BAC Information

Click to search

BAC

Clone NameB6Ng01-104P14
Chromosome12 (Build37)2 (Build37)
Map Location 10,765,327 - 10,765,370136,442,410 - 136,443,333
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC382567, Nt5c1b, Rdh14, LOC238074
Downstream geneLOC100042308, EG668435, Kcns3, LOC628276, Msgn1, 5830483C08Rik, Smc6, Vsnl1, EG209550, LOC217390
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-104P14.bB6Ng01-104P14.g
ACCDH913120DH913121
length342920
definitionDH913120|Mus musculus domesticus DNA, BAC clone: B6Ng01-104P14, 5' end.DH913121|Mus musculus domesticus DNA, BAC clone: B6Ng01-104P14, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(10,765,327 - 10,765,370)(136,442,410 - 136,443,333)
sequence
tattgatggattttcatatgtttaaccgtacatacctccctgagataaag
ccaacttgattgtggtagatgatttttaaaatatttttggattcattttg
caagtattttgttgagtacttttgcatctatatttatagagaaactggtt
tgaaattctctttctttgttgaatctctgtgtggtttaggtattagggtg
gctgaagcctcataaaatgaatttggtaatgttctttctgtttctgtttt
gtggaatattgatgttagcgcttgtttgaaagtctggcagaatactctgg
ccctaggattttgttgttgttgttggtggtggtggtggtgat
gaattcagggaagaatcctcgtctctgtctttggggaaaatggcaggttt
gggaggctgggaatatgttgagtatcaggtattatctgcaggggaaataa
gcaggctaaggataggcattagtgccttaagctctcatctaatcagggca
gaggtggagaagaacaaggttctccagcgctagaaccagggccagcaaat
ctagttcagaaaggattgtgatttttttttctacctaggaggtctgagct
catgtctgactcacctgatctttcatctgtttgtggtaaggcttacgcag
ttattagtcatgagagtctaaggatgttaatcttcagagtagaactttga
tttttttcttttttttttcctgcaaaatagcatgcagcatgcactgaaga
aattgcaagtattttactatatgattatccttgtaaatcacagtaggcaa
tgggatttttttcccttatttaggttggccttcaatttctatataaaacc
caacaaagaaggatacaagctaaaggctaaaaattggataaattatggga
aagaggggtggatgggtgatattacacacacatatgcatatgataaatca
ttagagtgtggtggtgcaagcccataaacttgaagttagctcaactatct
aatgtttacagaataaaatcccactatagaaaaacaagcaaaaaggtaat
aagaaaaatgccccaaaccaattgggaaatctaagcagttgcttgcatga
tgacctatggcccagagaaagttttctttgcatgttaggtgccaagatgg
gatggaagactgtcttgatagagggtgaaaaaggataaaagtggaggagg
ggcaggaggagaaggaggaaagttgaggaggacaggaagaaaggaagagg
atgggggagaagaatgaaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_10765327_10765370
seq2: B6Ng01-104P14.b_356_393 (reverse)

seq1  ACCACCACCACCACCACCAACAACAACAACAACAACAAAATCCT  44
      | |||||||||||||||      |||||||||||||||||||||
seq2  ATCACCACCACCACCAC------CAACAACAACAACAAAATCCT  38

seq1: chr2_136442410_136443333
seq2: B6Ng01-104P14.g_68_987 (reverse)

seq1  CTTTCATTCTTTCTCCCCC-TCCTCTTCCTTTTCTTCCTGTTCCTCCTCT  49
      ||||||||| ||||||||| ||||||||| |||||||||| |||||||| 
seq2  CTTTCATTC-TTCTCCCCCATCCTCTTCC-TTTCTTCCTG-TCCTCCTCA  47

seq1  ACTTTTCCTCCTTCTCCTCCTTGCCCCTCCTCCACTTTTATCCTTTTTCA  99
      || ||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AC-TTTCCTCCTTCTCCTCC-TGCCCCTCCTCCACTTTTATCCTTTTTCA  95

