BAC Information

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BAC

Clone NameB6Ng01-104E13
Chromosome2 (Build37)
Map Location 87,145,674 - 87,338,321
singlet/doubletdoublet
Overlap geneOlfr1118, Olfr1119-ps1, Olfr1120, Olfr1121, Olfr1122, LOC668432, Olfr1123, Olfr1125, Olfr1126, Pramel7
Upstream geneOlfr1053-ps1, Olfr1054, Olfr1055, Olfr1056, Olfr1057, GA_x5J8B7TRQ4E-1174-939, Olfr1058, Olfr1059-ps1, Olfr1515, Olfr1062, Olfr1063-ps1, Olfr1064-ps1, Olfr1065, Olfr1066, Olfr1069-ps1, Olfr1070-ps1, Olfr228, Olfr1073-ps1, Olfr1075-ps1, GA_x5J8B7W4CQV-104617-103730, Olfr1076, LOC625853, Olfr1078-ps1, GA_x5J8B7W4CQV-78329-78805, Olfr1079, Olfr1080, Olfr1081-ps1, Olfr1082, GA_x5J8B7W4CQV-18360-18784, Olfr1083, Olfr1084, Olfr1085, Olfr1086, Olfr1087, Olfr1088-ps1, Olfr1089, Olfr1090, Olfr1091-ps1, GA_x5J8B7W3Y5M-123838-124302, Olfr1093, Olfr141, Olfr1094, Olfr1095, Olfr1096-ps1, Olfr1097, Olfr1098, Olfr1099, Olfr1100, Olfr1101, Olfr1102, Olfr1103-ps1, Olfr1104, Olfr1105, Olfr1106, Olfr1107, GA_x5J8B7W3Y5M-419033-418135, Olfr1109, Olfr259, LOC668402, Olfr1110, Olfr1111, Olfr1112, LOC228238, Olfr1113, Olfr1114-ps1, LOC546767, Olfr1115, Olfr1521-ps1, LOC100041923, Olfr1117-ps1, GA_x5J8B7TY7N2-4-429, LOC668424
Downstream genePramel6, LOC668439, Olfr1127-ps1, Olfr253-ps1, Olfr1128, LOC100042038, LOC668445, LOC668447, Olfr1129, Olfr1130, Olfr1131, Olfr1132, LOC100042076, Olfr1133, Olfr1134, Olfr1135, Olfr1136, Olfr1137, Olfr1138, GA_x5J8B7W3Y5M-1033291-1033773, Olfr1140, Olfr1141, Olfr152, Olfr1142-ps1, Olfr1143, GA_x5J8B7W3Y5M-1094074-1093275, Olfr1145, Olfr1146-ps1, Olfr1147-ps1, Olfr1148, Olfr1149-ps1, Olfr1150-ps1, Olfr1151, Olfr1152, Olfr1153, Olfr1154, Olfr1155, Olfr1156, Olfr1157, Olfr74, Olfr1158, Olfr1159-ps1, Olfr1160, Olfr1161, Olfr73, Olfr1162, Olfr1163, Olfr1164, Olfr1165, Olfr1166, Olfr1167, Olfr1168, Olfr1169-ps1, Olfr1170, Olfr1171-ps1, Olfr1172-ps1, Olfr1173, Olfr1174, Olfr1175, Olfr1176, Olfr1177, Olfr1178, Olfr1179, Olfr1180, Olfr1181, Olfr1182, Olfr1183, Olfr1184
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-104E13.bB6Ng01-104E13.g
ACCDH912631DH912632
length798620
definitionDH912631|Mus musculus domesticus DNA, BAC clone: B6Ng01-104E13, 5' end.DH912632|Mus musculus domesticus DNA, BAC clone: B6Ng01-104E13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(87,145,674 - 87,146,473)(87,337,702 - 87,338,321)
sequence
gaattcactctgtagaccaggctggccttaaatcggaaattcgacttcct
ctacctcccaaatgctgggattaaaggcatgtaccaccatgcctggccaa
agaaagtaaatttcttatttgtatctttattttgagtttctcactaaact
ctaaaatgtcttacaaaaaaaagtatcaaagacattcaaagaatgataca
ggactggagaaataaagtttctggttttgaaaaaatacagaaaaactggt
tttcttgcagcaaaggcaagaattttgctggagaatgttaattctctcca
aacatgttgaatttatatctgaaagttttaaaaccaccaataccagctct
atcatattctatctgaaaccattaattttactttacagttcacaggacga
atgcacaaatatcaattgacctgtcatgtgtggcccacacagattataaa
atgatatatatgctattaattggctttcaaaaatcatatttcaggtccag
gtaattctttgcaatggtacgtgcttgccctataagcctaatatcttgcg
tttgattctctgagcctttggaatacctaaagttggtggtgagcatctgt
aatcctagcatttctacactgagatgggagggagagagaagaacgtgata
ttcacgggtcagctaacctgaagtataccatgaagcagcagaaagaaaag
acctttcattaacaaaaggaaggagagaactgactcttgaaagttctatc
catataactcttgccttcacattgttcacactcaaacacacacacaca
gaattccctatgtagattcagagaattttttttccctgcctcctgagtgc
tgaatttcaaggtgtgggccactacaccctgatcaccacccaattacaat
ttcctatttttttggcagaatgctggctggttctttctccataccctcta
gggcaccaaggacagcttctcccgcaaagcccactttttttgttttgttt
tggatttacatgagattagaagaaataaagtccatgaactctggctgtcc
tcagtcttgctgggtagctgaagctcattttttttttttttttcctgaga
cagggtttctctgtgtagccctggctgtcctggaactcactctgtagacc
aagctggccttgaactcagaaatctgcctgcctctgcctcccaagtgctg
ggattaaaggtgtgatccaccattgctcaccttgaaactgatttttaatg
gaccctcctaccttagccatctcaagatgccacagctgatgactgacaga
gcaccagacttagcctttaactccagaacacatttctagttgtgcaaata
ataactttgagtttgttttttcctaagcttttctctattatttggcactt
gtgacactctgaactgactc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_87145674_87146473
seq2: B6Ng01-104E13.b_41_838

