BAC Information

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BAC

Clone NameB6Ng01-128P18
Chromosome2 (Build37)10 (Build37)
Map Location 142,776,522 - 142,777,22038,596,544 - 38,597,106
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128P18.bB6Ng01-128P18.g
ACCDH930690DH930691
length7161,040
definitionDH930690|Mus musculus domesticus DNA, BAC clone: B6Ng01-128P18, 5' end.DH930691|Mus musculus domesticus DNA, BAC clone: B6Ng01-128P18, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(142,776,522 - 142,777,220)(38,596,544 - 38,597,106)
sequence
gaattctttgttctgttctgagccccattttttaatggggttatttgatt
ttccgaagtccaccttcctgagttctttatatatgttggatattagtccc
ctatctgattttcgataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcacaaactttagagttgca
ttacgtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcacgaatttttcccctctgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctgattttatgtgaagttccttga
tccccttagatttgacctaaggacaaggagataaggatggatcgattcgc
attcttctacatgataacaaccagttgtgccccaccaattgttgaaaatg
ctgtctttcttccactggatggtgttaactcccttgtcgaatatcaaccg
accataggtgtgtgggttcatttctgggacaacaattctattccagtggt
ctacttgtgtgtcgctataccagtacggagcactttttatcacaactgct
ctgtgccaaagctataggtctggcatggtgattccgccagaatttcttta
atctttgataagactttttgctatcctagggtatttattattcctcacta
atttgcaaattgctcc
gaattcttcttgttgtagatgaagcattcctaggcctccgccctagtcaa
tcatgtatatccaccttgggattccctacccactccccaaatctataacc
acccttcatcaccctgaataaaattgagttgcctcactgaagcagacctt
agaagtcagtcaacacttccgtattcccagctgtcctgaaccggtccctt
gcctctgcccactttgtcctcaataaccggaggccaccagcccatggggc
tggtgggaaggatcacttgggtctcttaaaggagcaaaaatgagccccct
gagctgggggcaggggttgcatttgccaaagcactaactaaagagctctg
caaaccgcatactcgaatcacctggggatcttcaagaatattgaggttct
ggttagaccacaggccagagaagttgaactctgagtctaggatgcaaaca
ggatttttcttgttgctgctcaggcaattccaaacactgattacctggag
aaactaggtctgcaagttctttgcttccagtgcttccagggcaacatggc
ttattattaacaaaaacacaaagagcgttgaggaggacatagttcataat
ttgggaaagctttttcccatacagaactagagtgtaaatatagtgttttt
aggtttcttagacttgaagcaaaattgagcttaccagggtaaatgcttgt
atagcacaaagcaaacaaattccacaacttttgatgaaagatccaacagt
ggtcagtgagcagtttcatatataactttcatgtcatgaaaactacatct
atttagacttttatagaccgtttaaaatatacagcctaatcttcatagta
gttcatacaaaattgacagtaggctagatttgggccttgtgggctaatct
ttttggcgtttgataaagatcatcattattacctccatccaaagacaagg
ccagaatggacgtctagttaaacagccactaccttacctactttgaaaaa
tcacagttttcttcaaaggacagcccgcaaatgtaaatac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776522_142777220
seq2: B6Ng01-128P18.b_64_761 (reverse)

seq1  GGAGCAATTTGCAAATTCATCTGGAATAACAAAAAACCTAGGATAGCAAA  50
      |||||||||||||||||  |  ||||||| ||| | ||||||||||||||
seq2  GGAGCAATTTGCAAATTAGTGAGGAATAATAAATACCCTAGGATAGCAAA  50

seq1  AAGTCTTCTCAAGGATAAAAGAACCTCTGGTGGAATCACCATGCCTGACC  100
      ||||||| |||| ||| ||||||  ||||| |||||||||||||| ||||
seq2  AAGTCTTATCAAAGATTAAAGAAATTCTGGCGGAATCACCATGCCAGACC  100

seq1  TAAAGCTTTACTACAGAGCAATTGTGATAAAAACTGCATGGTACTGGTAT  150
      || ||||||   |||||||| |||||||||||| |||   ||||||||||
seq2  TATAGCTTTGGCACAGAGCAGTTGTGATAAAAAGTGCTCCGTACTGGTAT  150

seq1  AGAGACAGACAAGTAGACCAATGGAATAGAATTGAAGACCCAGAAATGAA  200
      || |||| |||||||||||| |||||||||||||  | ||||||||||||
seq2  AGCGACACACAAGTAGACCACTGGAATAGAATTGTTGTCCCAGAAATGAA  200

seq1  CCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCC  250
      |||||||||||||||||  ||||| ||||||||||||| ||| |||||||
seq2  CCCACACACCTATGGTCGGTTGATATTCGACAAGGGAGTTAACACCATCC  250

seq1  AGAGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTG  300
      || |||||||||||||||||||||||||||||||  ||||||||||||||
seq2  AGTGGAAGAAAGACAGCATTTTCAACAATTGGTG-GGGCACAACTGGTTG  299

