BAC Information

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BAC

Clone NameB6Ng01-107G13
Chromosome2 (Build37)
Map Location 16,417,279 - 16,418,424
singlet/doubletsinglet
Overlap genePlxdc2
Upstream geneLOC625457
Downstream gene4930515L03Rik, LOC383665, Nebl
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107G13.bB6Ng01-107G13.g
ACCDH914885DH914886
length1,1341,131
definitionDH914885|Mus musculus domesticus DNA, BAC clone: B6Ng01-107G13, 5' end.DH914886|Mus musculus domesticus DNA, BAC clone: B6Ng01-107G13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgtaccccattttttaatgaggttatttgatt
ttctggagtcaatcttcttgagttctttatatatattggatattagtccc
ctatctgatttaggattggtaaagatcctttaccaatctgctggtggcct
ttttgtcttattgacagtgtcttttgccttacagaaggtttgcgatttta
tgaggtctcacttgtccattatcaatcttacagcacaagccattgctgtt
ctgttcaggaattttccccctctgcccatatctttggcatatatccagaa
gatgctccaacttgtaatgagaacacatgctccagtatgttcatagcagc
cttatttataatagccagaagctggaaagaacccagatgtccttcaacag
agaaatggatacagaaactgtggtacatttacacaatggagtagtactca
gcaattacaaacaatgaatttataaaattcttaggcaaatggatgtatat
ggaggatattctgaacgaggtaacccagtcacaaaagaaaacacatgata
tgcactcactgataagcagatattagcctagaaacttagaatacccaaga
tacaatttgcaaaacacatgaaactcaagaaggaagaccaaagtgtggat
acttcgatccttcttaaaatggggaacaaaatatccatggaaggagttac
agagagaaagtttggagctgagacggaaagaaggaccatccagagactgc
cacacccgggcatccatcccatattcaatcaccaaacccagacacaattg
aatatgccagaaagattttgcagacaaaaccctgatatagctcttttttg
tgaggctatgccagtgcctggcaaatacagaagtggatgctcacagccat
ctattggatggaacacaggctcctaatgaaggagctaaaggggtctgcac
accataggagaacacatatgaactaccagtacccctagagctgtgtctgt
agttgcatatgtagcagatgatgtctagtcagccatcaatgggaggagag
acccttggtctgtgaagatcatatgcctcagtacaggggaattgcaaggc
agaagagggagtgggttgtttggggaacatggtt
gaattctctttcctgtctctggagacaaagggcaatttcaaaaaacacat
aaagtacaaaaacacatataatggtgcatggatattggttttgtctgatt
ttcaaaatggaaaagactggcatatatctttgggaccttacattaactcc
taatttgcatgtactcctttgaaaagcatttttattatgtactactattt
cccacagtagtccttcagtaacacagagcaacctcattgctccaatttcc
gaatcaaagggagtcacctacaaacttccgtgtcccaccaggcccccacc
ttcagccaatcataggttgatccctcagcccaaggattctgacatcagaa
tccattacagcatccacagaaaagctaaggggacattcagtttcattatt
ctctttctgtgaggctgatatttatttatttaacatccactccaatccat
tgtcatccactttggcttataacatccaatgtgaagatggaaaaaaaatg
gtagaagttagaaataactagaagcgagatttgtttggaatgcaaatgca
accaacataggaggtacacatgagaggctcaaactggtattgtttgcttt
tcttgcctgataaaattgataacccatacgaatatgaagggtttgaacaa
actgctagaccatggcacaaaagctaatttattacctgatagttaatttt
tccttttacaatgtaaacacatggggattaactggaatgattgcctacct
aggtgaggtactcagaaaaatctagaattcatttctcaattaggcaccta
catccttcaaagaaaaagtgtgggtgtcaaaatgcaggtctgactcacca
tatccaaactggactttagaattaggcattcggtgatcccctgggagatg
ccactcacaatctagttctacaggtaacattgggaacatccaaactagaa
acaggctaaccagaagactgcaaaaataatgagaatcaagacatgtgaag
cactgggagactgaaagagtagaactgcataatattctagtctcttagag
gcttaggttcttggtatactaaatactggagaccttaactgtcacagtac
tggttagtctaggagccagttgtccacttga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_16417279_16418424
seq2: B6Ng01-107G13.g_70_1200 (reverse)

seq1  TCAAGTGGACAAACTGACTTCTAGACTAGACCAGTACTGTGACAGTTACA  50
      |||||||||| ||||| || |||||||| ||||||||||||||||||| |
seq2  TCAAGTGGAC-AACTGGCTCCTAGACTA-ACCAGTACTGTGACAGTTA-A  47

seq1  GGTTCTCCAGTAATTTTAGGTAATACAAGGAACCTAAAGCCTCTAGAGAG  100
      || |||||||||  |||||   |||| | |||||| ||||||||| ||||
seq2  GG-TCTCCAGTA--TTTAG--TATACCAAGAACCT-AAGCCTCTA-AGAG  90

