BAC Information

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BAC

Clone NameB6Ng01-123L14
Chromosome2 (Build37)
Map Location 112,892,655 - 113,067,064
singlet/doubletdoublet
Overlap genenone
Upstream geneOlfr1313, Olfr1314, Olfr1315-ps1, Olfr1316, Olfr1317, Olfr1318, GA_x5J8B7W3P0G-705890-705633, LOC100043187, Agpat7, Nut, Nola3, Slc12a6, Tmem85, EG668839, 2410042D21Rik, 2900064A13Rik, Chrm5, Aven, Ryr3
Downstream gene4930563P21Rik, Fmn1, Grem1, LOC100043520, Scg5, Arhgap11a, LOC100043526, Gja9, A530058N18Rik, Actc1, Aqr, Zfp770
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-123L14.bB6Ng01-123L14.g
ACCDH926815DH926816
length1,114431
definitionDH926815|Mus musculus domesticus DNA, BAC clone: B6Ng01-123L14, 5' end.DH926816|Mus musculus domesticus DNA, BAC clone: B6Ng01-123L14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(113,065,926 - 113,067,064)(112,892,655 - 112,893,091)
sequence
gaattccttttgtctatttgtttgaactagagatttctaatcctactgat
ttggtttagctgtgacatcagaaaggatgacaatcccatgttggctgaga
aaccgtatagaggttctaacaactttgtaagtcctaactgcattggatct
tccttaatgtactaaatttttagtctgtttttagaactaagtttcaattt
atcaaggcagaaattaactttttttccccttgacttcaaattactacata
gaagatgccatgaactacgtgccaaagattgtttctcagattctggggtt
tggtaaaggagactcagggatatcacctggaatgagaggacaaggctcct
catgaaaaatcctgggctcattgcccccatttctcccctactttcatcca
gagcatcctgccctcatgtcttgtctttgcatgttagtataatgaggacc
gtgccatgtttattcacactgtgtttctgaggacctcaccatcatggggt
acttatcagcccagtttgcaattgcccaatggcttgctctgtcaactgaa
acagcctaaatgtgctagagaattagcaccggtgggagcagctttcaccc
actgactgaccagaggtactttataaatagcccagcttccttgttcttcc
tgggaatgattttgagaagcctatttgacacgagtcccagaaagatcagg
ttctgtttctcacacctgtagctggtttaatagcttaggcacttccttcc
tttccttcctttcacaagtcttgggatcatcttgcaaatcctttccttgg
gtctacttttggcaaaccagacagcagcccaagacatctgctcatcaccg
atctcttctgagggctttactaacacggattctttcagctctctaagcac
tatcttaacagttttgaaaatttcatttccccttgaaaatagaaattaaa
agaggaaaggtatacatctaagcagagtcacaaactatattatttgtgct
agacccagagtatagcatctaaatgaagaactttgaaattgcttatcaga
tggagtcatacctttggaaaaaacaaacaaacaaacaaacccacatgtct
ttcaatccttagca
tcttggcttttcgctgcttcattcccactgtgggcatcttagtttgggcc
cttagaatgacagcactaatgccagcaagattttgctgaaagcaccctga
tatagctgtctcttgtgaggctatgccagtgcctagcaaacacagaagcg
gattctcacagtcatctataggatggaacacagggcccccaatggaggag
ctagagaaagcacccaaggagctgaaggggtctgcaaccctataggtaga
acagcaatatgaactaattagtaccccacagaactgtgtctctagctgta
tatgtagcagaagatggcctagtcagccatcagtgggaagagaggcccct
tggtcttgcaaactttatatgccccagtacaagggaacgccagggccaag
aagtgggagtgggtgggtaggggagcagggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_113065926_113067064
seq2: B6Ng01-123L14.b_48_1161 (reverse)

