BAC Information

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BAC

Clone NameB6Ng01-119D07
Chromosome2 (Build37)
Map Location 40,807,769 - 40,808,734
singlet/doubletsinglet
Overlap geneLrp1b
Upstream geneLOC100042604, Magmas-ps, LOC666531
Downstream geneLOC100042629
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-119D07.bB6Ng01-119D07.g
ACCDH923481DH923482
length1,250953
definitionDH923481|Mus musculus domesticus DNA, BAC clone: B6Ng01-119D07, 5' end.DH923482|Mus musculus domesticus DNA, BAC clone: B6Ng01-119D07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttgtttgatt
ttctgaagtccaccttcttgagttctttatatatgtagtgtttcttatta
aagaagcaagaaataaaagtatgacaatgaatagaccttattcatgccct
gaagagtttagtaaaaaacaagaaaaaagtgtgatgaaaaaattgtaagg
tctcataattgtcttatctaaattatgtactgaaattttaacatatttca
gtattgtgttaatactcagtgaaacaatataatagtctattttattttta
tttattcacttttaaaacattttacatgtatagcttgtagattgaaactt
ttcagcttccacttctctaccacccaccatcttttctccctacccataaa
tctttctgtctaatttatgtctgttctttatgtagtgtgacccaccaaat
tagctaaggctatgggcatattagttggaattgtccactggaacctgggg
aactcagcagaggttacaaaactgaagaaactactccttctctctcagaa
tctacacattctatagactgctgctctgttagaataatactgttctttac
tgcataaaagaattccagcctcatgagttttgccacttacttgcagttgt
tcttagcacctgtggtattgatgttctgttctaaggccttttcctgtgtc
agctagttcaagtctgttttctgttttatcagattcagtgtatccgacct
tatgttgaggtatttaatcagtttggacctgagtctgtgaagggtgataa
atataaatctattttcatccttctacctgcagcactaaagatttatgcgc
accgttgttgaagatgctctcttttctaaatagtgggttttttttttttt
tttttgcattctgtgtcaaaggcaagtatctgtaagcatatgaaatttta
tttggaacttcagcttgatgacattcaccaacatgtctggttttttatga
aaataccatgctgttttattagtacagctccggtaataaatttaaaatct
gggattataatacctccccacttctattttatccggattgttttactatc
taagttttgtttcagatgaaactgaaatttgtcgattctgtgagaattga
ctgattgtgctgatgtataacttcagtcatgtcaaattatcctactgcgg
acatgtattccacttcaaatctctcctgaatatttctgtaagcacgatag

gaattcacttacaaatattacttagtattaaaaataaatctcattttatg
cttttaatattttagtcaatgctatgaagaacctaggttcagaatgttga
aataatttgaacaaagtttatagttaataataagttgaaacaaattgaga
tatgaacatgtctgatattaaaatgggattctaactaaaaaaagaaagaa
atcaaatttggtgaaattgaaattatttttggttagatttccttaagtag
ctaaagataaatgattggactaatgttttgcggagatttgttaggtagct
agtcctattagaggattgaagggcactgagaatgagccctctctgataac
tagtaccttctaaaaccaaaactaatactacagagctgggcttattacca
ttctttcaatgacctattattccccttttatttgaataaaattaaccaag
aggcaaaattgaatgatattttattattcatgtatgaatttggtagaatt
aggttaaaattatttatgaaagaaatgtattgggttttatagaagcaaag
aaaatgtttttatgaagatgggtaaaagactcctaaatgttttagaattc
tttaccaaatatcacatatgaggtaataaataaataaataaccctcacca
aaagttaatcaaaatgagcctgccagtcatttgtgaagtaagacaaaaaa
ggtaattacgactctttggggactttaaccttcttacggatagtcagaca
tatgtatctctgtctttctcacccgtgagtattcttccctcaactctaca
taaactattttctataggatctctgtgtatcatctgattctttctagttt
cataaaaaccagtgatttgagcaactagagccaaattccactacagtttt
gtcactagctcaacatgatgtcagtacgtgaagaaaagtttttgttactg
aga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_40807769_40808734
seq2: B6Ng01-119D07.g_67_1019

seq1  GAATTCACTTACAAATATTACTTAGTATTAAAAATAAATCTCATTTTATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTACAAATATTACTTAGTATTAAAAATAAATCTCATTTTATG  50

