BAC Information

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BAC

Clone NameB6Ng01-105J15
Chromosome2 (Build37)16 (Build37)
Map Location 142,776,479 - 142,777,00919,232,869 - 19,233,436
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-105J15.bB6Ng01-105J15.g
ACCDH913577DH913578
length763592
definitionDH913577|Mus musculus domesticus DNA, BAC clone: B6Ng01-105J15, 5' end.DH913578|Mus musculus domesticus DNA, BAC clone: B6Ng01-105J15, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(142,776,479 - 142,777,009)(19,232,869 - 19,233,436)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcaattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttaaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggtttttttgttattccagac
aaatttgcaaattgctcctttccaattcgttgaagaattgagttggaatt
tttgatggggatt
gaattctcttcctttattactattaatctttgatttggtcttttcattgt
gtcccagatttacttgatgttttatgtcaggaatattttagatttaaccc
ttgctgtgacaaatgtattgatatcttatattctattcctatgcttttct
cttccatctcacttgagcctgtagtttctgttctcttacttaggttttta
ttgccaggattccctcagtttgtgggttttcatttgtctgtttgtttgct
atgttgtgcttttgctttttattgttggtttttattgcttctatcttcct
tttcagattctgaactctgttagtcatttccttcacatgtttgatttatt
ttcctgtgtttctacttggaattcatttatttcctctttagaagtctcta
ttatcttcataaggcttgattaaaggtcattttgttgtatttctcctgtg
ctaacatatccagggtgctggtggtgtcaaattgctctggctattgttat
ttgtgctcacttttaacctatctgtgctttgtttttattataggtttaga
tgctaactttaagtttatcttgttggatgggtggagtttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776479_142777009
seq2: B6Ng01-105J15.b_268_801 (reverse)

seq1  AATCCCCATC-AAAATTCCAACTCAATTCTTCAACGAATTAG-AAGGAGC  48
      |||||||||| ||||||||||||||||||||||||||||| | |||||||
seq2  AATCCCCATCAAAAATTCCAACTCAATTCTTCAACGAATTGGAAAGGAGC  50

seq1  AATTTGCAAATTCATCTGGAATAAC-AAAAAACCTAGGATAGCAAAAAGT  97
      ||||||||||||  ||||||||||| ||||||||||||||||||||||||
seq2  AATTTGCAAATTTGTCTGGAATAACAAAAAAACCTAGGATAGCAAAAAGT  100

seq1  CTTCTCAAGGATAAAAGAACCTCTGGTGGAATCACCATGCCTGACCTAAA  147
      |||||||||||||||||||| ||||| |||||||||||||| ||||||||
seq2  CTTCTCAAGGATAAAAGAACTTCTGGCGGAATCACCATGCCAGACCTAAA  150

seq1  GCTTTACTACAGAGCAATTGTGATAAAAACTGCATGGTACTGGTATAGAG  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTACTACAGAGCAATTGTGATAAAAACTGCATGGTACTGGTATAGAG  200

seq1  ACAGACAAGTAGACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCA  247
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  ACAGACAAGTAGACCAATGGAATAGAATTTAAGACCCAGAAATGAACCCA  250

seq1  CACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGAG  297
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGTG  300

seq1  GAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTAT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTAT  350

seq1  CATGTAGAAGAATGGGAATCGATCCATACTTATCTCCTTGTACTAAGGTC  397
      | |||||||||||| |||| ||||||||||||||||||||||||||||||
seq2  CGTGTAGAAGAATGCGAATTGATCCATACTTATCTCCTTGTACTAAGGTC  400

seq1  AAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACT  450

seq1  TATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGACA  497
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGAAA  500

seq1  AATTCCTGAACAGAACAGCAATGGCTTGTGCTGT  531
      ||||||||||||||||||||||||||||||||||
seq2  AATTCCTGAACAGAACAGCAATGGCTTGTGCTGT  534

seq1: chr16_19232869_19233436
seq2: B6Ng01-105J15.g_95_662 (reverse)

seq1  AAAAAACTCCACCCATCCAACAAGATAAACTTAAAGTTAGCATCTAAACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACTCCACCCATCCAACAAGATAAACTTAAAGTTAGCATCTAAACC  50

seq1  TATAATAAAAACAAAGCACAGATAGGTTAAAAGTGAGCACAAATAACAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATAAAAACAAAGCACAGATAGGTTAAAAGTGAGCACAAATAACAAT  100

seq1  AGCCAGAGCAATTTGACACCACCAGCACCCTGGATATGTTAGCACAGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGAGCAATTTGACACCACCAGCACCCTGGATATGTTAGCACAGGAG  150

seq1  AAATACAACAAAATGACCTTTAATCAAGCCTTATGAAGATAATAGAGACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACAACAAAATGACCTTTAATCAAGCCTTATGAAGATAATAGAGACT  200

seq1  TCTAAAGAGGAAATAAATGAATTCCAAGTAGAAACACAGGAAAATAAATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAGAGGAAATAAATGAATTCCAAGTAGAAACACAGGAAAATAAATC  250

seq1  AAACATGTGAAGGAAATGACTAACAGAGTTCAGAATCTGAAAAGGAAGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGTGAAGGAAATGACTAACAGAGTTCAGAATCTGAAAAGGAAGAT  300

seq1  AGAAGCAATAAAAACCAACAATAAAAAGCAAAAGCACAACATAGCAAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCAATAAAAACCAACAATAAAAAGCAAAAGCACAACATAGCAAACA  350

seq1  AACAGACAAATGAAAACCCACAAACTGAGGGAATCCTGGCAATAAAAACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGACAAATGAAAACCCACAAACTGAGGGAATCCTGGCAATAAAAACC  400

seq1  TAAGTAAGAGAACAGAAACTACAGGCTCAAGTGAGATGGAAGAGAAAAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTAAGAGAACAGAAACTACAGGCTCAAGTGAGATGGAAGAGAAAAGC  450

seq1  ATAGGAATAGAATATAAGATATCAATACATTTGTCACAGCAAGGGTTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGAATAGAATATAAGATATCAATACATTTGTCACAGCAAGGGTTAAA  500

seq1  TCTAAAATATTCCTGACATAAAACATCAAGTAAATCTGGGACACAATGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAATATTCCTGACATAAAACATCAAGTAAATCTGGGACACAATGAA  550

seq1  AAGACCAAATCAAAGATT  568
      ||||||||||||||||||
seq2  AAGACCAAATCAAAGATT  568