seq1  TTATCATGTAGAAGAATGGGAATCGATCCATACTTATCTCCTTGTACTAA  350
      |||||||||||||||||| |||||||||||| ||||||||||||| || |
seq2  TTATCATGTAGAAGAATGCGAATCGATCCATCCTTATCTCCTTGTCCTTA  349

seq1  GGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGA  400
      ||||||||||||| ||||||||||||||||||||||| ||||||||||||
seq2  GGTCAAATCTAAGGGGATCAAGGAACTTCACATAAAATCAGAGACACTGA  399

seq1  AACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCAGAGGG  449

seq1  GACAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAAT  500
      || |||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATTCGTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAAT  499

seq1  TGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACA  550
      ||||||||||||| ||||| ||||| ||||||| ||||||||||||||||
seq2  TGACAAATGGGACGTAATGCAACTCTAAAGTTTGTGCAAGGCAAAAGACA  549

seq1  CCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTACC  599

seq1  TATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCAA  650
      ||||  ||||||||||||||||||||||||||||||||||||||||||| 
seq2  TATCGAAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCAG  649

seq1  GAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCA  699
      ||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GAAGGTGGACTTCGGAAAATCAAATAACCCCATTAAAAAATGGGGCTCA  698

seq1: chr10_38596544_38597106
seq2: B6Ng01-128P18.g_549_1107 (reverse)

seq1  GTATTTACATCTGCGGACTGTCC-TTGGAGAAAACTGTGATTTTTCAAAG  49
      |||||||||| ||||| |||||| ||| ||||||||||||||||||||||
seq2  GTATTTACATTTGCGGGCTGTCCTTTGAAGAAAACTGTGATTTTTCAAAG  50

seq1  TTAGGTAAGGTAGTTGACTTTTTTACTTAGATGTCCATTTCTTGCCTTGT  99
       |||||||||||| || || ||| || |||| ||||| |||| |||||||
seq2  -TAGGTAAGGTAG-TGGCTGTTTAAC-TAGACGTCCA-TTCTGGCCTTGT  96

seq1  CTTTGGATTGGAGGTAAT-ATGGTTATCTATATCAAACGCCAAAAAGCTT  148
      ||||||| |||||||||| ||| | |||| |||||||||||||||||  |
seq2  CTTTGGA-TGGAGGTAATAATGATGATCTTTATCAAACGCCAAAAAG-AT  144

seq1  TAGCCCACAAAGCCCAAATCTAGCCTACTGCCTAATTTTGTATGAACTAC  198
      |||||||||| ||||||||||||||||||| | |||||||||||||||||
seq2  TAGCCCACAAGGCCCAAATCTAGCCTACTGTC-AATTTTGTATGAACTAC  193

seq1  AAGGTAAGAATAGGCTGTATATTTTAAAATGGTCTTTAAAAGTCAAAATA  248
       | | |||| ||||||||||||||| ||| ||||| |||||||| |||||
seq2  TATG-AAGATTAGGCTGTATATTTT-AAACGGTCTATAAAAGTCTAAATA  241

seq1  GATGTAGTTTTCATGACATGAAAGTTATATATGAAACTGCTCACTGACCA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTAGTTTTCATGACATGAAAGTTATATATGAAACTGCTCACTGACCA  291

seq1  CTGTTTGATCTTTCATCAAAAGTTGTGGAATTTGTTTGCTTTCTGCTATA  348
      ||||| |||||||||||||||||||||||||||||||||||| |||||||
seq2  CTGTTGGATCTTTCATCAAAAGTTGTGGAATTTGTTTGCTTTGTGCTATA  341

seq1  CAAGCATTTA-CCTGGTAAGCTCAATTTTGCTTCAAGTCTTATGAAACCT  397
      |||||||||| |||||||||||||||||||||||||||| || |||||||
seq2  CAAGCATTTACCCTGGTAAGCTCAATTTTGCTTCAAGTC-TAAGAAACCT  390

seq1  -AAAACACTATATTTACTCTCTAGTTCTGTATGGG-AAAAGC-TTGCCAA  444
       |||||||||||||||| ||||||||||||||||| |||||| || ||||
seq2  AAAAACACTATATTTACACTCTAGTTCTGTATGGGAAAAAGCTTTCCCAA  440

seq1  ATTCTGAACTATGTCCTCCTTAACGCTCCTTGTGTTCTTCTTAATAATAA  494
      ||| |||||||||||||||| ||||||| ||||||| || ||||||||||
seq2  ATTATGAACTATGTCCTCCTCAACGCTCTTTGTGTTTTTGTTAATAATAA  490

seq1  ACCATGTTGCCCTGGAAGCACTGGAAGCAAAGAACTTGCAGACCTAGTTT  544
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGTTGCCCTGGAAGCACTGGAAGCAAAGAACTTGCAGACCTAGTTT  540

seq1  CTCCAGGTAATCAGTGTTT  563
      |||||||||||||||||||
seq2  CTCCAGGTAATCAGTGTTT  559