BAC Information

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BAC

Clone NameB6Ng01-110M20
Chromosome2 (Build37)
Map Location 36,124,006 - 36,125,097
singlet/doubletsinglet
Overlap genenone
Upstream geneGsn, Stom, LOC654354, 4930568D16Rik, 4930402F06Rik, Ggta1, LOC666042, LOC100042194, Dab2ip, Ttll11, Ndufa8, 1700010A17Rik, Lhx6, Rbm18, LOC100042236, Mrrf, LOC100040493, Ptgs1
Downstream geneOlfr334-ps1, Olfr335, Olfr336-ps1, Olfr337-ps1, Olfr338, LOC675440, Olfr339, Olfr340, Olfr341, Olfr342, Olfr343-ps1, Olfr344, Olfr345, Olfr346, Olfr347, Olfr348, Olfr50, Rpl18p, Olfr3, Olfr349-ps1, Olfr350, Olfr351, Olfr352, Olfr353, Olfr354, Olfr355, Olfr356, Olfr357, Olfr358, Olfr359-ps1, Olfr360, Olfr361, Olfr362, Olfr364-ps1, Olfr365, Olfr366
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-110M20.bB6Ng01-110M20.g
ACCDH917323DH917324
length1,1401,106
definitionDH917323|Mus musculus domesticus DNA, BAC clone: B6Ng01-110M20, 5' end.DH917324|Mus musculus domesticus DNA, BAC clone: B6Ng01-110M20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagaaccaccagcttagggatggtactacccacaatgaattgagc
tctcctccattgattaataattaagaacgtgtcttacagcttgatctttt
ggaattgttttctcaattgaggctctttcttctctgatgactctgatgac
tctagcttgagtcaagttgacataaaaccagccagtacagatggaatgca
ttttttgtattatgatatgaggacaagcctatggagtacaatgtagtggt
tgaataaaaatacacactggttgaaaggattagagtattggggtaggtgt
aatcttgttggtggaagtgtattactaatggtgggctttgaagtttcaaa
agtctcatgccaagtccagtgtatgcctctctgcttgtagatccagatgt
aaaattctcaactacttctcttgaatcatgtctgcttacatgccaccatg
ctcctcaccatgataataatagactaaacctaggaaactataagcaagct
acaattaaatgcttttctttataagccttaccttggtcatggtatctctt
cacagcaacagaacagataggtataagagattcacttattttatcttgct
aatgtttctttctttccttcttttctttctttctttccttcttttctttc
tttctttccttcttttctttctttctttctttcttctttctttctttctt
tctttctttctttctttctttctttctttctttctttctttctttctttc
tgtccaagaccaattgtcacttaactggagtggacagtggtgggccttca
gagtttctgcccattccttgtaaaaattattttcagttttaaaatgctga
tcataaatatccttacagagaaatgcaggaggataaaagtagtccaagta
ccatttgtgagtgggaaagaccactttacagaatccataaatgttatatg
aaacatcagttccagggacttatttgtgccagagcggcccagccctcctc
cacccccaacattatactgctgatgcctggtgtgcccaactggatgaaat
tccctacctgccaatgcacgaccagcctcccaaggtatgtgaattgagaa
ttccggactcggagagctgaactcattgccccccctcccc
gaattcagtaggaattcagtaagaaggttacctattcagtaacattcaaa
tttacttctagtagagacagtgaaactaattaggcattacaaagaacaga
gccagaatagctcagggctggtctgcagtgtttacttgagacaatagcca
gtcttacccagagaagggaattcacaatggcctagtgaataggtgggttt
accatgaaagagttagggaattcccctgagacaggtttcttcactaggcc
caaagaaatcaggcatttactaagaaaccctggtggtgggcttaacaata
gactaacattacacctggctctcttcttagtggcagcagcctggtcccac
cttcttttgatgtatacattccttaagttttgtgtcactgtaactcattg
gatgtatctcgcctggtttcttgttattgttctgtataaaaagttcgatg
ctcgacttgacaaattacattcagattctacacaacctcttgtgttgcgt
ctatttgtcatttgccaactccttgtccatctgcaaccagagacccatcc
tacccagacaagggaccaagagggtctgcggcaaggagtaaacagtaaaa
aataatcaaactctggactgaaatcaacaaagtagaaacaaagagaccaa
tacaaagaatcatggaaacaaagagttgggttttaaggtcccaggaatca
atgaagaaagacgcaagactcaaaagtatgcaaaagtaagagcatttatt
ctgcagaaacaaacaatatgcaagagtcagccatttattcaaaattgcaa
cctcaaaataagcttgcaggctgcatttagttcacctaggaaatttttca
ggatggtagttcattttgatatgattagataagtaacagcatatattagt
gcatttgtatttgtcatatattgtttaatcattttgtctgtcttagagag
ttcaggtactgtctcagtctggactggtatcactctcagctaaacaggac
aattctgatatggctattcctctctggttggtgattgtggtgtgggtggg
tttctcaaagaagccctcgctggctcctgaaaggctcaatcaccctgatt
gagcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_36124006_36125097
seq2: B6Ng01-110M20.b_115_1188

seq1  ATAATTAAGAACGTGTCTTACAGCTTGATCTTTTGGAATTGTTTTCTCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTAAGAACGTGTCTTACAGCTTGATCTTTTGGAATTGTTTTCTCAA  50

