BAC Information

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BAC

Clone NameB6Ng01-113C08
Chromosome2 (Build37)
Map Location 48,919,170 - 48,920,257
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC383691, LOC100041457, LOC383692, Acvr2a, Orc4l, LOC100041508
Downstream geneMbd5, LOC100042719, LOC666709, LOC435666, Epc2, Kif5c, 2310010M24Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113C08.bB6Ng01-113C08.g
ACCDH919016DH919017
length1,0911,086
definitionDH919016|Mus musculus domesticus DNA, BAC clone: B6Ng01-113C08, 5' end.DH919017|Mus musculus domesticus DNA, BAC clone: B6Ng01-113C08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacttcaaataattatatttttctaaaatttttgatcaaagaact
attttctattaacataccagtatgaaaacacattgtggtacaatataagg
tgcaactataacttaaaagttaagcctccctttgggtctattactcatct
tgagaaccagagagatgacttagtgttttttttttctttttaaattagat
agtttatttatatttcaaatgttatcccctttcctagtttcccctctgaa
aatcccctatcctcccatcactcgctccccagtccacccactcccacttc
ctggctcaggcattcccctatactggggcatagaaccttcacaggaccaa
ggtcctctccttccattgatggccgactaggccatccttttctacatatg
caactagagccacaagtctctccatatgttttctttgattggtggtttag
tctccttgggcactttctctagctccttcattagggaccctgtactccat
ctaatggatgagtgtgagcatcaacttctgtattagtcaggtactggtag
agcttctcaggagacagctatatccgtctcctgtcagcaagctcttgttg
gcatctgcaatagtgtcaggttttggtggttgtttatgggatggattccc
aggtggggcagtctctggatggtcattctttcaggccctgctccgaactt
tgtctctataactccttccatgggtattttgttcccccttctaagaagga
tcaaagtgtccacagtttggtcttccttcttcttgagttttatgtgtttt
tgcaaattgtatcttgggtattctgagcttccggggctaaaatctactat
cagtgagtgcatatcatgtgtattcttttgtgattgggttacctcactta
gggtgatatccttcagatccatccagttgtctaacaatttcatgaattca
ttgtttttaatagctgaaaagtactctgaagattgctttgacagatggcc
atttttactacactaattcagccaatccagaaatgggtaatctttccctc
ttctgaaggtcttctgaaaattctttcttcaaaaatttcag
gaattccaatttttataagaatgaattttcatttttaaaggaaatctaca
ttggtctatatcccttagaatatacaaatagtctaagcatttaaaagagt
aaccttaaatattaaataataagttgatacattttctgggaaagaatatg
ttgcttcaattttctaatgcatttttggttacaaatggtttttggtaggg
gatgcattgcttttcatctgcttgtcactgaagactactgcactcaatgc
ccacataaatacttttaatgtatgacctttgattcatctttaccatacag
aatttagaagccaaacttgagctttaattttgaccatatgatctcttcag
atgaaatgagatatagaagttaaatgagaataattatgctatgtggctaa
aaataaatgtgataatttgttgagtataatgtctggcacatgaaaatatt
caaatattcaaaactgttactagtggatttagcaagagaaattttttttt
tgcaattaatagtgtttctattgtgtctacttgaaggctttatttttcta
gagcttaaaactttattcaaaaattgtgactgtaataaaatgtgcataga
ttatctataaatttcatctgttacatttatcacttattaaaaaagaaatt
ctttaaaccttcaatagagattaattttcagtgaactatatccatatggc
aattttaaaatttaaaaatcatctttttaaatgttgaataggcataaaat
caagttatgttccttaaacagtaatactcataatttttttcatttgtgta
acataaaaatagctaactgctttgcttacagaaatgtttggaatatgact
aagcatgaaatacttgttaagaaaatctttgagatacttgatacatgaat
aaaggtgatatttcagtggtaattatagtgtatgttagctcctgaaggta
gggcattcaatttataaataattaagcatgcattaatttttagtatttgc
aagtttatttataactccctttttggctaattaatttgaaatatgtcttt
agaacacacacttgagctgttaagctggtactactg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_48919170_48920257
seq2: B6Ng01-113C08.g_69_1154

seq1  GAATTCCAATTTTTATAAGAATGAATTTTCATTTTTAAAGGAAATCTACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAATTTTTATAAGAATGAATTTTCATTTTTAAAGGAAATCTACA  50

seq1  TTGGTCTATATCCCTTAGAATATACAAATAGTCTAAGCATTTAAAAGAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCTATATCCCTTAGAATATACAAATAGTCTAAGCATTTAAAAGAGT  100

