olfr1111, Olfr1112, LOC228238, Olfr1113, Olfr1114-ps1, LOC546767, Olfr1115, Olfr1521-ps1, LOC100041923, Olfr1117-ps1, GA_x5J8B7TY7N2-4-429, LOC668424, Olfr1118, Olfr1119-ps1, Olfr1120, Olfr1121, Olfr1122, LOC668432, Olfr1123, Olfr1125, Olfr1126, Pramel7, Pramel6, LOC668439, Olfr1127-ps1, Olfr253-ps1, Olfr1128, LOC100042038, LOC668445, LOC668447, Olfr1129, Olfr1130, Olfr1131, Olfr1132, LOC100042076, Olfr1133
Downstream geneOlfr1138, GA_x5J8B7W3Y5M-1033291-1033773, Olfr1140, Olfr1141, Olfr152, Olfr1142-ps1, Olfr1143, GA_x5J8B7W3Y5M-1094074-1093275, Olfr1145, Olfr1146-ps1, Olfr1147-ps1, Olfr1148, Olfr1149-ps1, Olfr1150-ps1, Olfr1151, Olfr1152, Olfr1153, Olfr1154, Olfr1155, Olfr1156, Olfr1157, Olfr74, Olfr1158, Olfr1159-ps1, Olfr1160, Olfr1161, Olfr73, Olfr1162, Olfr1163, Olfr1164, Olfr1165, Olfr1166, Olfr1167, Olfr1168, Olfr1169-ps1, Olfr1170, Olfr1171-ps1, Olfr1172-ps1, Olfr1173, Olfr1174, Olfr1175, Olfr1176, Olfr1177, Olfr1178, Olfr1179, Olfr1180, Olfr1181, Olfr1182, Olfr1183, Olfr1184, Olfr1185-ps1, Olfr1186, Olfr1187-ps1, Olfr1188, LOC668528, Olfr1189, GA_x5J8B7W4NS2-37772-38277, Olfr475-ps1, Olfr526-ps1, Olfr1192-ps1, Olfr1193, Olfr1194-ps1, Olfr1195, Olfr1196, Olfr1197
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101H05.bB6Ng01-101H05.g
ACCDH910631DH910632
length1,0581,154
definitionDH910631|Mus musculus domesticus DNA, BAC clone: B6Ng01-101H05, 5' end.DH910632|Mus musculus domesticus DNA, BAC clone: B6Ng01-101H05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(87,494,491 - 87,495,219)(87,571,888 - 87,573,077)
sequence
gaattcattctgtagaccaggctggtgtcaaacccagaaatcagcctgcc
tctgcctcccaagtgctgggattaaaggtgtgcaccaccatgcctggctc
ctttattgtttctatttcaatttttagatcttggatggtgttgttccaat
ccttcatctctttttgttctcctgtatttctttaagggagttatttatgt
ccttcttaaaatcctctatcatcatcatgggaagagctttcagttctgaa
tctttgctggtgtgatggtgtattcaggacttgctattttgggagaattg
gattatggtgatgtcaacttacctttgtttctgttgcttatgttcttatg
cttgcctcttgccatctggttattgctagtactacctgtgctcactatat
ctgactggagcctgtcctttctgtgatcctggctatatccagctgtctct
gtgatcctgtgattctgcaatcatgtgattttttgagatcctaggtgtat
cagttctcttgagagtaaagctgccttaatgggatctgagatcctggtaa
gacaatgctcctagattcttgtgatcctgtggtcctgtgatcctcggtgt
gttagggttcctggaagtggacccacctctgggtgttgtgagactagctg
cagagttcttctcaaggtctgctcaggcctctggctaaaagaggtggcct
cttgaggttccatgtcaccagtgttaagcatcttcctaaaataacatgca
cagaattctaggagccccacccatcccatgtctctgtaacttcctaaaaa
tgcaaacaaattatttttttatttttaattatgttggagggagacacaat
agtgcccctgattccaaaaagatagtgttgggatcacgtagagcctgagc
taattagagggtgagagaagtgtggtgtgtggatataaacttaactttga
aagaacataatgcattctttgcactgagcctctttgctgtcaactacaat
tatttaaggtatataatttctttaagtttatctgaaaattccctttttac
ttatatta
gaattctttgtttggctgtgtaccacatttttaatagggtattttggttt
tctggagtccaacatatatatatatataattttataatccttcaggaatt
tgatgttatttcttagaattgaaacttcagtagagttttagagttaaaaa
atttctcaaagatggagaatgatataagttatcaatatcactttcacaaa
ttggatccataaacaaatacatagtgcaataaaccctatcattttagttt
tatcattggagctttaaaaacataattaccttgaagtagtgtatttttat
acaagtacatacacaaacatgcacatacatacaatcattaatatacatat
aaatattttgagtgtataaaagcattcacacatatacatacactttcaga
cttattacatattagggaagtcgtaagttaaaaataacacagaatatttt
ggataaagatgagtgaactgtgtgttcatttccaaagaagaaaagaacac
acattggtatctgtcattcaaatatttaattttcaatttaaactaatctg
tttcccctaacaattggaacactggttgtgcttttaagcaaatttcgata
atgtttatacctattagaaaataggctagtcattttcattttagcggtat
gggactccatggtccatagctctgtgtttaaattttctctgtctgaaata
gttcaaaattgaggaaatgtctgtcctttcaagtttaagtgtggtattaa
tacagcaactttttgttaatatgacagtgtaagtggcaagaataacgtca
gaacgaataaattattttgcttaccatattatatttttttctattaagca
gaattaaaaccataagcaagttttcatggctggtaagtagcagtggggag
gccagctaagttgcaaacagaaatttatgttaaagatattcccagtcatc
attttctgtgaccaaggccgacatcctagagcttaaatgttccacacagt
ctattcactgaaggatgatctatcaatagatttaacagttgaaatctcca
tgaacggtactctagagttacaccacccattctacgattgtgctgcctaa
tctgcattcctaatgatggatcaatcactcaagtcagagtcttttttccc
aagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_87494491_87495219
seq2: B6Ng01-101H05.b_379_1103

