BAC Information

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BAC

Clone NameB6Ng01-120A12
Chromosome2 (Build37)
Map Location 140,593,731 - 140,594,859
singlet/doubletsinglet
Overlap genenone
Upstream geneTasp1, LOC672103, LOC269365, Esf1, 2310003L22Rik, Sel1l2, 2900006F19Rik, Flrt3
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120A12.bB6Ng01-120A12.g
ACCDH924084DH924085
length1,2521,125
definitionDH924084|Mus musculus domesticus DNA, BAC clone: B6Ng01-120A12, 5' end.DH924085|Mus musculus domesticus DNA, BAC clone: B6Ng01-120A12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaacctcttttctagtccaaagtcttccatattcctccaaacaac
agcagcatggtcaggcctatcaaagcaatacccaactcttggtgccaacc
tctgtcttagttactgttctattgctacaaggagacaccgtgacccatgc
aacccttataaaagaaagcatttaattggggggctgtttacagtattaga
gggtttgtctgttatcatcattgtgagatctgcagggagcaggcagagag
agtctggggttggcatgggttttgaaacctcaaggccaacttccaatgat
acatcttctccaacaaggccacacctcctaatttttccaaaagttctact
aactggagatgaaacattcaaacatatgaagcaacaggaacctttctcat
tcaaaccaccacaaatacttactcttctatgtccttggatactctgttca
taataattggaaattagaaacagccttgatatccatcaactaatgaacag
ataatgaaaacgtgctaatttatacgatgaaatagtattcactgtttaag
aaaactaggttatgaaatttgctggtaaatgggttgaaatagaaaacaaa
caaaagcatcctgagtgagataactcagactcaagaaggcaaacactgaa
tgttttcacttccatgcggatgtgagcgtttaatcctttgatatttgagc
tataatctctgtaactgaagactagataatgagttaggaactaggatgga
ggtgaaggtttcccgaggaaggggaaatagaatatagagttatggaggaa
cagagggtgaggcggattgaaaggattcaatggggatagggatggaagac
aggaataagggaggtaatatgaggagggacaactaacactaatggccatg
gaaacctgctactgtagaagtacatatattatataaatatgtaataatgt
ataaatatatatatttacatattacatacacagttatatattaatgttta
attatatatatttataatgtaaaataattatacataactatgtttgtaat
acatatataaatttaaatatattacattatttttatattgaagaaatttg
aatgagtcacaaaataattgggaacagtgctcccatctagaccatcatca
cccacctagtgtaaaactcctcaatgacgggaatgcttagtctattaagt
gttggccaaggaacccataggatctcaaccacattatgtgccacagactg
ct
gaattccaatgaaactggaccataaaggaagatagaagtacacacaacag
gtaatgctactgatttttattaaaaaacagtatgagagaagactataaat
acatgtatgaggatgcattgtataatctacctgaaatagctgtgtagaaa
ctagacactcactatctatcaaaataaataagtaagacagacaatctgga
tagatgtttaactggtaagaaaactgaatcagtaatcaaaaaccactgga
caaatgaaagcgcaggaccagatggctcaactgttgagtgctactaccat
tcaaaagagaacacgaatcacaaactcttctcaaaactgaaaaggaaaga
acatttcctaagttgtttgaccggcctagaattacccagataagaagacc
aaacaaagacactactcaaaaactacaataatcttgatcaatattgctgt
gaaatactcgcaaggagaagtcagcagcctggttaaaggattctgcacca
tgaacaagtaggatctgtttatatcagccaggtttaacatgtaactcttg
cttatcaaagtacaagtatagtttaaaaggaaactacagaggcaagccac
agtgtctcagaaagcaaaacactggtggcagaagtatttgcagagtctta
cacaccatcatgtccctgaaaggttttatttctttctgttctattctttt
cctttcttttttcttttctttttttaagctttagcctaaaggctctctcc
cggaagcctgacaacctgatctggatccctagaactttcttcaagttgtc
ctctgatctccctaggcatgaatcctgtgtcccctgctttaaacccaaaa
ctaaataaatgtagaattttagaaaatagataacccaccaacaaaacaag
taattgtgaaacagtccatagtagtagcgaaaattacacttacaaaatag
aacaattcgaaaacatcgcatgatgtcatgaatatgactacctgtaaatg
caaattataggagagaaaaaatgtaattgaagctgccagtgtctggcagg
aaggaccatgagaggtattatttttgtacatacagaagtttttgtttcag
tgatggtaggttctggaaaatggct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_140593731_140594859
seq2: B6Ng01-120A12.g_66_1190 (reverse)

seq1  AGCCA-TTTCCAGAACTTACCATCAACTGAAACAGAAAC-TCTGTATGTA  48
      ||||| |||||||||| ||||||| ||||||||| |||| ||||||||||
seq2  AGCCATTTTCCAGAACCTACCATC-ACTGAAACAAAAACTTCTGTATGTA  49

seq1  CCAAAAT-ATACCTCTTCATGGTTCCTTCCTGCCAGACACTGGCAGCTTC  97
      | ||||| ||||||| |||||| |||||||||||||||||||||||||||
seq2  CAAAAATAATACCTC-TCATGG-TCCTTCCTGCCAGACACTGGCAGCTTC  97

