BAC Information

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BAC

Clone NameB6Ng01-125F20
Chromosome2 (Build37)
Map Location 156,440,652 - 156,635,459
singlet/doubletdoublet
Overlap geneDlgap4, Myl9, LOC433546
Upstream geneMyh7b, Trpc4ap, Edem2, Procr, Mmp24, Itgb4bp, 5530400B04Rik, 2410003P15Rik, Gdf5, Cep250, Ergic3, Fer1l4, Spag4, Cpne1, Rbm12, Nfs1, 2010100O12Rik, Rbm39, Phf20, Scand1, LOC632394, LOC628707, LOC669792, 2900097C17Rik, LOC668941, Epb4.1l1, 0610011L14Rik
Downstream geneTgif2, LOC100043677, 1110008F13Rik, Sla2, LOC100043880, Ndrg3, LOC668943, Dsn1, 9830001H06Rik, Gm1332, Samhd1, Rbl1, LOC100043882, 4922505G16Rik, Rpn2, Ghrh, LOC100043678, Manbal, Src, Blcap, Nnat, Ctnnbl1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-125F20.bB6Ng01-125F20.g
ACCDH928021DH928022
length846305
definitionDH928021|Mus musculus domesticus DNA, BAC clone: B6Ng01-125F20, 5' end.DH928022|Mus musculus domesticus DNA, BAC clone: B6Ng01-125F20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(156,634,901 - 156,635,459)(156,440,652 - 156,440,956)
sequence
gaattctgggacctaggtctccagtttatgcagtgtccttgggtggcccc
tagtggcaagatatggtaacactttgtgtttttgaggcagggtctcatgt
agccctggctgtctttgaactctttcttgctcctctcaggtactgggatt
aaaggtgtcttcctccacgtcctgcttagctgaattgaatgcgtctccat
tcgccagcaaatccagtatgtacttgtgcaccagatgtcttaattaggtt
ttactgctgtgaacagacaccatgaccaaggcaactcttataaggacaac
atttaattgggactgccttataggttcagaggttcagtccagtatcatca
tggtgggaatatggcagcatccagacaggtggaggcagagctgagagttc
tacatcttcatctgaaggcagctagtggaagattgacttctaggaagcta
ggacaagggtcttaaagcccaagcccacagtgacacacttactccaacaa
ggccacacctctaaatagtgccactccctgggctaagcacatacaaacca
tcacagcaggttttgtcgatacctttactttttttttaattactttattt
taaattaagtgcgcatgtgtgggtctgtgcacatgctgccagtgcctttg
gagggtagaggaggcagctgctcctggggctggagttagaggaattgtga
gtggctcaatgtgtatgggagatgggactcggattctggtctcttcattc
tggtcctcttcaatagtagtgtgttctctcaactgttgagccatctctca
gcctttctgatgcatttgccttttatttatttattttaatgggtat
ttccctcaggtggctacctctctccccttcctctggtatagaaaactgtg
ggctgcctgggccaagggtggtccgaggggcctgagccagactgttaagg
acagcgggactgggtggggccgcagagctggcttccgggctgatagccga
ggctcgggttggggggccatcctccccctcagctgggcttcagcgactgc
tcaacaagctccgagtatgttcccagtagcttctgacgatgctgtctgtg
cacgtggggcaggcgtgtgtgcctgtgtctgtattggggttggggtggga
tagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_156634901_156635459
seq2: B6Ng01-125F20.b_47_605 (reverse)

seq1  CTGCTGTGATGGTTTGTATGTGCTTAGCCCAGGGAGTGGCACTATTTAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGTGATGGTTTGTATGTGCTTAGCCCAGGGAGTGGCACTATTTAGA  50

seq1  GGTGTGGCCTTGTTGGAGTAAGTGTGTCACTGTGGGCTTGGGCTTTAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGGCCTTGTTGGAGTAAGTGTGTCACTGTGGGCTTGGGCTTTAAGA  100

seq1  CCCTTGTCCTAGCTTCCTAGAAGTCAATCTTCCACTAGCTGCCTTCAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGTCCTAGCTTCCTAGAAGTCAATCTTCCACTAGCTGCCTTCAGAT  150

seq1  GAAGATGTAGAACTCTCAGCTCTGCCTCCACCTGTCTGGATGCTGCCATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATGTAGAACTCTCAGCTCTGCCTCCACCTGTCTGGATGCTGCCATA  200

seq1  TTCCCACCATGATGATACTGGACTGAACCTCTGAACCTATAAGGCAGTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCACCATGATGATACTGGACTGAACCTCTGAACCTATAAGGCAGTCC  250

seq1  CAATTAAATGTTGTCCTTATAAGAGTTGCCTTGGTCATGGTGTCTGTTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTAAATGTTGTCCTTATAAGAGTTGCCTTGGTCATGGTGTCTGTTCA  300

seq1  CAGCAGTAAAACCTAATTAAGACATCTGGTGCACAAGTACATACTGGATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGTAAAACCTAATTAAGACATCTGGTGCACAAGTACATACTGGATT  350

seq1  TGCTGGCGAATGGAGACGCATTCAATTCAGCTAAGCAGGACGTGGAGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGCGAATGGAGACGCATTCAATTCAGCTAAGCAGGACGTGGAGGAA  400

seq1  GACACCTTTAATCCCAGTACCTGAGAGGAGCAAGAAAGAGTTCAAAGACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACCTTTAATCCCAGTACCTGAGAGGAGCAAGAAAGAGTTCAAAGACA  450

seq1  GCCAGGGCTACATGAGACCCTGCCTCAAAAACACAAAGTGTTACCATATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGGCTACATGAGACCCTGCCTCAAAAACACAAAGTGTTACCATATC  500

seq1  TTGCCACTAGGGGCCACCCAAGGACACTGCATAAACTGGAGACCTAGGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCACTAGGGGCCACCCAAGGACACTGCATAAACTGGAGACCTAGGTC  550

seq1  CCAGAATTC  559
      |||||||||
seq2  CCAGAATTC  559

seq1: chr2_156440652_156440956
seq2: B6Ng01-125F20.g_73_377

seq1  TTCCCTCAGGTGGCTACCTCTCTCCCCTTCCTCTGGTATAGAAAACTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTCAGGTGGCTACCTCTCTCCCCTTCCTCTGGTATAGAAAACTGTG  50

seq1  GGCTGCCTGGGCCAAGGGTGGTCCGAGGGGCCTGAGCCAGACTGTTAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCCTGGGCCAAGGGTGGTCCGAGGGGCCTGAGCCAGACTGTTAAGG  100

seq1  ACAGCGGGACTGGGTGGGGCCGCAGAGCTGGCTTCCGGGCTGATAGCCGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCGGGACTGGGTGGGGCCGCAGAGCTGGCTTCCGGGCTGATAGCCGA  150

seq1  GGCTCGGGTTGGGGGGCCATCCTCCCCCTCAGCTGGGCTTCAGCGACTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCGGGTTGGGGGGCCATCCTCCCCCTCAGCTGGGCTTCAGCGACTGC  200

seq1  TCAACAAGCTCCGAGTATGTTCCCAGTAGCTTCTGACGATGCTGTCTGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACAAGCTCCGAGTATGTTCCCAGTAGCTTCTGACGATGCTGTCTGTG  250

seq1  CACGTGGGGCAGGCGTGTGTGCCTGTGTCTGTATTGGGGTTGGGGTGGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTGGGGCAGGCGTGTGTGCCTGTGTCTGTATTGGGGTTGGGGTGGGA  300

seq1  TAGAG  305
      |||||
seq2  TAGAG  305