seq1  TTGCTTATGTTCTTATGCTTGCCTCTTGCCATCTGGTTATTGCTAGTACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTATGTTCTTATGCTTGCCTCTTGCCATCTGGTTATTGCTAGTACT  50

seq1  ACCTGTGCTCACTATATCTGACTGGAGCCTGTCCTTTCTGTGATCCTGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTGCTCACTATATCTGACTGGAGCCTGTCCTTTCTGTGATCCTGGC  100

seq1  TATATCCAGCTGTCTCTGTGATCCTGTGATTCTGCAATCATGTGATTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCCAGCTGTCTCTGTGATCCTGTGATTCTGCAATCATGTGATTTTT  150

seq1  TGAGATCCTAGGTGTATCAGTTCTCTTGAGAGTAAAGCTGCCTTAATGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATCCTAGGTGTATCAGTTCTCTTGAGAGTAAAGCTGCCTTAATGGG  200

seq1  ATCTGAGATCCTGGTAAGACAATGCTCCTAGATTCTTGTGATCCTGTGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAGATCCTGGTAAGACAATGCTCCTAGATTCTTGTGATCCTGTGGT  250

seq1  CCTGTGATCCTCGGTGTGTTAGGGTTCCTGGAAGTGGACCCACCTCTGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGATCCTCGGTGTGTTAGGGTTCCTGGAAGTGGACCCACCTCTGGG  300

seq1  TGTTGTGAGACTAGCTGCAGAGTTCTTCTCAAGGTCTGCTCAGGCCTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTGAGACTAGCTGCAGAGTTCTTCTCAAGGTCTGCTCAGGCCTCTG  350

seq1  GCTAAAAGAGGTGGCCTCTTGAGGTTCCATGTCACCAGTGTTAAGCATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAAAGAGGTGGCCTCTTGAGGTTCCATGTCACCAGTGTTAAGCATCT  400