seq1  GAATTCACTCTGTAGACCAGGCTGGCCTCGAATTCAGAAATTCGACTTCC  50
      ||||||||||||||||||||||||||||  || || ||||||||||||||
seq2  GAATTCACTCTGTAGACCAGGCTGGCCT-TAAATCGGAAATTCGACTTCC  49

seq1  TCTACCTCCCAAATGCTGGGATTAAAGGCATGTACCACCATGCCTGGCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCTCCCAAATGCTGGGATTAAAGGCATGTACCACCATGCCTGGCCA  99

seq1  AAGAAAGTAAATTTCTTATTTGTATCTTTATTTTGAGTTTCTCACTAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGTAAATTTCTTATTTGTATCTTTATTTTGAGTTTCTCACTAAAC  149

seq1  TCTAAAATGTCTTACAAAAAAAAGTATCAAAGACATTCAAAGAATGATAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAATGTCTTACAAAAAAAAGTATCAAAGACATTCAAAGAATGATAC  199

seq1  AGGACTGGAGAAATAAAGTTTCTGGTTTTGAAAAAATACAGAAAAACTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTGGAGAAATAAAGTTTCTGGTTTTGAAAAAATACAGAAAAACTGG  249

seq1  TTTTCTTGCAGCAAAGGCAAGAATTTTGCTGGAGAATGTTAATTCTCTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTGCAGCAAAGGCAAGAATTTTGCTGGAGAATGTTAATTCTCTCC  299

seq1  AAACATGTTGAATTTATATCTGAAAGTTTTAAAACCACCAATACCAGCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGTTGAATTTATATCTGAAAGTTTTAAAACCACCAATACCAGCTC  349

seq1  TATCATATTCTATCTGAAACCATTAATTTTACTTTACAGTTCACAGGACG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATATTCTATCTGAAACCATTAATTTTACTTTACAGTTCACAGGACG  399

seq1  AATGCACAAATATCAATTGACCTGTCATGTGTGGCCCACACAGATTATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCACAAATATCAATTGACCTGTCATGTGTGGCCCACACAGATTATAA  449

seq1  AATGATATATATGCTATTAATTGGCTTTCAAAAATCATATTTCAGGTCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATATATATGCTATTAATTGGCTTTCAAAAATCATATTTCAGGTCCA  499

seq1  GGTAATTCTTTGCAATGGTACGTGCTTGCCCTATAAGCCTAATATCTTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAATTCTTTGCAATGGTACGTGCTTGCCCTATAAGCCTAATATCTTGC  549

