BAC Information

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BAC

Clone NameB6Ng01-104A14
Chromosome2 (Build37)
Map Location 32,673,491 - 32,821,305
singlet/doubletdoublet
Overlap geneStxbp1, 9130404D14Rik, Lrsam1, Snora65
Upstream geneFibcd1, Lamc3, 2810003C17Rik, Nup214, A130092J06Rik, LOC100040058, Ppapdc3, 5830434P21Rik, Pomt1, Uck1, LOC622534, 2900010J23Rik, Golga2, Dnm1, Ciz1, 1110008P14Rik, Lcn2, Ptges2, LOC100041671, Slc25a25, 4933440H19Rik, C230093N12Rik, Dpm2, Pip5kl1, St6galnac4, St6galnac6, Ak1, Eng, Fpgs, Cdk9, Sh2d3c, Tor2a, Ttc16, Ptrh1, 1700019L03Rik
Downstream geneSlc2a8, Garnl3, Ralgps1, Angptl2, Zbtb34, Zbtb43, LOC676764, Lmx1b, LOC100041918, 2610528K11Rik, LOC100041931
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-104A14.bB6Ng01-104A14.g
ACCDH912449DH912450
length1,145243
definitionDH912449|Mus musculus domesticus DNA, BAC clone: B6Ng01-104A14, 5' end.DH912450|Mus musculus domesticus DNA, BAC clone: B6Ng01-104A14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,673,491 - 32,674,642)(32,821,063 - 32,821,305)
sequence
gaattctgaatggccttgtaatggagcacccggaaactgtgctcagcagg
aagccctctgctcccagaggagcctggtgggctagctttcatcagaaaga
caacaactgctactacttctccttctctttctgatagtgttatacatttg
tgcatgtgtgtgtatacactcaacgtgtgtgtgtatgtgtgtgtgtgtac
acttgtgcacgagtgaatatatgcttgtgcgtatgtgtgtgtatacactc
acatgtatgttgtatacctgtgcatgtgtgtgagtatacacttgtgcatg
tgtgtgtgtgtcttacagtgttcatctgctgaagagagaagattaagtaa
ctgtagtaccgctcatttcttctgctgtcctgccccagctcagcctccat
ggaactgtgaagaaatgccaacctgggccagcaggagcagcccatggggt
acttacagtctgtgaagaacacatgcgcagcccgatatttagcagtcggc
gggtccttaaaatcactgatcagagagtggacagactgtaaatagggggg
aagggggacattaaattcaattttagaagccagtgcaacctaaatctgac
taaatccactggttttgggctgcttgtactacaacaatggtttccagtgt
gtgtctctagtacttctggtgtttagtcacaaccagctctgagcacttaa
aggtaagattactccagaatgtggttcactccagaatggcagtgtcagtg
ccactggaacctggactcacaaaactgttcagaaccttcgagaagattca
tagggatgttctggcagaaacttacctgaagaccagattttgaaagtgaa
ggcaatatgtgaagaccaggggattttaaaaataataaataaataagccc
ttggggtttctattgctgagctaaacactgtgaccaaagcaacttggaaa
gggaacggcctacgtcagctcacagtcctatatcactgtctattgctgag
ggaaggcagggcagacacctgagcagagcttaggcagatgctacagagga
gcactgctgactgtcttgctcttctcgctcagcttattttggaagccata
ctacccaggaaccactttgggcctaggatggctggcacactgggc
tctggaaatgaagttacaggtcaggtgaatgtaagccaccctatgtgggt
actgggaattaaacctgggccctctacacgagaaacaaaacagccaaata
ttgtttgaagccaaaaagagaagtggactcaatgaggtaagtctgaggtt
agtgccttgttccactgtgcagctgttatttctacttgagttaaccttat
gctgttttagttaagtgaccttttttctggggggggggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_32673491_32674642
seq2: B6Ng01-104A14.b_43_1187

seq1  GAATTCTGAATGGCCTTGTAATGGAGCACCCGGAAACTGTGCTCAGCAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAATGGCCTTGTAATGGAGCACCCGGAAACTGTGCTCAGCAGG  50

seq1  AAGCCCTCTGCTCCCAGAGGAGCCTGGTGGGCTAGCTTTCATCAGAAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCTCTGCTCCCAGAGGAGCCTGGTGGGCTAGCTTTCATCAGAAAGA  100

seq1  CAACAACTGCTACTACTTCTCCTTCTCTTTCTGATAGTGTTATACATTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAACTGCTACTACTTCTCCTTCTCTTTCTGATAGTGTTATACATTTG  150

seq1  TGCATGTGTGTGTATACACTCAACGTGTGTGTGTATGTGTGTGTGTGTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGTGTGTGTATACACTCAACGTGTGTGTGTATGTGTGTGTGTGTAC  200

seq1  ACTTGTGCACGAGTGAATATATGCTTGTGCGTATGTGTGTGTATACACTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTGCACGAGTGAATATATGCTTGTGCGTATGTGTGTGTATACACTC  250

seq1  ACATGTATGTTGTATACCTGTGCATGTGTGTGAGTATACACTTGTGCATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTATGTTGTATACCTGTGCATGTGTGTGAGTATACACTTGTGCATG  300

seq1  TGTGTGTGTGTCTTACAGTGTTCATCTGCTGAAGAGAGAAGATTAAGTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTCTTACAGTGTTCATCTGCTGAAGAGAGAAGATTAAGTAA  350

