BAC Information

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BAC

Clone NameB6Ng01-124E14
Chromosome2 (Build37)
Map Location 84,324,591 - 84,468,011
singlet/doubletdoublet
Overlap geneLOC672763, Ctnnd1
Upstream geneZc3h15, Itgav, Dnmt3l-ps1, D430039N05Rik, Zswim2, LOC668096, LOC668100, LOC545432, LOC668107, LOC668113, LOC668115, LOC668119, LOC383725, Calcrl, Tfpi
Downstream gene2700094K13Rik, Txndc14, Med19, Zdhhc5, Clp1, Ypel4, Serping1, Ube2l6, Smtnl1, Timm10, Slc43a1, Rtn4rl2, Slc43a3, Prg2, Prg3, P2rx3, Ssrp1, Tnks1bp1, Agtrl1, LOC625033, Lrrc55, Olfr987, GA_x5J8B7W531T-1241080-1240524, Olfr988, GA_x5J8B7W531T-1286425-1285652, Olfr990-ps1, Olfr991-ps1, Olfr992, Olfr993, Olfr994, Olfr995, 4833423E24Rik, Olfr996, Olfr997-ps1, Olfr998, Olfr999-ps1, Olfr1000
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124E14.bB6Ng01-124E14.g
ACCDH927232DH927233
length1,095910
definitionDH927232|Mus musculus domesticus DNA, BAC clone: B6Ng01-124E14, 5' end.DH927233|Mus musculus domesticus DNA, BAC clone: B6Ng01-124E14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(84,466,901 - 84,468,011)(84,324,591 - 84,325,399)
sequence
gaattcaattgtgttctagatccgattaatttcatctactacttcacaaa
atagtttggggctgagacattaccatgaagtaatgtaattggaagattga
atctaactcttgaaacaacttaatacctcaccttgtagaacacactttat
ctcattcagtgttcacggcagcccagacttagaatggcctgttgctattg
ccatcacacagatgagaataaccagaacataagccaggactgggaccagc
cttgtgaattatcctgactcacacagccactgcttctcccttttaaacag
aaaatctatccatgcgtaaagacctaggagtgtgacctctttttctactt
agctatattgtcctcttagagtcaacttgaaagccaggatgacggagaag
tccagactgtgctttgtgactgacataggtccctcagtattttccctaac
ttcctttttaactccctgtatcaaattaaagttgtgggggcaaaaagtga
ccatttatggcatgatgacaaacacggtcatctgtggcagggagtgttgt
ttctctgtgccccatagtagtggtcgcctgggcttttattagcaagaaga
ttacagggtggaggctgccacagtggtaactgcagtacaggccctgttta
aaatcagtaactggaggagtctctcttgagctgggttctcttgatgtgga
aggttcataggtcaatgtacatagcagatgacggcaagtgtttaaaatga
agaaatagggataaaaaggaaacaattagaacaagccaggagtggtgata
aattcttatactccagtacttgagaagtagagacaggagaatcaggaatt
taagtcagcttaagctttatagtgagtttgaggccagcctgggagactgt
cacagacaaaacacacacacaaaaaacaacgtaataaagaaagacctttg
agtggccgtctggaatgtgggtagagtatgagaagaggcattgggatatg
gcgtgggctgagtgaaaccagtgtgataaatgaatgtggaactatggctg
gtaagaatacataggacgtcagctgttctcggacctagtgactga
gaattccagtactgaggaggtagagacaggatgccccctggatctcatgg
tccatccacctagacaactggataaactccaagccagagagagatcctgt
cctcaaaaacagaagaagaaaaagaaaaaggtttttaaactgcatgacac
tggaagaacaccacccaaggttgacctcttggcttccatacgaatgctca
tacaaccatatatccatgtacatgtacatgaatatataccaaaaaataag
gaaaacgtgaaatcacatgagaagtcaaggggtttgagcagaaaaaaatg
attttttttagtgtttttattctttgaaagtttcatacatgtatacagca
tattttactatcttcatttccaataccctctctcatacccctccctcttc
tgctgaagcccttcatcaccggaagctcccctttaacctttacgtctttt
tatgtttagttgcccactaaatgtcattatgcctgctcacacaagcatgt
aggatgatagctactggagcatgggcaatgtttcaatgggcacaccacta
agaaaagtgaccacctagccaccatggactgacttcctcaggaataggca
gggcctcgagcatcgcagcgtcgtggcccagccactatgaagtgttgacg
ggccagtcacgtgcagatgctctgtaggggagaggcggaggggaagcacc
gctgcgcgagtcggtgatcgcaatcgccatcttacattccgaagacatct
ttttgcggcacacccaccttttccctctgtctcttacattgttatcatcc
ttttgtccgtgttcctggagcctgggaggggtggtacaaatgtcctattt
agagtcaattattgcagtatccacttctttttgtagctttgaccgtttat
gagcctgtgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_84466901_84468011
seq2: B6Ng01-124E14.b_46_1140 (reverse)

