BAC Information

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BAC

Clone NameB6Ng01-112B05
Chromosome2 (Build37)2 (Build37)
Map Location 142,776,564 - 142,777,22094,797,292 - 94,798,431
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-112B05.bB6Ng01-112B05.g
ACCDH918241DH918242
length1,0181,134
definitionDH918241|Mus musculus domesticus DNA, BAC clone: B6Ng01-112B05, 5' end.DH918242|Mus musculus domesticus DNA, BAC clone: B6Ng01-112B05, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(142,776,564 - 142,777,220)(94,797,292 - 94,798,431)
sequence
gaattctttgtttagttctgagccccatgttttaatggggttattcgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccctac
tttctcctctataagtttcagtgtctctggttttatgtgaaattccttga
tccacttagatttgaccttagtacaaggagataagtatggatcaattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccatagatgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaatggc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctataagatggccattttttaattttttt
attagatattttcttcatttacatttcaaatgctatcccaaaagtcccct
ataccctccccctgccctgctccccaacccacacactccggcttccttgc
tctggcattccactgtactggggcatatgatcttcgcaataccaatggcc
tctcctcccattgatggctgaataggccatcctctgctacatatgcacta
gagacaaagttctgtggggtactagttagttcatattgtcgatcctccta
tagggttgagacccttttagctccttcatactttcctctagcttctattt
aggggccctggtgttcat
gaattccacgacagccaaggacaaacagagaaacattgtcttaaagaagc
aaaacaaacaaaaaacaaagtttcctttatttttgcatttgtgtacatgg
acattgtatgcatgcatgcacatatgttcatgtgtatgaacctgtgcatg
caggcatgtaacccttgagtatatgtatgaaggccaggggctgattatgt
gtcttattttatcattatccaccttagttttgagaccaggtctcaaaaat
acactgaacctggaacttgtctttttgggtagtctgtctggccagcaggc
tgtggagatcttcttgtttctgcttcccagtgtgggagatctaaggcaca
ggctgcccttccccccattttgcttgggtgatgagcagcctacacaggca
ctcatacctatgcagcaagcacttcactcactgagccatcttctcacgcc
cacttctgaatatgctcatagggatgggtaaaacttattagaattcatac
cctactgtccgcagagagacaatttacatgttatgtggcactagctcaga
catgcttctcctgattcatctgaagggcattgaaggggagtcacagcctt
taatattcctccacagtctcgctgcttgttcaggtggctttatggtctca
ttttggcctggctaccttccagaaggatttactccagtgtttctggaaag
gtcactgtgaggctgaggtgaaggcgggctcaaggtccaaaacaggattt
ctactagttggagaaggtagctgaaggaactgaaagggccaatgcctagg
ctaagtgctgccccatctctctggtggctgctgtagcagtcattgctaat
tgattttttggctgcatttgcatacagtctcagcaatactgtcacatcac
tcttgtcacagttgagttataatcaactgaccacagtcatcactcagttg
aagactattacttcccactctggaaaatggagcatgcacagcataaggat
gtgcttagctgaagcaggtcttgtgcacagggtgtgacacatgttatcag
atcccattcagtttctgttaccatctcagctgcccagggaactgttccct
ttctctggctgtgtcaagttctctgtattgcctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776564_142777220
seq2: B6Ng01-112B05.b_66_722 (reverse)

seq1  ATAGCAAAAAGTCTTCTCAAGGATAAAAGAACCTCTGGTGGAATCACCAT  50
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ATAGCAAAAACTCTTCTCAAGGATAAAAGAACCTCTGGTGGAATCACCAT  50

seq1  GCCTGACCTAAAGCTTTACTACAGAGCAATTGTGATAAAAACTGCATGGT  100
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GCCTGACCTAAAGCTTTACTACAGAGCCATTGTGATAAAAACTGCATGGT  100

seq1  ACTGGTATAGAGACAGACAAGTAGACCAATGGAATAGAATTGAAGACCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTATAGAGACAGACAAGTAGACCAATGGAATAGAATTGAAGACCCA  150

seq1  GAAATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAA  200
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GAAATGAACCCACACATCTATGGTCACTTGATCTTCGACAAGGGAGCTAA  200

seq1  AACCATCCAGAGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACA  250
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACA  250

seq1  ACTGGTTGTTATCATGTAGAAGAATGGGAATCGATCCATACTTATCTCCT  300
      |||||||||||||||||||||||||| |||| ||||||||||||||||||
seq2  ACTGGTTGTTATCATGTAGAAGAATGCGAATTGATCCATACTTATCTCCT  300

seq1  TGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGA  350
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TGTACTAAGGTCAAATCTAAGTGGATCAAGGAATTTCACATAAAACCAGA  350

seq1  GACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGG  400
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GACACTGAAACTTATAGAGGAGAAAGTAGGGAAAAGCCTTGAAGATATGG  400

seq1  GCACAGGGGACAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGA  450
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GCACAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGA  450

seq1  TCGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGC  500

seq1  AAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGA  550

seq1  TCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAA  600

seq1  GAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAAATG  650
      ||||||||||||||||||||||||||||| |||||||||||||||| |||
seq2  GAACTCAAGAAGGTGGACTTCAGAAAATCGAATAACCCCATTAAAACATG  650

seq1  GGGCTCA  657
      |||||||
seq2  GGGCTCA  657

seq1: chr2_94797292_94798431
seq2: B6Ng01-112B05.g_70_1203

seq1  GAATTCCACGACAGCCAAGGACAAACAGAGAAACATTGTCTTAAAGAAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACGACAGCCAAGGACAAACAGAGAAACATTGTCTTAAAGAAGC  50

