BAC Information

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BAC

Clone NameB6Ng01-117G13
Chromosome2 (Build37)
Map Location 151,595,527 - 151,595,969
singlet/doubletsinglet
Overlap genenone
Upstream geneEntpd6, LOC100043605, Pygb, Abhd12, Gins1, LOC668925, 4930519N13Rik, LOC668926, Nanp, LOC433486, LOC381390, 4930442J19Rik, LOC100043839, LOC100043840, 4921509C19Rik, Nsfl1c, Fkbp1a, Sdcbp2, Snph, LOC668929, BC052486, 5430405G05Rik, Psmf1
Downstream geneRspo4, Angpt4, 5430432M24Rik, 2310046K01Rik, Scrt2, Srxn1, Tcf15, LOC100043843, Csnk2a1, Tbc1d20, Rbck1, Trib3, LOC628060, Nrsn2, Sox12, Zcchc3, 6820408C15Rik, EG629114, LOC668930, 9230107O10Rik, 9230002F21Rik, EG654457, OTTMUSG00000015852, Defb29, 4930525K10Rik, Defb19, OTTMUSG00000015859, Defb36, OTTMUSG00000015862, Rem1, H13, Mcts2, Id1, LOC629170, Cox4i2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-117G13.bB6Ng01-117G13.g
ACCDH922156DH922157
length3121,145
definitionDH922156|Mus musculus domesticus DNA, BAC clone: B6Ng01-117G13, 5' end.DH922157|Mus musculus domesticus DNA, BAC clone: B6Ng01-117G13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
atcctatggtctaggcaggcagacacggaaggactgcaagatgctctcca
ctcagccagggtgggcatctaaggcactgaccccctcaagggttgagggg
gtggacaaggggcagcccctgaccagggcccccggtgaaacccctgtagc
tctggggttatgggagagagggctgagggagagaggttcccacacaggcg
agagtaagtgcaacgggccttgatgaacagagacagtctatggttttaga
gctttattgtagaaaggcaggggaaaagaagagaaggtggagagagagag
agagagagagag
gaattctcacctgaggaatacggaatggcagagaaacacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaacactgagat
tccacttcactccagtcagaatggctaagatcaaaaactcaggtgacagc
agatgttggcgaggatgtggagaagggaacactcctccattgttggtggg
attgcaagcttgtacaaccactctgaaaatcagtctgatggttcctcaga
aaattggacatagtactaccggaggatcccgcaatacctctcctgggcat
atatccagaagatgtcccaaccggtaagaagaacacatgctccactatgt
tcatagcagccttgtttataatagccagaagctggaaagaacccagatgc
ccctcaacagaggaatggatacagaaaatgtggtacatttacacaatgga
atactactcagctattaaaaaaatgaatttatgaaattcctaggcaaatg
gatggacctggagggtatcatcctgagtgaagtaacccaatcagaaagga
acttgcacaatatgtactcattgataagtggatattagcccagaaactta
ggatacccaagatataagatataacttgtcaaacgcatgaaattcaagaa
gaatgaagaccaaagtgtggacactttaccctttcttagaaatgggaaca
aaacacccatagaaggagttacagagacaaaatttggagctgtgacgaaa
ggatggaccatctagtgactgccatatgcagggatccatcccataatcag
cttccaaatgctgacaccatctcatacactagcaagatttcgctgaaagg
acccagttatagctctctcttctgagaccatgcagggcctagcaaacaca
gaaatggatgattacagtcagctattggatgggtcacatgctccctaatg
gagagctagagaattacccaaggagctatagggaacttcctccctatagt
tggacacatatgactaccagtacccggagctcttgtctttagctgcatat
gtatcaaaagatgctagtcgcatcactgcaagaagtccattgacttgcac
ttattgccagtcagtacgccagggccaaagtaaggcgtatgtgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_151595527_151595969
seq2: B6Ng01-117G13.b_294_365 (reverse)

seq1  CTCTCTCTCTGTTGCTGTTTGTTTTTTTCTAGACAGAGTTTCTCTGCATG  50
                                                        
seq2  --------------------------------------------------  0

seq1  GTCCTGGCTGTTCTGGAACTCACTCTGTAGACCAGGCTAGCCTTAAACTC  100
                                                        
seq2  --------------------------------------------------  0

seq1  AGAGATCCACCTGCCTCTGCCTCCCCAATGCTGAGATTAAAGGAGTGAGT  150
                                                        
seq2  --------------------------------------------------  0

seq1  ACGCCACCGCAGCCCCAGCTCAAGGTTCTGTTCTAGTTTTTTGGTTTTCA  200
                                                        
seq2  --------------------------------------------------  0

seq1  AAGAATTTTTTTTTCTGATTTGTCATTGTTGATAGATAGAAACACTATTG  250
                                                        
seq2  --------------------------------------------------  0

seq1  ATGTCTAATTATTGATTACCTCTCCAGTTACTTTGCTGAGCTCTTAAAAG  300
                                                        
seq2  --------------------------------------------------  0

seq1  TTCTAACAGGTTCTTATTCTCTTTCTCCCTTGCTCCCTCTCTCTCTCTCC  350
                                          ||||||||||||| 
seq2  ------------------------------------CTCTCTCTCTCTC-  13

seq1  ACCTTCCCTTCTTCCCTCTTTCCACGTGGCCATGGCTGCCCTCTACTTCT  400
                  || |||| |||||                    |||||
seq2  ------------TCTCTCTCTCCAC--------------------CTTCT  31

seq1  CTACTCTTCTCCCTGCCTTTCTACAATAAACACCTTAAAACCA  443
      || || ||| ||||||||||||||||||||  |  ||||||||
seq2  CTTCTTTTC-CCCTGCCTTTCTACAATAAA-GCTCTAAAACCA  72