BAC Information

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BAC

Clone NameB6Ng01-113L12
Chromosome2 (Build37)
Map Location 87,663,749 - 87,664,266
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr1094, Olfr1095, Olfr1096-ps1, Olfr1097, Olfr1098, Olfr1099, Olfr1100, Olfr1101, Olfr1102, Olfr1103-ps1, Olfr1104, Olfr1105, Olfr1106, Olfr1107, GA_x5J8B7W3Y5M-419033-418135, Olfr1109, Olfr259, LOC668402, Olfr1110, Olfr1111, Olfr1112, LOC228238, Olfr1113, Olfr1114-ps1, LOC546767, Olfr1115, Olfr1521-ps1, LOC100041923, Olfr1117-ps1, GA_x5J8B7TY7N2-4-429, LOC668424, Olfr1118, Olfr1119-ps1, Olfr1120, Olfr1121, Olfr1122, LOC668432, Olfr1123, Olfr1125, Olfr1126, Pramel7, Pramel6, LOC668439, Olfr1127-ps1, Olfr253-ps1, Olfr1128, LOC100042038, LOC668445, LOC668447, Olfr1129, Olfr1130, Olfr1131, Olfr1132, LOC100042076, Olfr1133, Olfr1134, Olfr1135, Olfr1136, Olfr1137, Olfr1138, GA_x5J8B7W3Y5M-1033291-1033773, Olfr1140, Olfr1141, Olfr152, Olfr1142-ps1, Olfr1143, GA_x5J8B7W3Y5M-1094074-1093275, Olfr1145, Olfr1146-ps1, Olfr1147-ps1
Downstream geneOlfr1148, Olfr1149-ps1, Olfr1150-ps1, Olfr1151, Olfr1152, Olfr1153, Olfr1154, Olfr1155, Olfr1156, Olfr1157, Olfr74, Olfr1158, Olfr1159-ps1, Olfr1160, Olfr1161, Olfr73, Olfr1162, Olfr1163, Olfr1164, Olfr1165, Olfr1166, Olfr1167, Olfr1168, Olfr1169-ps1, Olfr1170, Olfr1171-ps1, Olfr1172-ps1, Olfr1173, Olfr1174, Olfr1175, Olfr1176, Olfr1177, Olfr1178, Olfr1179, Olfr1180, Olfr1181, Olfr1182, Olfr1183, Olfr1184, Olfr1185-ps1, Olfr1186, Olfr1187-ps1, Olfr1188, LOC668528, Olfr1189, GA_x5J8B7W4NS2-37772-38277, Olfr475-ps1, Olfr526-ps1, Olfr1192-ps1, Olfr1193, Olfr1194-ps1, Olfr1195, Olfr1196, Olfr1197, Olfr1198, Olfr1199, Olfr1200, Olfr1201, Olfr1202
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113L12.bB6Ng01-113L12.g
ACCDH919440DH919441
length966993
definitionDH919440|Mus musculus domesticus DNA, BAC clone: B6Ng01-113L12, 5' end.DH919441|Mus musculus domesticus DNA, BAC clone: B6Ng01-113L12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaagaattgctctttctacccctatgaagaattgagttgaaattt
tgagggggattgcattgaatctatagattgttttcagcaagatggccatt
tttactatattaatccagacaatctatgagcatgagaaatctttccatct
tctttgatttctttcttcagagacttgaagttcttgtcaaacagatttct
tacttgcttgagtcacaccaaggtattttatattattttttattactgtg
aagggtgtcatttccttaattttattctgagtgtgtttatcctttgagta
gaagaaggctactaatttgtttgtcttaattttatatccagccactttgg
caaagttgtttatcaggtttaggagttctctggtggaatatttgggtcac
ttaaatatactatcatatcatctgcaaatagtgatattttgatttcttcc
tttccaatttgtatcttgttgtccttcttttgttgtctaattgttctgac
taggacttggagtactatatttaatagatagcaagagagggggcagtctt
gtctagtccctgattttaatagcattgcttcaagtttctctccatttagt
ttgatgttggctgctggctttctgtatattgcttttgctatgtttaggtg
tgggttttgaattactgatctttctaagactttttatcatgaagtggtat
tgaagtttgtcaaatgcttttcagcatctaatgagatgatcctgtggttg
ttaatttgagtttgtttatatagtgaattacatagttggatttccttata
ttgaatcatccccagatctctgggttgaagcctatatggtccttgattga
atgacggttttgatgttttcttgaattcagtttgcaagaattttattggg
tatttttgcatcaatattcataagtgaaattggtctgaagtcctctttgt
tgatcttgtgtggtta
gaattcattgtcctttgatagaaatgttatgtttaaatgtactgataact
cactgaactcctaaacctgataaacagctttggtgaagtagctggatata
aaattaactcaaacaagtcaatggcctttctctacacaaagaataaacag
gctgagaaagaaattagggaaacaacacccttctcaatagtcacaaataa
tataaaatatctcggcgtaactctaactaaggaagtaaaagatctgtatg
ataaaaacttcaagtctctgaagaaagaaattaaagaagatctcagaaga
tggaaagatctcccatgctcatggattggcaggatcaacattgtaaaaat
ggctatcttgccaaaagcaatctacagattcaatgcaatccccatcaaaa
ttccaactcaattcttcaacgaattagaaggagcaatttgcaaattcatc
tggaataacaaaaaacctaggatagcaaaaactcttctcaaggataaaag
aacctctggtggaatcaccatgcctgacctaaagctttactacagggcaa
ttgtgataaaaactgcatggtactggtatagagacagacaagtagaccaa
tggaatacaattgaagacccagaaatgaacccacacacctacggtcactt
gatcttcgacaagggagctaaaaccatccagtggaagaaagacagcattt
ttaacaattggtgctggcacaactggttgttatcatgtagaagaatgcga
atcgatccatacttatctccttgtactaaggtcaaatctaagtggatcaa
gggacttcacataaaaccagagacactgaaacttatagaggagaaagtag
ggaaaagccttgaagatatggggtacaggggaaatttcctgaacagacag
caatggccttgctctgtaagatcgagaattgacaaatgggacctatgaaa
ctccaaagtttcttgcaaggcaaagacaccgtcattagacaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_87663749_87664266
seq2: B6Ng01-113L12.g_105_496

