BAC Information

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BAC

Clone NameB6Ng01-103F01
Chromosome2 (Build37)
Map Location 127,163,644 - 127,164,671
singlet/doubletsinglet
Overlap geneDusp2, Astl
Upstream geneAtp8b4, Slc27a2, Hdc, Gabpb1, Usp8, LOC100043714, Usp50, Trpm7, 2010106G01Rik, Ap4e1, Blvra, Ncaph, 1700041B20Rik, 1810024B03Rik, LOC100043408, Ascc3l1, Ciao1, Tmem127, ENSMUSG00000074822, Stard7
Downstream geneAdra2b, A530057A03Rik, Fahd2a, Kcnip3, Prom2, Zfp661, Mrps5, Mal, LOC668892, Mall, Nphp1, 1500011K16Rik, Bub1, Acoxl, Bcl2l11, LOC100043424
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-103F01.bB6Ng01-103F01.g
ACCDH911943DH911944
length1,0311,091
definitionDH911943|Mus musculus domesticus DNA, BAC clone: B6Ng01-103F01, 5' end.DH911944|Mus musculus domesticus DNA, BAC clone: B6Ng01-103F01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaccatgttccagtgaatatatggacaaaacaaaatggacttac
cttttccttttgggggggcagaacatcctggggaggggagggagcagatg
tgggaaaactgggaggtgagcacaatcagggtgcttgatgtgagatttcc
aaataattcattaaaaaaaaaaaactgatacaattcctgaggaaggctca
gaacaaccctagctcttgagtgctttacccagagcagagaaaatgggcgc
caggggtaggttatgcacccttcatccagggagccagtgccctctgatct
aaatgccctcagtcaacacatacctgcacaccacacactaggtaaatgtg
gggtctgatcagggatgcacagagccgctgtgaggctgaggccgacctcg
gccttcctaaccctcccagttcaaccacaggctagaacctgtatgggaaa
gagcccagcccaggccagcccaggccagcccaggccagcccaggccagcc
caggccaaggcagaccactcagccatcgcaggcacagacttgagaccaga
caatgtggtactgctcttttttaaacaaaacactgtttttattgacacaa
cctcaatgttctatataaatataaagtgctgtttccaacgcccctccctg
gcccacagggccgggaggaagttggggagagagcgttaaatgtcagttga
acacaaataacttttcagcaccaatttacagcgagatgcccacacacaca
cacacaaaagtcagatgtccgtaacatgacacacacgtcacttcctggct
cccctgggagcacaaggcttaagctttgggtcaagggctgcacaccccta
gacatggtttctgcttgtcacaaccttgttttctgagccctgggtgacca
agggctttaatatagtaaattaattaattaaattaatttctgcaagtcga
aaggagggagagcaaaatatggccaagccttatgcacctcagaagagcac
caatatcagagcagccgtcatcctgggattt
gaattctgttcatgtggctatcttcttttaggtttgttgaaagattactt
tcttgctttttctagagcatagttttcctccttgtgttggagttttccct
ttattatcctttgaagggcttgatttgtggaaagatattgtgtaaatttg
gttttgtcatggaatatcttggtttctccatctatggtaactgagagttt
tgctggatataatagtctgggctggcatttgtgttctcttagggtctgta
tgacatctgcccaggatcttctggcttttatagtttctggggagaagtca
ggtataattctgataggtctgcctttatatgttacttgacctttttccct
tactgagtttaatattctttctttgttttgtgcatttggtgttttgatta
ttatgtgacagaagacatttcttttctggtccaaactatttggagttcta
taaacttcttgtatgtctataggcatctctttctttaagttttcttctat
aatgttgttgaagatatttactgaccctttaagttggaaatctttcttct
tgtctatacctattatccttacgtttggtcttctcactgtgtcctggatt
tcctcgatgttttgggttaggatcctttccacttctcattttctttgact
gttgtgtcagtgttctctatggtatcttctgcacctgagatcctctcttc
tatttcttgtattctgttggtgatgcttgcatctatggttcctgactttc
ttcctaggttttctatctctagagttgtctccctttgtgatttctctttt
gtctctacttccattttagatcctgaatggttttgttcactctttcacct
gtttggataatatttttcttataatttctttaaagggattttttggtttt
ccttttaagggcttctacctgtttacctgtgttttcctctatttcttaag
tgagttatttatgtctttctattagtttccatcatcatcatggaggaggt
gatttagatccatatcttggcttttcgggtggatgggattcaggactggc
tatgggggggagagtttgggttctgatatagccaagaactg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_127163644_127164671
seq2: B6Ng01-103F01.b_44_1074 (reverse)

seq1  AAAT-CCAGGATGACGGCTGCTCTGATA-TGGTGCTCTTCTGAGGTGGCA  48
      |||| ||||||||||||||||||||||| ||||||||||||||||| |||
seq2  AAATCCCAGGATGACGGCTGCTCTGATATTGGTGCTCTTCTGAGGT-GCA  49

