BAC Information

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BAC

Clone NameB6Ng01-106E06
Chromosome2 (Build37)
Map Location 142,776,687 - 142,777,698
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-106E06.bB6Ng01-106E06.g
ACCDH914052DH914053
length998994
definitionDH914052|Mus musculus domesticus DNA, BAC clone: B6Ng01-106E06, 5' end.DH914053|Mus musculus domesticus DNA, BAC clone: B6Ng01-106E06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagttctgagccccatccttttaagggggttatttgat
tttctgaggtccaccttcttgagttctttatatatgttggatattagtcc
cctatctgatttaggataggtaaagatcctttcccagtctgttggtggtc
tttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttc
attaggtcccatttgtcaattctcgatcttacagcacaagccattgctgt
tctgttcaggaatttttcccctgtgcccatatcttcaaggcttttcccca
ctttctcctctataagtttcagtgtctctggttttatgtgaagttccttg
atccacttagatttgaccttagtacaaggagatagaaatggatctattcg
cattcttctacatgataacaaccagttgtgccagcaccaattgttgaaaa
tgctgtctttcttccactggatggttttggctcccttgacgaagatcaag
tgaccataggtgtgtgggttcatttctgggtcttcaattctattccattg
gtccacttgtctgtctctataccagtaccatgcagtttttatcacaattg
ctctgtagtaaagctttaggtcaggcatggtgattccaccagaggttctt
ttatccttgagaagagtttttgctatcctcggttttttgttattccagat
gaatttgcaaattgctccttctaattcgttgaagaattgagttggaattt
taatggggattgcattgaatctgtagattgcttttggcaagatagccatt
tttacaatgttggtcctgccaatccatgagcatgggagatctttccatct
tctgagatcttctttaatttctttcttcagggacttgaagtttttatcat
acagatctttcacttctttcgttagagtccgccgagatattttatattat
ttgtggctattgagaaggtgttgtttccctaatttctttctcagcctg
gaattctcacctgagggataccgaatggcagagaagcaactgaaaaaatg
ttcaacatttaatcatcagggaaatgcaaatcaaaacaaccctgagattc
acctcacaccagtcagaatggctaagatcaaaaattcaggtgacaactta
tgctggcaagtatgtggagaaagaggaacactcctccattgttgttggga
ttgcaagcttgtacaaccactctggaaatcagtttggtggtttctcagag
aattggacatagtactaccggaggatcctgcaatacctctcctgggcata
tattcagaagatgtctcaactggtaagaaggacacatgctccactatctt
catggcagccttatttatagtagccagaagctggaaagaactcagatgcc
cctaaacagaggaatggatacagaaagtgtggaacatttacacaatggag
tactactcagctaataaaaagaatgaatttatgaaattcctatgcaaatg
gatggaccgtgagggcatcatcctgagtgaggtaacccgatcacaaagga
actcacacaatatgtactcactgataagtagatattagcccagaaactta
ggatacccaagatataagacacaatttgctaaacacatgaaactcaaaag
gaacgaagaccggagtgtggacactttgccccttcttagaatgggaacaa
aacacacatgaaaggagttacagtgacaatgtttggagctgtgatgaaac
gatggaccatctagagactgcaatattcggggagccatcccataatcagc
ttccaaatgctgacaccatgcatacactaacaaggttttgctgaaaggac
ccagaatatagttgtctcttgtgagactatgctggggcctagcaaacaca
taagttgatggctcacattcagctatggacggatcactgggctccaattg
gagaatctagagaaatacctaggagcaaaagggatcggctacgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776687_142777698
seq2: B6Ng01-106E06.b_46_598 (reverse)

seq1  GACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCACACACCTATGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCACACACCTATGG  50

seq1  TCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGAGGAAGAAAGACA  100
      |||||||||||||| ||||||||| |||||||||||| ||||||||||||
seq2  TCACTTGATCTTCGTCAAGGGAGCCAAAACCATCCAGTGGAAGAAAGACA  100

seq1  GCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCATGTAGAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCATGTAGAAGA  150

seq1  ATGGGAATCGATCCATACTTATCTCCTTGTACTAAGGTCAAATCTAAGTG  200
      ||| |||| |||||||   |||||||||||||||||||||||||||||||
seq2  ATGCGAATAGATCCATTTCTATCTCCTTGTACTAAGGTCAAATCTAAGTG  200

seq1  GATCAAGGAACTTCACATAAAACCAGAGACACTGAAACTTATAGAGGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAAGGAACTTCACATAAAACCAGAGACACTGAAACTTATAGAGGAGA  250

seq1  AAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGACAAATTCCTGAAC  300
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGAAAAATTCCTGAAC  300

seq1  AGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAAATGGGACCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAAATGGGACCT  350

seq1  AATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGTCAATAAGACAA  400
      |||||||||||||||||||||||||||||||||||| ||| |||||||||
seq2  AATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACTGTCTATAAGACAA  400

seq1  AAAGACCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGAT  450
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AAAGACCACCAACAGACTGGGAAAGGATCTTTACCTATCCTAAATCAGAT  450

seq1  AGGGGACTAATATCCAACATATATAAAGAACTCAAGAAGGTGGACTTCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AGGGGACTAATATCCAACATATATAAAGAACTCAAGAAGGTGGACCTCAG  500

seq1  AAAATCAAATAACCCCATTAAAA-AATGGGGCTCACAAAACCATCCAGTG  549
      |||||||||||||||| ||||||  |||||||||| ||            
seq2  AAAATCAAATAACCCCCTTAAAAGGATGGGGCTCAGAA----------CT  540

seq1  GAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTAT  599
      ||| |||||    |||                                  
seq2  GAACAAAGA----ATTC---------------------------------  553

seq1  CATGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTGTACTAAGGTC  649
                                                        
seq2  --------------------------------------------------  553

seq1  AAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACT  699
                                                        
seq2  --------------------------------------------------  553

seq1  TATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGAAA  749
                                                        
seq2  --------------------------------------------------  553

seq1  AATTCCTGAACAGAAGAGCAATGGCTTGTGCTGTAAGATCGAGAATTGAC  799
                                                        
seq2  --------------------------------------------------  553

seq1  AAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACTGT  849
                                                        
seq2  --------------------------------------------------  553

seq1  CTATAAGACAAAAAGACCACCAACAGACTGGGAAAGGATCTTTACCTATC  899
                                                        
seq2  --------------------------------------------------  553

seq1  CTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCAAGAAG  949
                                                        
seq2  --------------------------------------------------  553

seq1  GTGGACCTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAACT  999
                                                        
seq2  --------------------------------------------------  553

seq1  GAACAAAGAATTC  1012
                   
seq2  -------------  553