seq1  AATGTACTGATAACTCACT-TATTATTAAATATTTTGTTCCCATATTGAA  49
      |||||||||||||||||||  | |  ||||          ||    ||| 
seq2  AATGTACTGATAACTCACTGAACTCCTAAA----------CC----TGAT  36

seq1  AAGACAATCATTTTTTATTTTGTAGTAATTTAAATCTTTTGTGCAGTTTA  99
      ||                             | | |||| ||| ||    
seq2  AA-----------------------------ACAGCTTTGGTGAAG----  53

seq1  TTCTGTTTAGCCTGTGTTCAGAAAGATTAACCACCTTCAATGAATCATCT  149
             ||||   ||   | ||| ||||||     ||||  ||      
seq2  -------TAGC---TGGATATAAA-ATTAAC-----TCAAACAA------  81

seq1  TTGAAAATCATATTTATCTTTAAGAAGAAAATTTTAATAATCTCTATTGT  199
        |  |||    ||| |||  |  |||||                     
seq2  --GTCAATGGCCTTTCTCTACACAAAGAA---------------------  108

seq1  TTTTTAAACATATGGGT-AGAATTTAAATTCAATGTAAATA-------TC  241
          ||||||   || | ||||   |||||  | | ||| |       ||
seq2  ----TAAACA---GGCTGAGAA-AGAAATT--AGGGAAACAACACCCTTC  148

seq1  TTAAGGTTAATAGATAATCATTTACCCTGTCTTCATACTGTTTTGTGACT  291
      | ||   | | | |||||                |||          | |
seq2  TCAATAGTCACAAATAAT----------------ATA---------AAAT  173

seq1  ATCT-TCTGTGACTCTCATATATAGAAGCAATAACTACCAATAAAAATAT  340
      ||||    || ||||| |  ||  |||| ||        || |    |||
seq2  ATCTCGGCGTAACTCT-AACTAAGGAAGTAA--------AAGATCTGTAT  214

seq1  AATAATAAATGCTTATTGAATAAGACAAAAAGTAATGAATGGCTTATCA-  389
       |||| || | |   |     |||| | ||| ||| |||   || |  | 
seq2  GATAAAAACTTCAAGTCTCTGAAGAAAGAAATTAAAGAAGATCTCAGAAG  264

seq1  ATG---AGTTTTTCTGGACCTTAATATGGATTGGCAGAATCAACATTGTA  436
      |||   || | | |    | |    |||||||||||| ||||||||||||
seq2  ATGGAAAGATCTCC----CATGCTCATGGATTGGCAGGATCAACATTGTA  310

seq1  AAAATGGCTATCTTGCCAAAAGCAATCTACAGATTCAATGCAATCCCCAT  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGGCTATCTTGCCAAAAGCAATCTACAGATTCAATGCAATCCCCAT  360

seq1  CAAAATTCCAACTCAATTCTTCAACGAATTAG  518
      ||||||||||||||||||||||||||||||||
seq2  CAAAATTCCAACTCAATTCTTCAACGAATTAG  392