seq1  TGCTAAGGGATTTGGAAGACATTGTGGGTTTTGTTTTGTTTTGTTTTGTT  50
      ||||||||   ||| |||||| |||||||||   |||||||   ||||||
seq2  TGCTAAGG--ATTGAAAGACA-TGTGGGTTT--GTTTGTTT--GTTTGTT  43

seq1  TTATCCAAAGGGTATGACTCCCTTTCTGGATAAGCAAATTTCAAAGTTCC  100
      || |||||| ||||||||||| | |   ||||||| |||||||||||| |
seq2  TTTTCCAAA-GGTATGACTCCATCT---GATAAGC-AATTTCAAAGTT-C  87

seq1  TTCATTTTAGATTGCTATACTCTGGGTCTTAGCACAAATAATTATTAGTT  150
      |||| |||||| |||||||||||||||| |||||||||||||   ||| |
seq2  TTCA-TTTAGA-TGCTATACTCTGGGTC-TAGCACAAATAAT--ATAG-T  131

seq1  TTGTGGACTCTGCTTAGATGTATAACCTTTCCTCTTTTTAATTTTCTTAT  200
      |||| |||||||||||||||||| |||||||||| |||||||||   |||
seq2  TTGT-GACTCTGCTTAGATGTAT-ACCTTTCCTC-TTTTAATTT--CTAT  176

seq1  TTTCAAGGGGAAATGAAATTTTCAAAACTGTTAAGATAGTGCTTAGAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAGGGGAAATGAAATTTTCAAAACTGTTAAGATAGTGCTTAGAGAG  226

seq1  CTGAAAGAATCCGTGTTAGTAAAGCCCTCAGAAGAGATCGGTGATGAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAGAATCCGTGTTAGTAAAGCCCTCAGAAGAGATCGGTGATGAGCA  276

seq1  GATGTCTTGGGCTGCTGTCTGGTTTTGCCAAAAGTAGACCCAAGGAAAGG  350
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GATGTCTTGGGCTGCTGTCTGG-TTTGCCAAAAGTAGACCCAAGGAAAGG  325

seq1  ATTTGCAAGATGATCCCAAGACTTGTGAAAGGAAGGAAAGGAAGGAAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCAAGATGATCCCAAGACTTGTGAAAGGAAGGAAAGGAAGGAAGTG  375

seq1  CCTAAGCTATTAAACCAGCTACAGGTGTGAGAAACAGAACCTGATCTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAGCTATTAAACCAGCTACAGGTGTGAGAAACAGAACCTGATCTTTC  425

seq1  TGGGACTCGTGTCAAATAGGCTTCTCAAAATCATTCCCAGGAAGAACAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACTCGTGTCAAATAGGCTTCTCAAAATCATTCCCAGGAAGAACAAG  475

seq1  GAAGCTGGGCTATTTATAAAGTACCTCTGGTCAGTCAGTGGGTGAAAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTGGGCTATTTATAAAGTACCTCTGGTCAGTCAGTGGGTGAAAGCT  525

seq1  GCTCCCACCGGTGCTAATTCTCTAGCACATTTAGGCTGTTTCAGTTGACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCACCGGTGCTAATTCTCTAGCACATTTAGGCTGTTTCAGTTGACA  575

seq1  GAGCAAGCCATTGGGCAATTGCAAACTGGGCTGATAAGTACCCCATGATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAAGCCATTGGGCAATTGCAAACTGGGCTGATAAGTACCCCATGATG  625

seq1  GTGAGGTCCTCAGAAACACAGTGTGAATAAACATGGCACGGTCCTCATTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGTCCTCAGAAACACAGTGTGAATAAACATGGCACGGTCCTCATTA  675

seq1  TACTAACATGCAAAGACAAGACATGAGGGCAGGATGCTCTGGATGAAAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAACATGCAAAGACAAGACATGAGGGCAGGATGCTCTGGATGAAAGT  725