seq1  AACCTTAAATATTAAATAATAAGTTGATACATTTTCTGGGAAAGAATATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTAAATATTAAATAATAAGTTGATACATTTTCTGGGAAAGAATATG  150

seq1  TTGCTTCAATTTTCTAATGCATTTTTGGTTACAAATGGTTTTTGGTAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTCAATTTTCTAATGCATTTTTGGTTACAAATGGTTTTTGGTAGGG  200

seq1  GATGCATTGCTTTTCATCTGCTTGTCACTGAAGACTACTGCACTCAATGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCATTGCTTTTCATCTGCTTGTCACTGAAGACTACTGCACTCAATGC  250

seq1  CCACATAAATACTTTTAATGTATGACCTTTGATTCATCTTTACCATACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATAAATACTTTTAATGTATGACCTTTGATTCATCTTTACCATACAG  300

seq1  AATTTAGAAGCCAAACTTGAGCTTTAATTTTGACCATATGATCTCTTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAGAAGCCAAACTTGAGCTTTAATTTTGACCATATGATCTCTTCAG  350

seq1  ATGAAATGAGATATAGAAGTTAAATGAGAATAATTATGCTATGTGGCTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATGAGATATAGAAGTTAAATGAGAATAATTATGCTATGTGGCTAA  400

seq1  AAATAAATGTGATAATTTGTTGAGTATAATGTCTGGCACATGAAAATATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATGTGATAATTTGTTGAGTATAATGTCTGGCACATGAAAATATT  450

seq1  CAAATATTCAAAACTGTTACTAGTGGATTTAGCAAGAGAAATTTTTTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATATTCAAAACTGTTACTAGTGGATTTAGCAAGAGAAATTTTTTTTT  500

seq1  TGCAATTAATAGTGTTTCTATTGTGTCTACTTGAAGGCTTTATTTTTCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATTAATAGTGTTTCTATTGTGTCTACTTGAAGGCTTTATTTTTCTA  550

seq1  GAGCTTAAAACTTTATTCAAAAATTGTGACTGTAATAAAATGTGCATAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTTAAAACTTTATTCAAAAATTGTGACTGTAATAAAATGTGCATAGA  600

seq1  TTATCTATAAATTTCATCTGTTACATTTATCACTTATTAAAAAAGAAATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTATAAATTTCATCTGTTACATTTATCACTTATTAAAAAAGAAATT  650

seq1  CTTTAAACCTTCAATAGAGATTAATTTTCAGTGAACTATATCCATATGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAACCTTCAATAGAGATTAATTTTCAGTGAACTATATCCATATGGC  700

seq1  AATTTTAAAATTTAAAAATCATCTTTTTAAATGTTGAATAGGCATAAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTAAAATTTAAAAATCATCTTTTTAAATGTTGAATAGGCATAAAAT  750

seq1  CAAGTTATGTTCCTTAAACAGTAATACTCATAATTTTTTTCATTTGTGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTATGTTCCTTAAACAGTAATACTCATAATTTTTTTCATTTGTGTA  800

seq1  ACATAAAAATAGCTAACTGCTTTGCTTACAGAAATGTTTGGAATATGACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAAAATAGCTAACTGCTTTGCTTACAGAAATGTTTGGAATATGACT  850

seq1  AAGCATGAAATACTTGTTAAGAAAATCTTTGAGATACTTGATACATGAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATGAAATACTTGTTAAGAAAATCTTTGAGATACTTGATACATGAAT  900

seq1  AAAGGTGATATTTCAGTGGTAATTATAGTGTATGTTAGCTCCCTGAAGGT  950
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AAAGGTGATATTTCAGTGGTAATTATAGTGTATGTTAGCT-CCTGAAGGT  949

seq1  AGGGCATTCAATTTATTAATTAATTAAGCATGCATTAATTTTTAGTATTT  1000
      ||||||||||||||| ||| ||||||||||||||||||||||||||||||
seq2  AGGGCATTCAATTTA-TAAATAATTAAGCATGCATTAATTTTTAGTATTT  998

seq1  GCAAGTTTATTTATTACT-CATTTTTGTCTATTTAATTTGAAATTATGTC  1049
      |||||||||||||| ||| | |||||| ||| ||||||||||| ||||||
seq2  GCAAGTTTATTTATAACTCCCTTTTTGGCTAATTAATTTGAAA-TATGTC  1047

seq1  TTTTAGAACA-ACACTTTGAGCTGTT-AGCTGTTACTACTG  1088
       ||||||||| |||| |||||||||| ||||| ||||||||
seq2  -TTTAGAACACACAC-TTGAGCTGTTAAGCTGGTACTACTG  1086