seq1  AAAACAAACAAAAAACAAAGTTTCCTTTATTTTTGCATTTGTGTACATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAACAAAAAACAAAGTTTCCTTTATTTTTGCATTTGTGTACATGG  100

seq1  ACATTGTATGCATGCATGCACATATGTTCATGTGTATGAACCTGTGCATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGTATGCATGCATGCACATATGTTCATGTGTATGAACCTGTGCATG  150

seq1  CAGGCATGTAACCCTTGAGTATATGTATGAAGGCCAGGGGCTGATTATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCATGTAACCCTTGAGTATATGTATGAAGGCCAGGGGCTGATTATGT  200

seq1  GTCTTATTTTATCATTATCCACCTTAGTTTTGAGACCAGGTCTCAAAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTATTTTATCATTATCCACCTTAGTTTTGAGACCAGGTCTCAAAAAT  250

seq1  ACACTGAACCTGGAACTTGTCTTTTTGGGTAGTCTGTCTGGCCAGCAGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGAACCTGGAACTTGTCTTTTTGGGTAGTCTGTCTGGCCAGCAGGC  300

seq1  TGTGGAGATCTTCTTGTTTCTGCTTCCCAGTGTGGGAGATCTAAGGCACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAGATCTTCTTGTTTCTGCTTCCCAGTGTGGGAGATCTAAGGCACA  350

seq1  GGCTGCCCTTCCCCCCATTTTGCTTGGGTGATGAGCAGCCTACACAGGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCCCTTCCCCCCATTTTGCTTGGGTGATGAGCAGCCTACACAGGCA  400

seq1  CTCATACCTATGCAGCAAGCACTTCACTCACTGAGCCATCTTCTCACGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATACCTATGCAGCAAGCACTTCACTCACTGAGCCATCTTCTCACGCC  450

seq1  CACTTCTGAATATGCTCATAGGGATGGGTAAAACTTATTAGAATTCATAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCTGAATATGCTCATAGGGATGGGTAAAACTTATTAGAATTCATAC  500

seq1  CCTACTGTCCGCAGAGAGACAATTTACATGTTATGTGGCACTAGCTCAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTGTCCGCAGAGAGACAATTTACATGTTATGTGGCACTAGCTCAGA  550

seq1  CATGCTTCTCCTGATTCATCTGAAGGGCATTGAAGGGGAGTCACAGCCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTTCTCCTGATTCATCTGAAGGGCATTGAAGGGGAGTCACAGCCTT  600

seq1  TAATATTCCTCCACAGTCTCGCTGCTTGTTCAGGTGGCTTTATGGTCTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATTCCTCCACAGTCTCGCTGCTTGTTCAGGTGGCTTTATGGTCTCA  650

seq1  TTTTGGCCTGGCTACCTTCCAGAAGGATTTACTCCAGTGTTTCTGGAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGCCTGGCTACCTTCCAGAAGGATTTACTCCAGTGTTTCTGGAAAG  700

seq1  GTCACTGTGAGGCTGAGGTGAAGGCGGGCTCAAGGTCCAAAACAGGATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACTGTGAGGCTGAGGTGAAGGCGGGCTCAAGGTCCAAAACAGGATTT  750

seq1  CTACTAGTTGGAGAAGGTAGCTGAAGGAACTGAAAGGGCCAATGCCTAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTAGTTGGAGAAGGTAGCTGAAGGAACTGAAAGGGCCAATGCCTAGG  800

seq1  CTAAGTGCTGCCCCATCTCTCTGGTGGCTGCTGTAGCAGTCATTGCTAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTGCTGCCCCATCTCTCTGGTGGCTGCTGTAGCAGTCATTGCTAAT  850

seq1  TGATTTTTTGGCTGCATTTGCATACAGTCTCAGCAATACTGTCACATCAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTTTGGCTGCATTTGCATACAGTCTCAGCAATACTGTCACATCAC  900

seq1  TCTTGTCACAGTTGAGTTATAATCAACTGACCACAGTCATCACTCAGTTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTCACAGTTGAGTTATAATCAACTGACCACAGTCATCACTCAGTTG  950

seq1  AAGACTATTACTTCCCACTCTGGAAAATAGAGCATGCACAGCATAAGGAT  1000
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AAGACTATTACTTCCCACTCTGGAAAATGGAGCATGCACAGCATAAGGAT  1000

seq1  GTGCTTAGCTGAAGCAGGGTCTGTGCACAGGGTGTGACACCATGTTATCA  1050
      ||||||||||||||||||   |||||||||||||||||| ||||||||||
seq2  GTGCTTAGCTGAAGCAGGTCTTGTGCACAGGGTGTGACA-CATGTTATCA  1049

seq1  GATCCCATTTCAGTTTCTGTTACCATCTCAGGCTGCCCATGATACTGGTC  1100
      ||||||| |||||||||||||||||||||| |||||||| |  |||| ||
seq2  GATCCCA-TTCAGTTTCTGTTACCATCTCA-GCTGCCCAGGGAACTGTTC  1097

seq1  CCTTTTCTCTGCCTGTGTTCCAGTTTCTCTGTATTGCCTT  1140
      || |||||||| ||||||  ||  ||||||||||||||||
seq2  CC-TTTCTCTGGCTGTGT--CAAGTTCTCTGTATTGCCTT  1134