BAC Information

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BAC

Clone NameB6Ng01-105M13
Chromosome2 (Build37)
Map Location 80,825,513 - 80,826,058
singlet/doubletsinglet
Overlap genenone
Upstream genePde1a, LOC668005, Prdx6-rs1, Dnajc10, Frzb, Nckap1, LOC624223, Dusp19, LOC672381, Nup35, LOC103324, LOC668027, LOC100040624
Downstream geneLOC100040655, LOC100040704
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-105M13.bB6Ng01-105M13.g
ACCDH913710DH913711
length1,042863
definitionDH913710|Mus musculus domesticus DNA, BAC clone: B6Ng01-105M13, 5' end.DH913711|Mus musculus domesticus DNA, BAC clone: B6Ng01-105M13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccatttaaaaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcgattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggcgtgtgggttcatttctggatcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aattttgcaaattgctcccttctaattcgttgaagaattgagttggaatt
atgatgggggattgcattgaatctgtagattgcttttgggcaagatagcc
atttttttacatgttgatcctgcccatccatgagcatggggagatctttc
catcttctgagatcttcttaatttctttcttcagagatttgaagttttta
tcatacagatctttcacctccttgatagagtcacgcccagatatttatat
tatttgtgactattgaggagggtgttgtttcctaatttctttctcacccg
gtaattcttgtataaaagaatgcttttttcttgttgaagtta
gaattcatatgtagatatgatctacaatatgtaaataacttccaaacatg
atctggagactgctatatcaggcttctgtcagcaagcacttcatggcatc
cacaatagtgtctgggtttggtgtctgtatatgggaatggatccctaggt
ggggcagtctctggatggtctttcctacagtctctgctccacgctttgtc
tctgtatttcctcccatattttgttcccctttctaagaaggactgaagca
tccacactttggtcttccttcttcttgagtttcatgtggtctgtgaattg
tattttgggtattccaagctttgggctaatatcagtgagtgtgttctttt
ctgactgggttaccccactcaggatgatattttctagttccatccacttg
cctaagaatttcatgaattcattgtttttaatagctgagtaatactccat
tgtgtaaatgcaccacatttctgcatccattcctctgttaaatgacatct
aggttctttccagcttctggctattataaataagactgctataaacatag
tgaagcatgtgtgtccttgttatatgttggagcatcttttgggcatatga
cccagagtgggtatagctgggtcctcaggtaatactaagtccagtttttc
tgaggaaccatcagactgattttcagagtagttgtaccagcttgcagtcc
caccagcaatgggaggagtgtttctctttcttcacattcttgccagcatc
tgctgtcacctgagtttttgatctcagctcattgtgactggtatgaggtg
gaagttctagttgtatcccaagtatgccaggcttcatccttattcaaagg
catgagagaggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_80825513_80826058
seq2: B6Ng01-105M13.g_383_931 (reverse)

seq1  TTCCTCTCTCATGCCTTTGAATATGGATGAAGCCTGGCATACTTGGGATA  50
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TTCCTCTCTCATGCCTTTGAATAAGGATGAAGCCTGGCATACTTGGGATA  50

seq1  CAACCTAGAACTTCCACCTCATACCAGTCACAATG-GCTGAGATCAAAAA  99
      ||| ||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CAA-CTAGAACTTCCACCTCATACCAGTCACAATGAGCTGAGATCAAAAA  99

seq1  CTCAGGTGACAGCAGATGCTGGCAAGAATGTGAAGAAAGAGGAACACTCC  149
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CTCAGGTGACAGCAGATGCTGGCAAGAATGTGAAGAAAGAGAAACACTCC  149

seq1  T-CCATTGCTGGTGGGACTGCAAGCTGGTACAACTACTCTGAAAATCAGT  198
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATTGCTGGTGGGACTGCAAGCTGGTACAACTACTCTGAAAATCAGT  199

seq1  CTGATGGTTCCTCAG-AAAACTGGACTTAGTATTACCTGAGGACCCAGCT  247
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CTGATGGTTCCTCAGAAAAACTGGACTTAGTATTACCTGAGGACCCAGCT  249

seq1  ATA-CCACTCTGGGTCATATGCCCAAAAGATGCTCCAACATATAACAAGG  296
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCCACTCTGGGTCATATGCCCAAAAGATGCTCCAACATATAACAAGG  299

seq1  ACACACATGCTTCACTATGTTTATAGCAGTCTTATTTATAATAGCCAGAA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACATGCTTCACTATGTTTATAGCAGTCTTATTTATAATAGCCAGAA  349

seq1  GCTGGAAAGAACCTAGATGTCATTTAACAGAGGAATGGATGCAGAAATGT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAAAGAACCTAGATGTCATTTAACAGAGGAATGGATGCAGAAATGT  399

seq1  GGTGCATTTACACAATGGAGTATTACTCAGCTATTAAAAACAATGAATTC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCATTTACACAATGGAGTATTACTCAGCTATTAAAAACAATGAATTC  449

seq1  ATGAAATTCTTAGGCAAGTGGATGGAACTAGAAAATATCATCCTGAGTGG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATTCTTAGGCAAGTGGATGGAACTAGAAAATATCATCCTGAGTGG  499

seq1  GGTAACCCAGTCAGAAAAGAACACACTCACTGATATTAGCCCAAAGCTTG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAACCCAGTCAGAAAAGAACACACTCACTGATATTAGCCCAAAGCTTG  549