BAC Information

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BAC

Clone NameB6Ng01-106G02
Chromosome2 (Build37)
Map Location 53,281,691 - 53,282,903
singlet/doubletsinglet
Overlap geneLOC666872
Upstream geneCacnb4, OTTMUSG00000012638, Stam2, Fmnl2, Prpf40a, Arl6ip6
Downstream geneLOC666876, LOC207933, Rprm, LOC666913, LOC626563, LOC100041792
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-106G02.bB6Ng01-106G02.g
ACCDH914137DH914138
length1,198736
definitionDH914137|Mus musculus domesticus DNA, BAC clone: B6Ng01-106G02, 5' end.DH914138|Mus musculus domesticus DNA, BAC clone: B6Ng01-106G02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattattaaggaactcccctgacctttgttccttacgaacacttc
ttgatacgatttctgacattccgactttcacaatcccctttctattacat
cttcaaaactattgaagctcttcatgtgccttctaaaggaaaccttttat
ccgcaggaaaacagcattgcagacaaacacaattacagatacatgagacc
atatggcttcatattcgtggatttcacattttaaaattcaacactgtaaa
ctctccaacttctttctcctataggcatttttgctttgcactccctttct
cagtaattgactctaccatttactatatattcctaccaggaatcaaaaac
tcattattcactccattttctctacatcttttgaaaggactcttcaattt
caactgttctgtgtgtgtgtgcatggtaggggtacatatacacgcacagt
agtactttagttatggttataatgctgtgaacagactccttgatcaaggc
aactcttataaggacagcatttaattggggctgacttacaggttcaaggt
tcagtctattatcaaggcaggagcatggcagaatctaggcatgcaaggta
caggagcagctgagagttttacatcttaatctgaaggctgctaggagaag
actcgctcttctgcactgggcagagcttcaaaggctactccacagtgatg
cacttcctccaacaaggccattcctccaacaaggccatacctcctaatac
tgtcactccctaggccaagcatattcaaacaatcacagctggcatgtgat
ggggattgaactcaggtctttgtttatagtaggcaagcccttaaccttca
agggtatccaaagctacttgaaacagggtctcaccataaagctcagagtg
ttcctgacctgactatacagcttcattagcctcagcttgccaacattctg
ccttgacccatctctgacctcaatgctttgtcctgtggaagttaacaggg
aggcaaagttatttacttcatggccagtaaattgaaaaagtactagaagg
aactgaagtcaactaccttttaaggacatattttctataacctaaagacc
tccactggactgactaatcaagcctgacaagtcttagcagactcaatctg
gacagccctgcggacctaccagttcagctagttccactcaccatgctg

gaattccaccttacaccaatcagaatggctaagatcaaaaactcaggtga
ctgcagatgctggtgaggatacagagaaagatgaacactcctccattgct
agtgggattacaaactagtacaaccactttggaaattaatttggcagttc
ctgaaaaaattggaactagttctacctgaagacccagctataccactcct
gggcacatatccaaaagatgctccaaaatataacaaggacacatgctccc
ctatgtccatagcagccttatgtataatagccagaagctggaaacaaccc
agatgtccttcaatggaagaaaagatacagaaaatgtggtacatttatag
aacagaatactattcagctattaaaaatgatgacttcatgaactttgtag
gcaaatgggtggaactagaagatatcattctgagttaggtaacccagacc
ccaaaggacatgcttggtatgtactcactgataagtgaaatattagcccc
aaagctcagaatatccatgatacaactcacagaccatatgaagcttaaca
agaaagaaggccaaagtatagatgcttcaaaaccacttaaaagggggaac
aaaataatcatgggaggtagatggagggagagacctagatgggagagggg
aggggagaaaaagaacggggtaggactagtatggggaagatataggaaag
cagaagtaataaaaaataagtagtagtgcgtagcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_53281691_53282903
seq2: B6Ng01-106G02.b_49_1246 (reverse)

seq1  CAGCATGGTGAGTGAGAACTAGCTGTGACTTGGATAAGTGTCTGGCAGGG  50
      |||||||||||||| ||||||||||  |||  | || ||     ||||||
seq2  CAGCATGGTGAGTG-GAACTAGCTG-AACT--GGTAGGT---CCGCAGGG  43

seq1  CTTGCTCCCAGATTGATGCTGCTAAGACTTGTCAGAGCCTTGATTAGGTC  100
      ||     |||||||||  |||||||||||||||  || |||||||| |||
seq2  CT---GTCCAGATTGAGTCTGCTAAGACTTGTC--AGGCTTGATTA-GTC  87

seq1  AGGTCCAGTGGGAGGTCTTTAGGTTATTAGAAATATGTCCTTGAAAGGGT  150
      | ||||||| |||||||||||||||||   |||||||||||| ||| |||
seq2  A-GTCCAGT-GGAGGTCTTTAGGTTATAGAAAATATGTCCTT-AAAAGGT  134