seq1  TCAGTCACTAAGTCCGAGAACACGCTGACTGTCCCTAAATGTATCCTACC  50
      |||||||||| ||||||||||| |||||| ||||    |||||| ||  |
seq2  TCAGTCACTAGGTCCGAGAACA-GCTGAC-GTCC---TATGTATTCTTAC  45

seq1  CAGCCCTAGGCTCCCACAATCATTTATCAACCACTGTTCTCACTCAGCCC  100
      ||||| |||  | ||||| ||||||||||  ||||| | |||||||||||
seq2  CAGCCATAG--TTCCACATTCATTTATCA--CACTGGTTTCACTCAGCCC  91

seq1  AACGCCCAATATCCCAATGCCTCTTTCTCATACTCCTACCCACATTCCAG  150
       |||||  ||||||||||||||| |||||||||| |||||||||||||||
seq2  -ACGCC--ATATCCCAATGCCTC-TTCTCATACT-CTACCCACATTCCAG  136

seq1  ACGGCCACTCAAAGGTCTTTCTTTATTACGTTGTTTTTTGTGTGTGTGTT  200
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  ACGGCCACTCAAAGGTCTTTCTTTATTACGTTGTTTTTTGTGTGTGTG-T  185

seq1  TTTGTCTGTGACAGTCTCCCAGGCTGGCCTCAAACTCACTATAAAGCTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTGTGACAGTCTCCCAGGCTGGCCTCAAACTCACTATAAAGCTTA  235

seq1  AGCTGACCTTAAATTCCTGATTCTCCTGTCTCTACTTCTCAAGTACTGGA  300
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGA-CTTAAATTCCTGATTCTCCTGTCTCTACTTCTCAAGTACTGGA  284

seq1  GTATAAGAATTTATCACCACTCCTGGCTTGTTCTAATTGTTTCCTTTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAAGAATTTATCACCACTCCTGGCTTGTTCTAATTGTTTCCTTTTTA  334

seq1  TCCCTATTTCTTCATTTTAAACACTTGCCGTCATCTGCTATGTACATTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTATTTCTTCATTTTAAACACTTGCCGTCATCTGCTATGTACATTGA  384

seq1  CCTATGAACCTTCCACATCAAGAGAACCCAGCTCAAGAGAGACTCCTCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATGAACCTTCCACATCAAGAGAACCCAGCTCAAGAGAGACTCCTCCA  434

seq1  GTTACTGATTTTAAACAGGGCCTGTACTGCAGTTACCACTGTGGCAGCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTGATTTTAAACAGGGCCTGTACTGCAGTTACCACTGTGGCAGCCT  484

seq1  CCACCCTGTAATCTTCTTGCTAATAAAAGCCCAGGCGACCACTACTATGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCTGTAATCTTCTTGCTAATAAAAGCCCAGGCGACCACTACTATGG  534

seq1  GGCACAGAGAAACAACACTCCCTGCCACAGATGACCGTGTTTGTCATCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACAGAGAAACAACACTCCCTGCCACAGATGACCGTGTTTGTCATCAT  584

seq1  GCCATAAATGGTCACTTTTTGCCCCCACAACTTTAATTTGATACAGGGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATAAATGGTCACTTTTTGCCCCCACAACTTTAATTTGATACAGGGAG  634

seq1  TTAAAAAGGAAGTTAGGGAAAATACTGAGGGACCTATGTCAGTCACAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAGGAAGTTAGGGAAAATACTGAGGGACCTATGTCAGTCACAAAG  684

seq1  CACAGTCTGGACTTCTCCGTCATCCTGGCTTTCAAGTTGACTCTAAGAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTCTGGACTTCTCCGTCATCCTGGCTTTCAAGTTGACTCTAAGAGG  734

seq1  ACAATATAGCTAAGTAGAAAAAGAGGTCACACTCCTAGGTCTTTACGCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATATAGCTAAGTAGAAAAAGAGGTCACACTCCTAGGTCTTTACGCAT  784

seq1  GGATAGATTTTCTGTTTAAAAGGGAGAAGCAGTGGCTGTGTGAGTCAGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAGATTTTCTGTTTAAAAGGGAGAAGCAGTGGCTGTGTGAGTCAGGA  834

seq1  TAATTCACAAGGCTGGTCCCAGTCCTGGCTTATGTTCTGGTTATTCTCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCACAAGGCTGGTCCCAGTCCTGGCTTATGTTCTGGTTATTCTCAT  884