seq1  TCCTAAAATAACATGCACAGAATTCTAGGAGCCCCACCCATCCCATGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAAAATAACATGCACAGAATTCTAGGAGCCCCACCCATCCCATGTCT  450

seq1  CTGTAACTTCCTAAAAATGCAAACAAATTATTTTTTTATTTTTAATTATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAACTTCCTAAAAATGCAAACAAATTATTTTTTTATTTTTAATTATG  500

seq1  TTGGAGGGAGACAACAATAGTGCCCCTGATTCC-AAAAGATAGTGTT-GG  548
      |||||||||||| |||||||||||||||||||| ||||||||||||| ||
seq2  TTGGAGGGAGAC-ACAATAGTGCCCCTGATTCCAAAAAGATAGTGTTGGG  549

seq1  ATCACGTAGAGCCTGAGCTAAATTAGAGGGTGAGAGACGTGATGTGTGT-  597
      ||||||||||||||||||| ||||||||||||||||| |||  |||||| 
seq2  ATCACGTAGAGCCTGAGCT-AATTAGAGGGTGAGAGAAGTGTGGTGTGTG  598

seq1  GATATAAACTTAAC-TTGAAAGAACATAATGCATTCTTATGCACTGAGCC  646
      |||||||||||||| ||||||||||||||||||||||| |||||||||||
seq2  GATATAAACTTAACTTTGAAAGAACATAATGCATTCTT-TGCACTGAGCC  647

seq1  ATCTTGCTTGTCAACTACAATATATTTTAGGTATTATAATTTTCTTTTAA  696
       ||||   ||||||||||||| ||||| ||||| ||||||||   |||||
seq2  -TCTTTGCTGTCAACTACAAT-TATTTAAGGTA-TATAATTT--CTTTAA  692

seq1  GTTTATCTGAGAATTCACTATTTTACTT-TATTA  729
      |||||||||| ||||| || |||||||| |||||
seq2  GTTTATCTGAAAATTCCCT-TTTTACTTATATTA  725

seq1: chr2_87571888_87573077
seq2: B6Ng01-101H05.g_68_1221 (reverse)

seq1  CCTTGGAGAAAAAAAAAAGACTCATAGGACTGTTGAGTTTGATTGAAACC  50
      ||||||      |||||||||||    |||  |||||  |||||| | ||
seq2  CCTTGG-----GAAAAAAGACTC---TGAC--TTGAG--TGATTG-ATCC  37

seq1  ATTAAAATTGAGGAATGCCTAGGATATTAGCAAGCACAATTTGGTTAGAA  100
      || |    | ||||||||     | |||||  ||||||||     |||||
seq2  ATCA----TTAGGAATGC-----AGATTAGGCAGCACAAT---CGTAGAA  75

seq1  TGGGTGGTGTTACATCTAGAGTACACAGTTCATGGAGATTTTCCAACTGT  150
      |||||||||| || ||||||||  || ||||||||||||||  |||||||
seq2  TGGGTGGTGTAAC-TCTAGAGT--ACCGTTCATGGAGATTT--CAACTGT  120

seq1  TAAATCTATTGATAGATTCATCCTTCAGTGAATAGACTGTGTGGAACATT  200
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TAAATCTATTGATAGA-TCATCCTTCAGTGAATAGACTGTGTGGAACATT  169

seq1  TAAGCCTTCTAGGATGTCGGCCTTGGTCCACAGAAATTGATGACTGGGAA  250
      |||||  |||||||||||||||||||| |||||||| |||||||||||||
seq2  TAAGC--TCTAGGATGTCGGCCTTGGT-CACAGAAAATGATGACTGGGAA  216

seq1  TTATCTTTAACATAAATTTCTTGTTTTGCCACTTAGCTGGCCT-CCCACT  299
       ||||||||||||||||||||   ||||| ||||||||||||| ||||||
seq2  -TATCTTTAACATAAATTTCT--GTTTGCAACTTAGCTGGCCTCCCCACT  263