seq1  CTGTAGTACCGCTCATTTCTTCTGCTGTCCTGCCCCAGCTCAGCCTCCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGTACCGCTCATTTCTTCTGCTGTCCTGCCCCAGCTCAGCCTCCAT  400

seq1  GGAACTGTGAAGAAATGCCAACCTGGGCCAGCAGGAGCAGCCCATGGGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTGTGAAGAAATGCCAACCTGGGCCAGCAGGAGCAGCCCATGGGGT  450

seq1  ACTTACAGTCTGTGAAGAACACATGCGCAGCCCGATATTTAGCAGTCGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTACAGTCTGTGAAGAACACATGCGCAGCCCGATATTTAGCAGTCGGC  500

seq1  GGGTCCTTAAAATCACTGATCAGAGAGTGGACAGACTGTAAATAGGGGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCCTTAAAATCACTGATCAGAGAGTGGACAGACTGTAAATAGGGGGG  550

seq1  AAGGGGGACATTAAATTCAATTTTAGAAGCCAGTGCAACCTAAATCTGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGGGACATTAAATTCAATTTTAGAAGCCAGTGCAACCTAAATCTGAC  600

seq1  TAAATCCACTGGTTTTGGGCTGCTTGTACTACAACAATGGTTTCCAGTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCCACTGGTTTTGGGCTGCTTGTACTACAACAATGGTTTCCAGTGT  650

seq1  GTGTCTCTAGTACTTCTGGTGTTTAGTCACAACCAGCTCTGAGCACTTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTCTAGTACTTCTGGTGTTTAGTCACAACCAGCTCTGAGCACTTAA  700

seq1  AGGTAAGATTACTCCAGAATGTGGTTCACTCCAGAATGGCAGTGTCAGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAAGATTACTCCAGAATGTGGTTCACTCCAGAATGGCAGTGTCAGTG  750

seq1  CCACTGGAACCTGGACTCACAAAACTGTTCAGAACCTTCGAGAAGATTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGGAACCTGGACTCACAAAACTGTTCAGAACCTTCGAGAAGATTCA  800

seq1  TAGGGATGTTCTGGCAGAAACTTACCTGAAGACCAGATTTTGAAAGTGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGATGTTCTGGCAGAAACTTACCTGAAGACCAGATTTTGAAAGTGAA  850

seq1  GGCAATATGTGAAGACCAGGGGATTTTAAAAATAAATAAATAAATAAGCC  900
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GGCAATATGTGAAGACCAGGGGATTTTAAAAAT-AATAAATAAATAAGCC  899

seq1  CTTGGGGTTTCTATTGCTGAGCTAAACACTGTGACCAAAAGCAACTTGGA  950
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CTTGGGGTTTCTATTGCTGAGCTAAACACTGTGACC-AAAGCAACTTGGA  948

seq1  AAGGGAAGGGCCTACGTCAGCTCACAGTCCTATATCACTGTCTATTGCTG  1000
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAACGGCCTACGTCAGCTCACAGTCCTATATCACTGTCTATTGCTG  998

seq1  AGGGAAGGCAGGGCAGACACCTGAGGCAGGAGCTTAGGCAGATGCTACAG  1050
      |||||||||||||||||||||||| ||| |||||||||||||||||||||
seq2  AGGGAAGGCAGGGCAGACACCTGA-GCA-GAGCTTAGGCAGATGCTACAG  1046

seq1  AGGAGCACTGCTGACTGTCTTGCTC-TCTCGCTCAGCTTATTTTTGAAAG  1099
      ||||||||||||||||||||||||| |||||||||||||| ||||| |||
seq2  AGGAGCACTGCTGACTGTCTTGCTCTTCTCGCTCAGCTTA-TTTTGGAAG  1095

seq1  CACATACTACCCAGG-ACCAC-TTGGGCCTAGGAGTGGCACTGGCCACAC  1147
      | ||||||||||||| ||||| |||||||||||| |||  |||| |||||
seq2  C-CATACTACCCAGGAACCACTTTGGGCCTAGGA-TGG--CTGG-CACAC  1140

seq1  TGGGC  1152
      |||||
seq2  TGGGC  1145

seq1: chr2_32821063_32821305
seq2: B6Ng01-104A14.g_72_314 (reverse)

seq1  CCCCCCCCCCCCCCCAGAAAAAAGGTCACTTAACTAAAACAGCATAAGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCCCCCCCAGAAAAAAGGTCACTTAACTAAAACAGCATAAGGT  50

seq1  TAACTCAAGTAGAAATAACAGCTGCACAGTGGAACAAGGCACTAACCTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTCAAGTAGAAATAACAGCTGCACAGTGGAACAAGGCACTAACCTCA  100

seq1  GACTTACCTCATTGAGTCCACTTCTCTTTTTGGCTTCAAACAATATTTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTACCTCATTGAGTCCACTTCTCTTTTTGGCTTCAAACAATATTTGG  150

seq1  CTGTTTTGTTTCTCGTGTAGAGGGCCCAGGTTTAATTCCCAGTACCCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTGTTTCTCGTGTAGAGGGCCCAGGTTTAATTCCCAGTACCCACA  200

seq1  TAGGGTGGCTTACATTCACCTGACCTGTAACTTCATTTCCAGA  243
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGTGGCTTACATTCACCTGACCTGTAACTTCATTTCCAGA  243