seq1  AGTTGAACTTCAGTTCC-TCTAGTACTTTTTCAATTT-CTGGCCATGAAG  198
      ||||| ||||||||||| ||||||||||||||||||| ||||||||||||
seq2  AGTTG-ACTTCAGTTCCTTCTAGTACTTTTTCAATTTACTGGCCATGAAG  183

seq1  TAAATAACTTTGCCTCCCTGTTAAC-TCCACAGGACAAAGCATTGAGGTC  247
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TAAATAACTTTGCCTCCCTGTTAACTTCCACAGGACAAAGCATTGAGGTC  233

seq1  AAGAGATGGGTCAAGGCAGAATGTTGGCAAGCTGAGGCTAATGAAGCTGT  297
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -AGAGATGGGTCAAGGCAGAATGTTGGCAAGCTGAGGCTAATGAAGCTGT  282

seq1  ATAGTCAGGTCAGGAACACTCTGAGCTTTATGGTGAGACCCTGTTTCAAG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTCAGGTCAGGAACACTCTGAGCTTTATGGTGAGACCCTGTTTCAAG  332

seq1  TAGCTTTGGATACCCTTGAAGGTTAAGGGCTTGCCTACTATAAACAAAGA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTTGGATACCCTTGAAGGTTAAGGGCTTGCCTACTATAAACAAAGA  382

seq1  CCTGAGTTCAATCCCCATCACATGCCAGCTGTGATTGTTTGAATATGCTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGTTCAATCCCCATCACATGCCAGCTGTGATTGTTTGAATATGCTT  432

seq1  GGCCTAGGGAGTGACAGTATTAGGAGGTATGGCCTTGTTGGAGGAATGGC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTAGGGAGTGACAGTATTAGGAGGTATGGCCTTGTTGGAGGAATGGC  482

seq1  CTTGTTGGAGGAAGTGCATCACTGTGGAGTAGCCTTTGAAGCTCTGCCCA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTGGAGGAAGTGCATCACTGTGGAGTAGCCTTTGAAGCTCTGCCCA  532

seq1  GTGCAGAAGAGCGAGTCTTCTCCTAGCAGCCTTCAGATTAAGATGTAAAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAGAAGAGCGAGTCTTCTCCTAGCAGCCTTCAGATTAAGATGTAAAA  582

seq1  CTCTCAGCTGCTCCTGTACCTTGCATGCCTAGATTCTGCCATGCTCCTGC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCAGCTGCTCCTGTACCTTGCATGCCTAGATTCTGCCATGCTCCTGC  632

seq1  CTTGATAATAGACTGAACCTTGAACCTGTAAGTCAGCCCCAATTAAATGC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATAATAGACTGAACCTTGAACCTGTAAGTCAGCCCCAATTAAATGC  682

seq1  TGTCCTTATAAGAGTTGCCTTGATCAAGGAGTCTGTTCACAGCATTATAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTTATAAGAGTTGCCTTGATCAAGGAGTCTGTTCACAGCATTATAA  732

seq1  CCATAACTAAAGTACTACTGTGCGTGTATATGTACCCCTACCATGCACAC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAACTAAAGTACTACTGTGCGTGTATATGTACCCCTACCATGCACAC  782

seq1  ACACACAGAACAGTTGAAATTGAAGAGTCCTTTCAAAAGATGTAGAGAAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACAGAACAGTTGAAATTGAAGAGTCCTTTCAAAAGATGTAGAGAAA  832

seq1  ATGGAGTGAATAATGAGTTTTTGATTCCTGGTAGGAATATATAGTAAATG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGTGAATAATGAGTTTTTGATTCCTGGTAGGAATATATAGTAAATG  882

seq1  GTAGAGTCAATTACTGAGAAAGGGAGTGCAAAGCAAAAATGCCTATAGGA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGTCAATTACTGAGAAAGGGAGTGCAAAGCAAAAATGCCTATAGGA  932

seq1  GAAAGAAGTTGGAGAGTTTACAGTGTTGAATTTTAAAATGTGAAATCCAC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAGTTGGAGAGTTTACAGTGTTGAATTTTAAAATGTGAAATCCAC  982

seq1  GAATATGAAGCCATATGGTCTCATGTATCTGTAATTGTGTTTGTCTGCAA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATGAAGCCATATGGTCTCATGTATCTGTAATTGTGTTTGTCTGCAA  1032

seq1  TGCTGTTTTCCTGCGGATAAAAGGTTTCCTTTAGAAGGCACATGAAGAGC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTTTTCCTGCGGATAAAAGGTTTCCTTTAGAAGGCACATGAAGAGC  1082

seq1  TTCAATAGTTTTGAAGATGTAATAGAAAGGGGATTGTGAAAGTCGGAATG  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATAGTTTTGAAGATGTAATAGAAAGGGGATTGTGAAAGTCGGAATG  1132

seq1  TCAGAAATCGTATCAAGAAGTGTTCGTAAGGAACAAAGGTCAGGGGAGTT  1197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAATCGTATCAAGAAGTGTTCGTAAGGAACAAAGGTCAGGGGAGTT  1182

seq1  CCTTAATAATGAATTC  1213
      ||||||||||||||||
seq2  CCTTAATAATGAATTC  1198


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