BAC Information

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BAC

Clone NameB6Ng01-118K22
Chromosome2 (Build37)
Map Location 21,971,090 - 21,971,603
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC675912, C130046B21Rik, 4933434I06Rik, Thnsl1, Gpr158
Downstream geneLOC637235, Myo3a, LOC100041703, Myo3a, Gad2, Apbb1ip, Pdss1, Abi1, 1200016E24Rik, Acbd5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-118K22.bB6Ng01-118K22.g
ACCDH923095DH923096
length1,1051,145
definitionDH923095|Mus musculus domesticus DNA, BAC clone: B6Ng01-118K22, 5' end.DH923096|Mus musculus domesticus DNA, BAC clone: B6Ng01-118K22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgttccaaccagtaagaaggacacatgctccagtat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggttacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggattcccaagatataaggtacaatttgctaaacacatgaagctcaag
aagaatgaagactgtagtgtggacactatgcccctccttagaattgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgaggtga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcataccctagcaagattttattgaaa
ggtcccagatgtagctatctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacaggctcccat
ggagagctagagaaagacccagagctaaagggatctgcaccctatagtga
cacatatgactacagtacccgagctctgactctagctgcatatgtatcaa
gatgctatcgtcatcactgtaaagagggatcaatgaccgcacttgtatgc
ccagt
gaattctcacctgaggaatatcgaatggctgagaagcacctgaaaaaatg
ttcagcatccttaaccatcagggaaatgtaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcaaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggggttcctcag
aaaattggacatagtactactggaggatcctgcaatacctctcctgggca
tatatccagaagatgttccaactggtaagagagacacatgctccactatg
ttcatagcagccttatttataatagccagaagctggaaagaacccagatg
tcccacatcagaggaatggatacaaaaaatgtggtacatttacacaatgg
agtactactcagctattagaaagaatttatgaaattcctaggcaaatggt
tggacctggagggcatcatactgaatgaggtaacccaatcacaaaagaac
tcaaatgatatgtactcactgataagtggatattagcccagaaacttaga
atacccaagatataagatacaatttgcaaaacacatgaaactcaagaaga
acgaagaccaaagtgtggacactttgccccttcttagaattgggaacaaa
acacccatggaaggagttacagagacaaaagtttggagctgagacaaaag
gatggaccatctagagactgccatatccagggatccatcccataatcagg
ctccaaatgctgccaccattgcatacactagcaagattttgctgaaagga
cactgatatagccttctcttgtgagactatgccggggcctagcaaacaca
gaagtggatgctcacagtcagctattggatggatcacaggaccccatgaa
gagctagagaagtacccaagagctaagggactgcaccctatagtgacaca
tatcactaacagtacccgagctttgtctctagctgcatatgtatcaatga
tgctagtcgcatcactagaaagagagatcaatgtcatgcactttatatgg
ctcagtacagggaaccaggcaaaatgggaatggtggtaggaaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_21971090_21971603
seq2: B6Ng01-118K22.b_1022_1155 (reverse)

seq1  ACTGGGCATACAAGTGCAACAATGATTATATAAGATTTATAATACTGATG  50
                                                        
seq2  --------------------------------------------------  0

seq1  TTTGAGAAGAAAGTGGACCTAGAGTGAACGTTATTTTTATTTCATTCCTT  100
                                                        
seq2  --------------------------------------------------  0

seq1  TTTATTTATAACAAAAAATATAAAGCATAGATAATTATGGTATTCAGCTT  150
                                                        
seq2  --------------------------------------------------  0

seq1  TTTCACAAATACCCAGAGTTTTTATTAAACAAATAAAATTTATTTTAAAA  200
                                                        
seq2  --------------------------------------------------  0

seq1  TATACAACTCAGTATTGACATTTTTTTCTTTTTTTTTTTTAATTAGGTAT  250
                                                        
seq2  --------------------------------------------------  0

seq1  TTAGCTCATTTACATTTCCAATGCTATACCAAAAGTCCCCCATATCCACC  300
                                                        
seq2  --------------------------------------------------  0

seq1  CACCCCCACTCCCCTGCCCACCCACTCCCCCTTTTTGGCCCTGGTATTCC  350
                                                        
seq2  --------------------------------------------------  0

seq1  CCTGTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTCCA  400
           ||| ||||||| ||    |||  |||  || |  | |||||| ||
seq2  -----ACT-GGGCATACAA---GTGC-GGTC--ATTGATCCCTCTTTACA  38

seq1  GTGATGGCCGACTAGGCCATCTTTTGATATATATGCAGCTAGAGTCAAGA  450
      ||||| | ||| |||  ||||  |||||| |||||||||||||||| |||
seq2  GTGAT-GACGA-TAG--CATC--TTGATACATATGCAGCTAGAGTC-AGA  81

seq1  GCTCCGGGATACTGGTTAGTTCATAATGTTGTTCCACCTATAGGGTTGCA  500
      ||||  || |||||  ||| |||||    |||  || |||||||| ||||
seq2  GCTC--GGGTACTG--TAG-TCATA----TGTGTCA-CTATAGGG-TGCA  120

seq1  GATCCCTTTAGCTC  514
      ||||||||||||||
seq2  GATCCCTTTAGCTC  134