seq1  ACTAGAATATTTATGCAGTTCTACTTCTTTCAGTCTCCCAGTGCTTTCAA  150
      ||||||||| |||||||||||||| |||||||||||||||||||||   |
seq2  ACTAGAATA-TTATGCAGTTCTAC-TCTTTCAGTCTCCCAGTGCTT--CA  136

seq1  CATTGTCTTTGATTCTCATTATTTTTTGCAGTC-TCTGGTTTAGCCTGTT  199
      || |||| ||||||||||||| ||||||||||| ||||| ||||||||||
seq2  CA-TGTC-TTGATTCTCATTA-TTTTTGCAGTCTTCTGG-TTAGCCTGTT  182

seq1  TCTAGTTTGGATGTTCCAAATGTTACCTGTAG-ACTAGATTGTGAGTGGC  248
      ||||||||||||||||| |||||||||||||| |||||||||||||||||
seq2  TCTAGTTTGGATGTTCCCAATGTTACCTGTAGAACTAGATTGTGAGTGGC  232

seq1  ATCTCCCAGGGGATCACCGAATGCCTAATTCT-AAGTCCAGTTTGGATAT  297
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ATCTCCCAGGGGATCACCGAATGCCTAATTCTAAAGTCCAGTTTGGATAT  282

seq1  GGTGAGTCAGACCTGCATTTTGACACCCACACTTTTTCTTTGAAGGATGT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGTCAGACCTGCATTTTGACACCCACACTTTTTCTTTGAAGGATGT  332

seq1  AGGTGCCTAATTGAGAAATGAATTCTAGATTTTTCTGAGTACCTCACCTA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGCCTAATTGAGAAATGAATTCTAGATTTTTCTGAGTACCTCACCTA  382

seq1  GGTAGGCAATCATTCCAGTTAATCCCCATGTGTTTACATTGTAAAAGGAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGGCAATCATTCCAGTTAATCCCCATGTGTTTACATTGTAAAAGGAA  432

seq1  AAATTAACTATCAGGTAATAAATTAGCTTTTGTGCCATGGTCTAGCAGTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAACTATCAGGTAATAAATTAGCTTTTGTGCCATGGTCTAGCAGTT  482

seq1  TGTTCAAACCCTTCATATTCGTATGGGTTATCAATTTTATCAGGCAAGAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCAAACCCTTCATATTCGTATGGGTTATCAATTTTATCAGGCAAGAA  532

seq1  AAGCAAACAATACCAGTTTGAGCCTCTCATGTGTACCTCCTATGTTGGTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAACAATACCAGTTTGAGCCTCTCATGTGTACCTCCTATGTTGGTT  582

seq1  GCATTTGCATTCCAAACAAATCTCGCTTCTAGTTATTTCTAACTTCTACC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTGCATTCCAAACAAATCTCGCTTCTAGTTATTTCTAACTTCTACC  632

seq1  ATTTTTTTTCCATCTTCACATTGGATGTTATAAGCCAAAGTGGATGACAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTTCCATCTTCACATTGGATGTTATAAGCCAAAGTGGATGACAA  682

seq1  TGGATTGGAGTGGATGTTAAATAAATAAATATCAGCCTCACAGAAAGAGA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTGGAGTGGATGTTAAATAAATAAATATCAGCCTCACAGAAAGAGA  732

seq1  ATAATGAAACTGAATGTCCCCTTAGCTTTTCTGTGGATGCTGTAATGGAT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGAAACTGAATGTCCCCTTAGCTTTTCTGTGGATGCTGTAATGGAT  782

seq1  TCTGATGTCAGAATCCTTGGGCTGAGGGATCAACCTATGATTGGCTGAAG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATGTCAGAATCCTTGGGCTGAGGGATCAACCTATGATTGGCTGAAG  832

seq1  GTGGGGGCCTGGTGGGACACGGAAGTTTGTAGGTGACTCCCTTTGATTCG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGGCCTGGTGGGACACGGAAGTTTGTAGGTGACTCCCTTTGATTCG  882

seq1  GAAATTGGAGCAATGAGGTTGCTCTGTGTTACTGAAGGACTACTGTGGGA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTGGAGCAATGAGGTTGCTCTGTGTTACTGAAGGACTACTGTGGGA  932

seq1  AATAGTAGTACATAATAAAAATGCTTTTCAAAGGAGTACATGCAAATTAG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTAGTACATAATAAAAATGCTTTTCAAAGGAGTACATGCAAATTAG  982

seq1  GAGTTAATGTAAGGTCCCAAAGATATATGCCAGTCTTTTCCATTTTGAAA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTAATGTAAGGTCCCAAAGATATATGCCAGTCTTTTCCATTTTGAAA  1032

seq1  ATCAGACAAAACCAATATCCATGCACCATTATATGTGTTTTTGTACTTTA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGACAAAACCAATATCCATGCACCATTATATGTGTTTTTGTACTTTA  1082

seq1  TGTGTTTTTTGAAATTGCCCTTTGTCTCCAGAGACAGGAAAGAGAATTC  1146
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTTTTGAAATTGCCCTTTGTCTCCAGAGACAGGAAAGAGAATTC  1131