BAC Information

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BAC

Clone NameB6Ng01-107G20
Chromosome2 (Build37)
Map Location 93,738,036 - 93,924,837
singlet/doubletdoublet
Overlap geneGm1335, LOC620695, Alkbh3, Hsd17b12
Upstream geneSyt13, LOC100042784, Trp53i11, C230071H18Rik, Tspan18, LOC100042789, LOC639658, Cd82, Alx4, Ext2, 2610203E10Rik, Gm1967
Downstream geneE530001K10Rik, Ttc17, Itpa-ps1, Api5, LOC100043259
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107G20.bB6Ng01-107G20.g
ACCDH914899DH914900
length167741
definitionDH914899|Mus musculus domesticus DNA, BAC clone: B6Ng01-107G20, 5' end.DH914900|Mus musculus domesticus DNA, BAC clone: B6Ng01-107G20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(93,738,036 - 93,738,202)(93,924,097 - 93,924,837)
sequence
tgggggacaactcctaggtgaaggcctagataaactttcctttcaaaggg
aagtatttcaaatgagttgagtctttgatgagcagagcctacccacttcc
tgagacatcctcaaggcctctttcctagtctgttaatgtctaaatgcata
gcactatgtgtgtatgt
gaattcttttgaattatcctaagttccaaggaagagcatccttagcctgt
tgtggtagaggagggagaggcctagcatttgtgaagtgcctcctgtaccc
gtggtcatcacctgagcctaaacctaagctgggtaatagttacttcgttg
tcacaagaacatgctgaggcttctacatgatgtctgtcttgctcatggcc
attctataaagaaggatgaaaatgagattagcacctatgtctgggtgacc
tcaaatcccacacttttcaaagggtggaaggtggaagtggccattgtatg
ctgaccgtggagagagtggctcccccggttcttccctcagaagctcttac
ttccctccccagctctttggaccttaatagtcttgagaaaaggagagcat
caaggtctttcccatgtcactttgtgtatttattactgtgcactttgtgt
ggctctttaaatgcagtgacttaactgttaaccaggctagaaactgcagt
gagatcacattccacattcatttttaccatgatgaattttgtttctttta
atgtatcacacactttacaacagctaagagcattggctgctcttccagag
gacatggactcaatgcctagcatccacatggcaactcacagctgtctcta
actccactgccaggtgatctggcatcctcatacagacacacatgaaggca
aaacagcagtgcacatcctaaataggaaggggggggggttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_93738036_93738202
seq2: B6Ng01-107G20.b_51_217

seq1  TGGGGGACAACTCCTAGGTGAAGGCCTAGATAAACTTTCCTTTCAAAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGACAACTCCTAGGTGAAGGCCTAGATAAACTTTCCTTTCAAAGGG  50

seq1  AAGTATTTCAAATGAGTTGAGTCTTTGATGAGCAGAGCCTACCCACTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATTTCAAATGAGTTGAGTCTTTGATGAGCAGAGCCTACCCACTTCC  100

seq1  TGAGACATCCTCAAGGCCTCTTTCCTAGTCTGTTAATGTCTAAATGCATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACATCCTCAAGGCCTCTTTCCTAGTCTGTTAATGTCTAAATGCATA  150

seq1  GCACTATGTGTGTATGT  167
      |||||||||||||||||
seq2  GCACTATGTGTGTATGT  167

seq1: chr2_93924097_93924837
seq2: B6Ng01-107G20.g_67_807 (reverse)

seq1  ACACCCCCCCCCCTTCCTATTTAGGATGTGCACTGCTGTTTTGCCTTCAT  50
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCCCCCCCCTTCCTATTTAGGATGTGCACTGCTGTTTTGCCTTCAT  50

seq1  GTGTGTCTGTATGAGGATGCCAGATCACCTGGCAGTGGAGTTAGAGACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTCTGTATGAGGATGCCAGATCACCTGGCAGTGGAGTTAGAGACAG  100

seq1  CTGTGAGTTGCCATGTGGATGCTAGGCATTGAGTCCATGTCCTCTGGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAGTTGCCATGTGGATGCTAGGCATTGAGTCCATGTCCTCTGGAAG  150

seq1  AGCAGCCAATGCTCTTAGCTGTTGTAAAGTGTGTGATACATTAAAAGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCCAATGCTCTTAGCTGTTGTAAAGTGTGTGATACATTAAAAGAAA  200

seq1  CAAAATTCATCATGGTAAAAATGAATGTGGAATGTGATCTCACTGCAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATTCATCATGGTAAAAATGAATGTGGAATGTGATCTCACTGCAGTT  250

seq1  TCTAGCCTGGTTAACAGTTAAGTCACTGCATTTAAAGAGCCACACAAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCCTGGTTAACAGTTAAGTCACTGCATTTAAAGAGCCACACAAAGT  300

seq1  GCACAGTAATAAATACACAAAGTGACATGGGAAAGACCTTGATGCTCTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGTAATAAATACACAAAGTGACATGGGAAAGACCTTGATGCTCTCC  350

seq1  TTTTCTCAAGACTATTAAGGTCCAAAGAGCTGGGGAGGGAAGTAAGAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCAAGACTATTAAGGTCCAAAGAGCTGGGGAGGGAAGTAAGAGCT  400

seq1  TCTGAGGGAAGAACCGGGGGAGCCACTCTCTCCACGGTCAGCATACAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGGGAAGAACCGGGGGAGCCACTCTCTCCACGGTCAGCATACAATG  450

seq1  GCCACTTCCACCTTCCACCCTTTGAAAAGTGTGGGATTTGAGGTCACCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTTCCACCTTCCACCCTTTGAAAAGTGTGGGATTTGAGGTCACCCA  500

seq1  GACATAGGTGCTAATCTCATTTTCATCCTTCTTTATAGAATGGCCATGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATAGGTGCTAATCTCATTTTCATCCTTCTTTATAGAATGGCCATGAG  550

seq1  CAAGACAGACATCATGTAGAAGCCTCAGCATGTTCTTGTGACAACGAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACAGACATCATGTAGAAGCCTCAGCATGTTCTTGTGACAACGAAGT  600

seq1  AACTATTACCCAGCTTAGGTTTAGGCTCAGGTGATGACCACGGGTACAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATTACCCAGCTTAGGTTTAGGCTCAGGTGATGACCACGGGTACAGG  650

seq1  AGGCACTTCACAAATGCTAGGCCTCTCCCTCCTCTACCACAACAGGCTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACTTCACAAATGCTAGGCCTCTCCCTCCTCTACCACAACAGGCTAA  700

seq1  GGATGCTCTTCCTTGGAACTTAGGATAATTCAAAAGAATTC  741
      |||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCTCTTCCTTGGAACTTAGGATAATTCAAAAGAATTC  741