seq1  CTTTTAATATTTTAGTCAATGCTATGAAGAACCTAGGTTCAGAATGTTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAATATTTTAGTCAATGCTATGAAGAACCTAGGTTCAGAATGTTGA  100

seq1  AATAATTTGAACAAAGTTTATAGTTAATAATAAGTTGAAACAAATTGAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTTGAACAAAGTTTATAGTTAATAATAAGTTGAAACAAATTGAGA  150

seq1  TATGAACATGTCTGATATTAAAATGGGATTCTAACTAAAAAAAGAAAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAACATGTCTGATATTAAAATGGGATTCTAACTAAAAAAAGAAAGAA  200

seq1  ATCAAATTTGGTGAAATTGAAATTATTTTTGGTTAGATTTCCTTAAGTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAATTTGGTGAAATTGAAATTATTTTTGGTTAGATTTCCTTAAGTAG  250

seq1  CTAAAGATAAATGATTGGACTAATGTTTTGCGGAGATTTGTTAGGTAGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGATAAATGATTGGACTAATGTTTTGCGGAGATTTGTTAGGTAGCT  300

seq1  AGTCCTATTAGAGGATTGAAGGGCACTGAGAATGAGCCCTCTCTGATAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTATTAGAGGATTGAAGGGCACTGAGAATGAGCCCTCTCTGATAAC  350

seq1  TAGTACCTTCTAAAACCAAAACTAATACTACAGAGCTGGGCTTATTACCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTACCTTCTAAAACCAAAACTAATACTACAGAGCTGGGCTTATTACCA  400

seq1  TTCTTTCAATGACCTATTATTCCCCTTTTATTTGAATAAAATTAACCAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCAATGACCTATTATTCCCCTTTTATTTGAATAAAATTAACCAAG  450

seq1  AGGCAAAATTGAATGATATTTTATTATTCATGTATGAATTTGGTAGAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAAATTGAATGATATTTTATTATTCATGTATGAATTTGGTAGAATT  500

seq1  AGGTTAAAATTATTTATGAAAGAAATGTATTGGGTTTTATAGAAGCAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTAAAATTATTTATGAAAGAAATGTATTGGGTTTTATAGAAGCAAAG  550

seq1  AAAATGTTTTTATGAAGATGGGTAAAAGACTCCTAAATGTTTTAGAATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTTTTTATGAAGATGGGTAAAAGACTCCTAAATGTTTTAGAATTC  600

seq1  TTTACCAAATATCACATATGAGGTAATAAATAAATAAATAACCCTCACCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCAAATATCACATATGAGGTAATAAATAAATAAATAACCCTCACCA  650

seq1  AAAGTTAATCAAAATGAGCCTGCCAGTCATTTGTGAAGTAAGACAAAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTAATCAAAATGAGCCTGCCAGTCATTTGTGAAGTAAGACAAAAAA  700

seq1  GGTAATTACGACTCTTTGGGGACTTTAACCTTCTTACGGATAGTCAGACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAATTACGACTCTTTGGGGACTTTAACCTTCTTACGGATAGTCAGACA  750

seq1  TATGTATCTCTGTCTTTCTCACCCGTGAGTATTCTTCCCTCAACTCTACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATCTCTGTCTTTCTCACCCGTGAGTATTCTTCCCTCAACTCTACA  800

seq1  TAAACTATTTTCTATTAAGATCTCTGTGTATCATCTGAATTCTTTCTAGT  850
      |||||||||||||| || ||||||||||||||||||| ||||||||||| 
seq2  TAAACTATTTTCTA-TAGGATCTCTGTGTATCATCTG-ATTCTTTCTAG-  847

seq1  TTTCATAAAAACCAGTGATTTGAAGGCAAACTAGAGCCAAATTCCACTAA  900
      |||||||||||||||||||||||  || |||||||||||||||||||| |
seq2  TTTCATAAAAACCAGTGATTTGA--GC-AACTAGAGCCAAATTCCACT-A  893

seq1  CAGTTTTTGGTTCACTAGCTTCAACATGATGGTCAGTACGTGGAAGAAAA  950
      |||||||    |||||||| |||||||||| |||||||||| ||||||||
seq2  CAGTTTT---GTCACTAGC-TCAACATGAT-GTCAGTACGT-GAAGAAAA  937

seq1  GTTATTGTTACTGAGA  966
      ||| ||||||||||||
seq2  GTTTTTGTTACTGAGA  953