seq1  TTGAGGCTCTTTCTTCTCTGATGACTCTGATGACTCTAGCTTGAGTCAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGCTCTTTCTTCTCTGATGACTCTGATGACTCTAGCTTGAGTCAAG  100

seq1  TTGACATAAAACCAGCCAGTACAGATGGAATGCATTTTTTGTATTATGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACATAAAACCAGCCAGTACAGATGGAATGCATTTTTTGTATTATGAT  150

seq1  ATGAGGACAAGCCTATGGAGTACAATGTAGTGGTTGAATAAAAATACACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGACAAGCCTATGGAGTACAATGTAGTGGTTGAATAAAAATACACA  200

seq1  CTGGTTGAAAGGATTAGAGTATTGGGGTAGGTGTAATCTTGTTGGTGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTGAAAGGATTAGAGTATTGGGGTAGGTGTAATCTTGTTGGTGGAA  250

seq1  GTGTATTACTAATGGTGGGCTTTGAAGTTTCAAAAGTCTCATGCCAAGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATTACTAATGGTGGGCTTTGAAGTTTCAAAAGTCTCATGCCAAGTC  300

seq1  CAGTGTATGCCTCTCTGCTTGTAGATCCAGATGTAAAATTCTCAACTACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTATGCCTCTCTGCTTGTAGATCCAGATGTAAAATTCTCAACTACT  350

seq1  TCTCTTGAATCATGTCTGCTTACATGCCACCATGCTCCTCACCATGATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTGAATCATGTCTGCTTACATGCCACCATGCTCCTCACCATGATAA  400

seq1  TAATAGACTAAACCTAGGAAACTATAAGCAAGCTACAATTAAATGCTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGACTAAACCTAGGAAACTATAAGCAAGCTACAATTAAATGCTTTT  450

seq1  CTTTATAAGCCTTACCTTGGTCATGGTATCTCTTCACAGCAACAGAACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATAAGCCTTACCTTGGTCATGGTATCTCTTCACAGCAACAGAACAG  500

seq1  ATAGGTATAAGAGATTCACTTATTTTATCTTGCTAATGTTTCTTTCTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGTATAAGAGATTCACTTATTTTATCTTGCTAATGTTTCTTTCTTTC  550

seq1  CTTCTTTTCTTTCTTTCTTTCCTTCTTTTCTTTCTTTCTTTCCTTCTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTTTCTTTCTTTCTTTCCTTCTTTTCTTTCTTTCTTTCCTTCTTTT  600

seq1  CTTTCTTTCTTTCT---TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT  647
      ||||||||||||||   |||||||||||||||||||||||||||||||||
seq2  CTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT  650

seq1  TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTGTCCAAGACCAATTG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTGTCCAAGACCAATTG  700

seq1  TCACTTAACTGGAGTGGACAGTGGTGGGCCTTCAGAGTTTCTGCCCATTC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTAACTGGAGTGGACAGTGGTGGGCCTTCAGAGTTTCTGCCCATTC  750

seq1  TTTGTAAAAATTATTTTCAGTTTTAAAATGCTGATCATTAAATAT-CTTA  796
       |||||||||||||||||||||||||||||||||||| ||||||| ||||
seq2  CTTGTAAAAATTATTTTCAGTTTTAAAATGCTGATCA-TAAATATCCTTA  799

seq1  CAGAGAAATGCAAGGAGGATAAAAAGTAGTCCAAGTACCATTTGTGAGTG  846
      ||||||||||| |||||||| |||||||||||||||||||||||||||||
seq2  CAGAGAAATGC-AGGAGGAT-AAAAGTAGTCCAAGTACCATTTGTGAGTG  847

seq1  GGAAAGAACACTTTACAGAATCCATAAAATTGTTATATGAAAACATCAGT  896
      ||||||| ||||||||||||||||||||  ||||||||| ||||||||||
seq2  GGAAAGACCACTTTACAGAATCCATAAA--TGTTATATG-AAACATCAGT  894

seq1  TCCAGGGGACTTATTTGTTGGCCAGAGCGGCCCCAGCCCTCCT-CACCCC  945
      |||| |||||||||||||  |||||||||| |||||||||||| ||||||
seq2  TCCA-GGGACTTATTTGT--GCCAGAGCGG-CCCAGCCCTCCTCCACCCC  940

seq1  CAACATTATACTGCTGATG-CTTGTGTGCCAAAACTTGATGAAAATCCCT  994
      ||||||||||||||||||| || |||||||  |||| ||||||| |||||
seq2  CAACATTATACTGCTGATGCCTGGTGTGCC-CAACTGGATGAAATTCCCT  989

seq1  A-CTGCAGAATGCACGACAAGCTTCCAAAGTTATGTAAATATTTGAGGAT  1043
      | ||||  |||||||||| ||| ||| ||| ||||| ||   |||||   
seq2  ACCTGC-CAATGCACGACCAGCCTCCCAAGGTATGTGAA---TTGAG--A  1033

seq1  ATTCCCAGGATCTGGAGAGCTAGGACTTCATTTCTGCCCCCCCCTCCCC  1092
      |||||  |||   ||||||||  ||  |||||     ||||||||||||
seq2  ATTCC--GGACTCGGAGAGCT--GAACTCATT----GCCCCCCCTCCCC  1074