seq1  GCTACTTACCAGCCATGAAAACTTGCCTTATGGTTTTAATTCTGCTTAAT  349
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GCTACTTACCAGCCATGAAAACTTG-CTTATGGTTTTAATTCTGCTTAAT  312

seq1  AGAAAAAAATATAATATGGTAAGCAAAATAATTTATTCGTTCTGACGTTA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAAATATAATATGGTAAGCAAAATAATTTATTCGTTCTGACGTTA  362

seq1  TTCTTGCCACTTACACTGTCATATTAAC-AAAAGTTGCTGTATTAATACC  448
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TTCTTGCCACTTACACTGTCATATTAACAAAAAGTTGCTGTATTAATACC  412

seq1  ACACTTAAACTTGAAAGGACAGACATTTCCTCAATTTTGAACTATTTCAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTAAACTTGAAAGGACAGACATTTCCTCAATTTTGAACTATTTCAG  462

seq1  ACAGAGAAAATTTAAACACAGAGCTATGGACCATGGAGTCCCATACCGCT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGAAAATTTAAACACAGAGCTATGGACCATGGAGTCCCATACCGCT  512

seq1  AAAATGAAAATGACTAGCCTATTTTCTAATAGGTATAAACATTATCGAAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGAAAATGACTAGCCTATTTTCTAATAGGTATAAACATTATCGAAA  562

seq1  TTTGCTTAAAAGCACAACCAGTGTTCCAATTGTTAGGGGAAACAGATTAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTAAAAGCACAACCAGTGTTCCAATTGTTAGGGGAAACAGATTAG  612

seq1  TTTAAATTGAAAATTAAATATTTGAATGACAGATACCAATGTGTGTTCTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATTGAAAATTAAATATTTGAATGACAGATACCAATGTGTGTTCTT  662

seq1  TTCTTCTTTGGAAATGAACACACAGTTCACTCATCTTTATCCAAAATATT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTTTGGAAATGAACACACAGTTCACTCATCTTTATCCAAAATATT  712

seq1  CTGTGTTATTTTTAACTTACGACTTCCCTAATATGTAATAAGTCTGAAAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTTATTTTTAACTTACGACTTCCCTAATATGTAATAAGTCTGAAAG  762

seq1  TGTATGTATATGTGTGAATGCTTTTATACACTCAAAATATTTATATGTAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGTATATGTGTGAATGCTTTTATACACTCAAAATATTTATATGTAT  812

seq1  ATTAATGATTGTATGTATGTGCATGTTTGTGTATGTACTTGTATAAAAAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATGATTGTATGTATGTGCATGTTTGTGTATGTACTTGTATAAAAAT  862

seq1  ACACTACTTCAAGGTAATTATGTTTTTAAAGCTCCAATGATAAAACTAAA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTACTTCAAGGTAATTATGTTTTTAAAGCTCCAATGATAAAACTAAA  912

seq1  ATGATAGGGTTTATTGCACTATGTATTTGTTTATGGATCCAATTTGTGAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATAGGGTTTATTGCACTATGTATTTGTTTATGGATCCAATTTGTGAA  962

seq1  AGTGATATTGATAACTTATATCATTCTCCATCTTTGAGAAATTTTTTAAC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATATTGATAACTTATATCATTCTCCATCTTTGAGAAATTTTTTAAC  1012

seq1  TCTAAAACTCTACTGAAGTTTCAATTCTAAGAAATAACATCAAATTCCTG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAACTCTACTGAAGTTTCAATTCTAAGAAATAACATCAAATTCCTG  1062

seq1  AAGGATTATAAAATTATATATATATATATGTTGGACTCCAGAAAACCAAA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATTATAAAATTATATATATATATATGTTGGACTCCAGAAAACCAAA  1112

seq1  ATACCCTATTAAAAATGTGGTACACAGCCAAACAAAGAATTC  1190
      ||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCCTATTAAAAATGTGGTACACAGCCAAACAAAGAATTC  1154