seq1  AATTACATTTTTTCTCTCCCTATAATTTTGCATTTTACAGGTAGTTCATA  147
      ||||||||||||||||| ||||||| |||||| ||||||||||| |||||
seq2  AATTACATTTTTTCTCT-CCTATAA-TTTGCA-TTTACAGGTAG-TCATA  143

seq1  TTCATGACATCATGCGATGTTTTCGAATTGTTCTATTTTGTAAGTGTAAT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGACATCATGCGATGTTTTCGAATTGTTCTATTTTGTAAGTGTAAT  193

seq1  TTTCGCTACTACTATGGACTGTTTCACAATTACTTGTTTTGTTGGTGGGT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCGCTACTACTATGGACTGTTTCACAATTACTTGTTTTGTTGGTGGGT  243

seq1  TATCTATTTTCTAAAATTCTACATTTATTTAGTTTTGGGTTTAAAGCAGG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTATTTTCTAAAATTCTACATTTATTTAGTTTTGGGTTTAAAGCAGG  293

seq1  GGACACAGGATTCATGCCTAGGGAGATCAGAGGACAACTTGAAGAAAGTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACAGGATTCATGCCTAGGGAGATCAGAGGACAACTTGAAGAAAGTT  343

seq1  CTAGGGATCCAGATCAGGTTGTCAGGCTTCCGGGAGAGAGCCTTTAGGCT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGGATCCAGATCAGGTTGTCAGGCTTCCGGGAGAGAGCCTTTAGGCT  393

seq1  AAAGCTTAAAAAAAGAAAAGAAAAAAGAAAGGAAAAGAATAGAACAGAAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTTAAAAAAAGAAAAGAAAAAAGAAAGGAAAAGAATAGAACAGAAA  443

seq1  GAAATAAAACCTTTCAGGGACATGATGGTGTGTAAGACTCTGCAAATACT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAAAACCTTTCAGGGACATGATGGTGTGTAAGACTCTGCAAATACT  493

seq1  TCTGCCACCAGTGTTTTGCTTTCTGAGACACTGTGGCTTGCCTCTGTAGT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCACCAGTGTTTTGCTTTCTGAGACACTGTGGCTTGCCTCTGTAGT  543

seq1  TTCCTTTTAAACTATACTTGTACTTTGATAAGCAAGAGTTACATGTTAAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTTAAACTATACTTGTACTTTGATAAGCAAGAGTTACATGTTAAA  593

seq1  CCTGGCTGATATAAACAGATCCTACTTGTTCATGGTGCAGAATCCTTTAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCTGATATAAACAGATCCTACTTGTTCATGGTGCAGAATCCTTTAA  643

seq1  CCAGGCTGCTGACTTCTCCTTGCGAGTATTTCACAGCAATATTGATCAAG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCTGCTGACTTCTCCTTGCGAGTATTTCACAGCAATATTGATCAAG  693

seq1  ATTATTGTAGTTTTTGAGTAGTGTCTTTGTTTGGTCTTCTTATCTGGGTA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTGTAGTTTTTGAGTAGTGTCTTTGTTTGGTCTTCTTATCTGGGTA  743

seq1  ATTCTAGGCCGGTCAAACAACTTAGGAAATGTTCTTTCCTTTTCAGTTTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAGGCCGGTCAAACAACTTAGGAAATGTTCTTTCCTTTTCAGTTTT  793

seq1  GAGAAGAGTTTGTGATTCGTGTTCTCTTTTGAATGGTAGTAGCACTCAAC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGAGTTTGTGATTCGTGTTCTCTTTTGAATGGTAGTAGCACTCAAC  843

seq1  AGTTGAGCCATCTGGTCCTGCGCTTTCATTTGTCCAGTGGTTTTTGATTA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGAGCCATCTGGTCCTGCGCTTTCATTTGTCCAGTGGTTTTTGATTA  893

seq1  CTGATTCAGTTTTCTTACCAGTTAAACATCTATCCAGATTGTCTGTCTTA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTCAGTTTTCTTACCAGTTAAACATCTATCCAGATTGTCTGTCTTA  943

seq1  CTTATTTATTTTGATAGATAGTGAGTGTCTAGTTTCTACACAGCTATTTC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTTATTTTGATAGATAGTGAGTGTCTAGTTTCTACACAGCTATTTC  993

seq1  AGGTAGATTATACAATGCATCCTCATACATGTATTTATAGTCTTCTCTCA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGATTATACAATGCATCCTCATACATGTATTTATAGTCTTCTCTCA  1043

seq1  TACTGTTTTTTAATAAAAATCAGTAGCATTACCTGTTGTGTGTACTTCTA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTTTTTTAATAAAAATCAGTAGCATTACCTGTTGTGTGTACTTCTA  1093

seq1  TCTTCCTTTATGGTCCAGTTTCATTGGAATTC  1129
      ||||||||||||||||||||||||||||||||
seq2  TCTTCCTTTATGGTCCAGTTTCATTGGAATTC  1125