seq1  CCCTCTATCAAGACAGTCTTCCATCCCATCTTGGCACCTAACATGCAAAG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTATCAAGACAGTCTTCCATCCCATCTTGGCACCTAACATGCAAAG  145

seq1  AAAACTTTCTCTGGGCCATAGGTCATCATGCAAGCAACTGCTTAGATTTC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTTTCTCTGGGCCATAGGTCATCATGCAAGCAACTGCTTAGATTTC  195

seq1  CCAATTGGTTTGGGGCATTTTTCTTATTACCTTTTTGCTTGTTTTTCTAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTGGTTTGGGGCATTTTTCTTATTACCTTTTTGCTTGTTTTTCTAT  245

seq1  AGTGGGATTTTATTCTGTAAACATTAGATAGTTGAGCTAACTTCAAGTTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGATTTTATTCTGTAAACATTAGATAGTTGAGCTAACTTCAAGTTT  295

seq1  ATGGGCTTGCACCACCACACTCTAATGATTTATCATATGCATATGTGTGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCTTGCACCACCACACTCTAATGATTTATCATATGCATATGTGTGT  345

seq1  GTAATATCACCCATCCACCCCTCTTTCCCATAATTTATCCAATTTTTAGC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATATCACCCATCCACCCCTCTTTCCCATAATTTATCCAATTTTTAGC  395

seq1  CTTTAGCTTGTATCCTTCTTTGTTGGGTTTTATATAGAAATTGAAGGCCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGCTTGTATCCTTCTTTGTTGGGTTTTATATAGAAATTGAAGGCCA  445

seq1  ACCTAAATAAGGGAAAAAAATCCCATTGCCTACTGTGATTTACAAGGATA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAAATAAGGGAAAAAAATCCCATTGCCTACTGTGATTTACAAGGATA  495

seq1  ATCATATAGTAAAATACTTGCAATTTCTTCAGTGCATGCTGCATGCTATT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATATAGTAAAATACTTGCAATTTCTTCAGTGCATGCTGCATGCTATT  545

seq1  TTGCAGGAAAAAAAAAAGAAAAAAATCAAAGTTCTACTCTGAAGATTAAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGGAAAAAAAAAAGAAAAAAATCAAAGTTCTACTCTGAAGATTAAC  595

seq1  ATCCTTAGACTCTCATGACTAATAACTGCGTAAGCCTTACCACAAACAGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTAGACTCTCATGACTAATAACTGCGTAAGCCTTACCACAAACAGA  645

seq1  TGAAAGATCAGGTGAGTCAGACATGAGCTCAGACCTCCTAGGTAGAAAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGATCAGGTGAGTCAGACATGAGCTCAGACCTCCTAGGTAGAAAAA  695

seq1  AAAATCACAATCCTTTCTGAACTAGATTTGCTGGCCCTGGTTCTAGCGCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCACAATCCTTTCTGAACTAGATTTGCTGGCCCTGGTTCTAGCGCT  745

seq1  GGAGAACCTTGTTCTTCTCCACCTCTGCCCTGATTAGATGAGAGCTTAAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAACCTTGTTCTTCTCCACCTCTGCCCTGATTAGATGAGAGCTTAAG  795

seq1  GCACTAATGCCTATCCTTAGCCTGCTTATTTCCCCTGCAGATAATACCTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTAATGCCTATCCTTAGCCTGCTTATTTCCCCTGCAGATAATACCTG  845

seq1  ATACTCAACATATTCCCAGCCTCCCAAACCTGCCATTTTCCCCAAAGACA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTCAACATATTCCCAGCCTCCCAAACCTGCCATTTTCCCCAAAGACA  895

seq1  GAGACGAGGATTCTTCCCTGAATTC  924
      |||||||||||||||||||||||||
seq2  GAGACGAGGATTCTTCCCTGAATTC  920