seq1  TAAGGGCTGGCCCTTATTTGCTCTCCCTCC-TTCGACTTGCAGAAATTAA  97
      |||||  ||||| |  |||||||||||||| |||||||||||||||||||
seq2  TAAGGCTTGGCCATATTTTGCTCTCCCTCCTTTCGACTTGCAGAAATTAA  99

seq1  TTTAATTAATTAATTTACTATATTAAAGCCCTTGGTCACCCAAGGGCTCA  147
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TTTAATTAATTAATTTACTATATTAAAGCCCTTGGTCACCC-AGGGCTCA  148

seq1  GAAAACAA-GCTGTGACAAGCAGAAACCATGTCTAGGGGTGTGCAGCCCT  196
      |||||||| | |||||||||||||||||||||||||||||||||||||||
seq2  GAAAACAAGGTTGTGACAAGCAGAAACCATGTCTAGGGGTGTGCAGCCCT  198

seq1  TGACCCAAAGCTTAAGCCTTGTGCTCCCAGGGGAGCCAGGAAGTGACGTG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCCAAAGCTTAAGCCTTGTGCTCCCAGGGGAGCCAGGAAGTGACGTG  248

seq1  TGTGTCATGTTACGGACATCTGACTTTTGTGTGTGTGTGTGTGGGCATCT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCATGTTACGGACATCTGACTTTTGTGTGTGTGTGTGTGGGCATCT  298

seq1  CGCTGT-AATTGGTGCTGAAAAGTTATTTGTGTTCAACTGACATTTAACG  345
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTGTAAATTGGTGCTGAAAAGTTATTTGTGTTCAACTGACATTTAACG  348

seq1  CTCTCTCCCCAACTTCCTCCCGGCCCTGTGGGCCAGGGAGGGGCGTTGGA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCCCCAACTTCCTCCCGGCCCTGTGGGCCAGGGAGGGGCGTTGGA  398

seq1  AACAGCACTTTATATTTATATAGAACATTGAGGTTGTGTCAATAAAAACA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCACTTTATATTTATATAGAACATTGAGGTTGTGTCAATAAAAACA  448

seq1  GTGTTTTGTTTAAAAAAGAGCAGTACCACATTGTCTGGTCTCAAGTCTGT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTTGTTTAAAAAAGAGCAGTACCACATTGTCTGGTCTCAAGTCTGT  498

seq1  GCCTGCGATGGCTGAGTGGTCTGCCTTGGCCTGGGCTGGCCTGGGCTGGC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCGATGGCTGAGTGGTCTGCCTTGGCCTGGGCTGGCCTGGGCTGGC  548

seq1  CTGGGCTGGCCTGGGCTGGCCTGGGCTGGGCTCTTTCCCATACAGGTTCT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCTGGCCTGGGCTGGCCTGGGCTGGGCTCTTTCCCATACAGGTTCT  598

seq1  AGCCTGTGGTTGAACTGGGAGGGTTAGGAAGGCCGAGGTCGGCCTCAGCC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGTGGTTGAACTGGGAGGGTTAGGAAGGCCGAGGTCGGCCTCAGCC  648

seq1  TCACAGCGGCTCTGTGCATCCCTGATCAGACCCCACATTTACCTAGTGTG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGCGGCTCTGTGCATCCCTGATCAGACCCCACATTTACCTAGTGTG  698

seq1  TGGTGTGCAGGTATGTGTTGACTGAGGGCATTTAGATCAGAGGGCACTGG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTGCAGGTATGTGTTGACTGAGGGCATTTAGATCAGAGGGCACTGG  748

seq1  CTCCCTGGATGAAGGGTGCATAACCTACCCCTGGCGCCCATTTTCTCTGC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTGGATGAAGGGTGCATAACCTACCCCTGGCGCCCATTTTCTCTGC  798

seq1  TCTGGGTAAAGCACTCAAGAGCTAGGGTTGTTCTGAGCCTTCCTCAGGAA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGTAAAGCACTCAAGAGCTAGGGTTGTTCTGAGCCTTCCTCAGGAA  848

seq1  TTGTATCAGTTTTTTTTTTTTAATGAATTATTTGGAAATCTCACATCAAG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATCAGTTTTTTTTTTTTAATGAATTATTTGGAAATCTCACATCAAG  898

seq1  CACCCTGATTGTGCTCACCTCCCAGTTTTCCCACATCTGCTCCCTCCCCT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTGATTGTGCTCACCTCCCAGTTTTCCCACATCTGCTCCCTCCCCT  948

seq1  CCCCAGGATGTTCTGCCCCCCCAAAAGGAAAAGGTAAGTCCATTTTGTTT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGGATGTTCTGCCCCCCCAAAAGGAAAAGGTAAGTCCATTTTGTTT  998

seq1  TGTCCATATATTCACTGGAACATGGTTGAATTC  1028
      |||||||||||||||||||||||||||||||||
seq2  TGTCCATATATTCACTGGAACATGGTTGAATTC  1031