seq1  AGGGGAGAAATGGGGGCAATGAGCCCAGGATTTTTCATGAGGAGCCTTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAGAAATGGGGGCAATGAGCCCAGGATTTTTCATGAGGAGCCTTGT  775

seq1  CCTCTCATTCCAGGTGATATCCCTGAGTCTCCTTTACCAAACCCCAGAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCATTCCAGGTGATATCCCTGAGTCTCCTTTACCAAACCCCAGAAT  825

seq1  CTGAGAAACAATCTTTGGCACGTAGTTCATGGCATCTTCTATGTAGTAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAAACAATCTTTGGCACGTAGTTCATGGCATCTTCTATGTAGTAAT  875

seq1  TTGAAGTCAAGGGGAAAAAAAGTTAATTTCTGCCTTGATAAATTGAAACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGTCAAGGGGAAAAAAAGTTAATTTCTGCCTTGATAAATTGAAACT  925

seq1  TAGTTCTAAAAACAGACTAAAAATTTAGTACATTAAGGAAGATCCAATGC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCTAAAAACAGACTAAAAATTTAGTACATTAAGGAAGATCCAATGC  975

seq1  AGTTAGGACTTACAAAGTTGTTAGAACCTCTATACGGTTTCTCAGCCAAC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGGACTTACAAAGTTGTTAGAACCTCTATACGGTTTCTCAGCCAAC  1025

seq1  ATGGGATTGTCATCCTTTCTGATGTCACAGCTAAACCAAATCAGTAGGAT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGATTGTCATCCTTTCTGATGTCACAGCTAAACCAAATCAGTAGGAT  1075

seq1  TAGAAATCTCTAGTTCAAACAAATAGACAAAAGGAATTC  1139
      |||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATCTCTAGTTCAAACAAATAGACAAAAGGAATTC  1114

seq1: chr2_112892655_112893091
seq2: B6Ng01-123L14.g_66_502

seq1  GAATTCTCTTGGCTTTTCGCTGCTTCATTCCCACTGTGGGCATCTTAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTGGCTTTTCGCTGCTTCATTCCCACTGTGGGCATCTTAGTT  50

seq1  TGGGCCCTTAGAATGACAGCACTAATGCCAGCAAGATTTTGCTGAAAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCCCTTAGAATGACAGCACTAATGCCAGCAAGATTTTGCTGAAAGCA  100

seq1  CCCTGATATAGCTGTCTCTTGTGAGGCTATGCCAGTGCCTAGCAAACACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGATATAGCTGTCTCTTGTGAGGCTATGCCAGTGCCTAGCAAACACA  150

seq1  GAAGCGGATTCTCACAGTCATCTATAGGATGGAACACAGGGCCCCCAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCGGATTCTCACAGTCATCTATAGGATGGAACACAGGGCCCCCAATG  200

seq1  GAGGAGCTAGAGAAAGCACCCAAGGAGCTGAAGGGGTCTGCAACCCTATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGCTAGAGAAAGCACCCAAGGAGCTGAAGGGGTCTGCAACCCTATA  250

seq1  GGTAGAACAGCAATATGAACTAATTAGTACCCCACAGAACTGTGTCTCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGAACAGCAATATGAACTAATTAGTACCCCACAGAACTGTGTCTCTA  300

seq1  GCTGTATATGTAGCAGAAGATGGCCTAGTCAGCCATCAGTGGGAAGAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTATATGTAGCAGAAGATGGCCTAGTCAGCCATCAGTGGGAAGAGAG  350

seq1  GCCCCTTGGTCTTGCAAACTTTATATGCCCCAGTACAAGGGAACGCCAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCTTGGTCTTGCAAACTTTATATGCCCCAGTACAAGGGAACGCCAGG  400

seq1  GCCAAGAAGTGGGAGTGGGTGGGTAGGGGAGCAGGGC  437
      |||||||||||||||||||||||||||||||||||||
seq2  GCCAAGAAGTGGGAGTGGGTGGGTAGGGGAGCAGGGC  437