seq1  CTGTGTGATGGCAATAGCAACAGGCCATTCTAAGTCTGGGCTGCCGTGAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTGATGGCAATAGCAACAGGCCATTCTAAGTCTGGGCTGCCGTGAA  934

seq1  CACTGAATGAGATAAAGTGTGTTCTACAAGGTGAGGTATTAAGTTGTTTC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAATGAGATAAAGTGTGTTCTACAAGGTGAGGTATTAAGTTGTTTC  984

seq1  AAGAGTTAGATTCAATCTTCCAATTACATTACTTCATGGTAATGTCTCAG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTTAGATTCAATCTTCCAATTACATTACTTCATGGTAATGTCTCAG  1034

seq1  CCCCAAACTATTTTGTGAAGTAGTAGATGAAATTAATCGGATCTAGAACA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAAACTATTTTGTGAAGTAGTAGATGAAATTAATCGGATCTAGAACA  1084

seq1  CAATTGAATTC  1111
      |||||||||||
seq2  CAATTGAATTC  1095

seq1: chr2_84324591_84325399
seq2: B6Ng01-124E14.g_70_880

seq1  GAATTCCAGTACTGAGGAGGTAGAGACAGGATGCCCCCTGGATCTCATGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTACTGAGGAGGTAGAGACAGGATGCCCCCTGGATCTCATGG  50

seq1  TCCATCCACCTAGACAACTGGATAAACTCCAAGCCAGAGAGAGATCCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCCACCTAGACAACTGGATAAACTCCAAGCCAGAGAGAGATCCTGT  100

seq1  CCTCAAAAACAGAAGAAGAAAAAGAAAAAGGTTTTTAAACTGCATGACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAAAAACAGAAGAAGAAAAAGAAAAAGGTTTTTAAACTGCATGACAC  150

seq1  TGGAAGAACACCACCCAAGGTTGACCTCTTGGCTTCCATACGAATGCTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGAACACCACCCAAGGTTGACCTCTTGGCTTCCATACGAATGCTCA  200

seq1  TACAACCATATATCCATGTACATGTACATGAATATATACCAAAAAATAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAACCATATATCCATGTACATGTACATGAATATATACCAAAAAATAAG  250

seq1  GAAAACGTGAAATCACATGAGAAGTCAAGGGGTTTGAGCAGAAAAAAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACGTGAAATCACATGAGAAGTCAAGGGGTTTGAGCAGAAAAAAATG  300

seq1  ATTTTTTTTAGTGTTTTTATTCTTTGAAAGTTTCATACATGTATACAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTTAGTGTTTTTATTCTTTGAAAGTTTCATACATGTATACAGCA  350

seq1  TATTTTACTATCTTCATTTCCAATACCCTCTCTCATACCCCTCCCTCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTACTATCTTCATTTCCAATACCCTCTCTCATACCCCTCCCTCTTC  400

seq1  TGCTGAAGCCCTTCATCACCGGAAGCTCCCCTTTAACCTTTACGTCTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAAGCCCTTCATCACCGGAAGCTCCCCTTTAACCTTTACGTCTTTT  450

seq1  TATGTTTAGTTGCCCACTAAATGTCATTATGCCTGCTCACACAAGCATGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTTAGTTGCCCACTAAATGTCATTATGCCTGCTCACACAAGCATGT  500

seq1  AGGATGATAGCTACTGGAGCATGGGCAATGTTTCAATGGGCACACCACTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGATAGCTACTGGAGCATGGGCAATGTTTCAATGGGCACACCACTA  550

seq1  AGAAAAGTGACCACCTAGCCACCATGGACTGACTTCCTCAGGAATAGGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGTGACCACCTAGCCACCATGGACTGACTTCCTCAGGAATAGGCA  600

seq1  GGGCCTCGAGCATCGCAGCGTCGTGGCCCAGCCACTATGAAGTGTTGACG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTCGAGCATCGCAGCGTCGTGGCCCAGCCACTATGAAGTGTTGACG  650

seq1  GGCCAGTCACGTGCAGATGCTCTGTAGGGGAGAGGCGGAGGGGAAGCACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGTCACGTGCAGATGCTCTGTAGGGGAGAGGCGGAGGGGAAGCACC  700

seq1  GCTGCGCGAGTCGGTGATCGCAATCGCCATCTTACATTCCGAAGACATCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCGCGAGTCGGTGATCGCAATCGCCATCTTACATTCCGAAGACATCT  750

seq1  TTTTGCGGCACA-CCACCTTTT-CCTCTGTCTCTTACATTGTTATCATCC  798
      |||||||||||| ||||||||| |||||||||||||||||||||||||||
seq2  TTTTGCGGCACACCCACCTTTTCCCTCTGTCTCTTACATTGTTATCATCC  800

seq1  TTTTGTCCGTG  809
      |||||||||||
seq2  TTTTGTCCGTG  811