seq1  GTTTGATTCTCTGAGCCTTTGGAATACCTAAAGTTGGTGGTGAGCATCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGATTCTCTGAGCCTTTGGAATACCTAAAGTTGGTGGTGAGCATCTG  599

seq1  TAATCCTAGCATTTCTACACTGAGATGGGAGGGAGAGAGAAGAACGTGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCCTAGCATTTCTACACTGAGATGGGAGGGAGAGAGAAGAACGTGAT  649

seq1  ATTCACGGGTCAGCTAACCTGAAGTATACCATGAAGCAGCAGAAAGAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACGGGTCAGCTAACCTGAAGTATACCATGAAGCAGCAGAAAGAAAA  699

seq1  GACCTTTCATTAACAAAAGGAAGGAGAGAACTGACTCTTGAAAGTTCTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTTCATTAACAAAAGGAAGGAGAGAACTGACTCTTGAAAGTTCTAT  749

seq1  CCATATAACTCTTGCCTTCACAATTGTACACACACAAACACACACACACA  800
      ||||||||||||||||||||| ||||| ||||| ||||||||||||||||
seq2  CCATATAACTCTTGCCTTCAC-ATTGTTCACACTCAAACACACACACACA  798

seq1: chr2_87337702_87338321
seq2: B6Ng01-104E13.g_67_686 (reverse)

seq1  GAGTCAGTCCAGAGTGTAACCTGTGCCTGATAATAGAGAAATGCTTAGAA  50
      |||||||| |||||||| ||  |||||  |||||||||||| |||||| |
seq2  GAGTCAGTTCAGAGTGTCACAAGTGCCAAATAATAGAGAAAAGCTTAGGA  50

seq1  AAAAACAAACTTAAAGTTATTATTTGCACAACTAGGAATGTGTTCTGGAG  100
      ||||||||||| ||||||||||||||||||||||| ||||||||||||||
seq2  AAAAACAAACTCAAAGTTATTATTTGCACAACTAGAAATGTGTTCTGGAG  100

seq1  TTCAAGGCTAAGTCTGGTGCTCTGTCAGTCATCAGCTGTGGCATCTTGAG  150
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGGCTAAGTCTGGTGCTCTGTCAGTCATCAGCTGTGGCATCTTGAG  150

seq1  ATGGCTAAGGTAGGAGGGTCCATTAAAAATCAGTTTCAAGGTGAGCAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTAAGGTAGGAGGGTCCATTAAAAATCAGTTTCAAGGTGAGCAATG  200

seq1  GTGGATCACACCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGCAGATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATCACACCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGCAGATT  250

seq1  TCTGAGTTCAAGGCCAGCTTGGTCTACAGAGTGAGTTCCAGGACAGCCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGTTCAAGGCCAGCTTGGTCTACAGAGTGAGTTCCAGGACAGCCAG  300

seq1  GGCTACACAGAGAAACCCTGTCTCAGGAAAAAAAAAAAAAAAATGAGCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTACACAGAGAAACCCTGTCTCAGGAAAAAAAAAAAAAAAATGAGCTT  350

seq1  CAGCTACCCAGCAAGACTGAGGACAGCCAGAGTTCATGGACTTTATTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTACCCAGCAAGACTGAGGACAGCCAGAGTTCATGGACTTTATTTCT  400

seq1  TCTAATCTCATGTAAATCCAAAACAAAACAAAAAAAGTGGGCTTTGCGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATCTCATGTAAATCCAAAACAAAACAAAAAAAGTGGGCTTTGCGGG  450

seq1  AGAAGCTGTCCTTGGTGCCCTAGAGGGTATGGAGAAAGAACCAGCCAGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCTGTCCTTGGTGCCCTAGAGGGTATGGAGAAAGAACCAGCCAGCA  500

seq1  TTCTGCCAAAAAAATAGGAAATTGTAATTGGGTGGTGATCAGGGTGTAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCCAAAAAAATAGGAAATTGTAATTGGGTGGTGATCAGGGTGTAGT  550

seq1  GGCCCACACCTTGAAATTCAGCACTCAGGAGGCAGGGAAAAAAAATTCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCACACCTTGAAATTCAGCACTCAGGAGGCAGGGAAAAAAAATTCTC  600

seq1  TGAATCTACATAGGGAATTC  620
      ||||||||||||||||||||
seq2  TGAATCTACATAGGGAATTC  620