BAC Information

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BAC

Clone NameB6Ng01-129A24
Chromosome2 (Build37)4 (Build37)
Map Location 142,776,636 - 142,777,6986,369,060 - 6,369,929
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-129A24.bB6Ng01-129A24.g
ACCDH930748DH930749
length679869
definitionDH930748|Mus musculus domesticus DNA, BAC clone: B6Ng01-129A24, 5' end.DH930749|Mus musculus domesticus DNA, BAC clone: B6Ng01-129A24, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(142,776,636 - 142,777,698)(6,369,060 - 6,369,929)
sequence
gaattctttgtttagctctgtacctcatttttttatggggttatttgatt
ttctggagtccagcttcttgagttctttgtatatgttgaatattagtccc
ctatcagatttatgattggtaaagatcctctcccaatctgttggtggcct
ttttgtcttattgacagtatcttttgccttacagaagctttgcaattttt
tgaggtctcatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgctcatatttttgaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtggagttccttga
tccatttagtacacggagataagaatggaccaaatcgcattcttctacat
gataaccaccagttgtgccagcaccatttcttgaaagtgctgtctttttt
tccatgggatggttttagctctcttgtcaaagatcaagtgaccataggtg
tgtgggttcatttctgggtcttcaattctatctcattggtctacttgtct
gttactataccagtaccatacagtttttatcacaattgctctgtagtata
gctttaggtcaggcattgtgattccaccagaggttcttttatcattgaga
atagcttttgctattctagggatttttgt
gaattcagatggactggggaacatttcaggccatgcgctggcaagtttag
cttatgactaattaaaaaaataaataaataaactggagactaattcgaat
ttatgactaatttttgtttagaaattttaaactggaggacaggtcaataa
aacttagatggtaaaactggttcctgtattcattaattttttttcttttc
cattttttattaggtatttagctcatttacatttccaatgctataccaaa
agtcccccatagccacccacccccactcccctacccacccactccccctt
tttggccctggcgttcccctgtactggggcatataaagtttgcgtgtcca
atgggcctctctttccagtgatggccgactaggccatcttttgatacata
tgcagctagagtcaagagctccggggtactggttagatcataatgttgtt
tcacctataggattgcagatatctttagctccgtgggtactgtctctagc
tcctccattgggagccctgtgatccatccattatctgactgtgagcatat
tcatgaattttaatcttgtgagtaagtcctttggggcagggtgtttattg
agtgcaggacattatgagtttggttatcactctgccccttttgtctgtga
cctatccttcagaccctgcattgtctccggcacttcagtttgtatgtatc
tgcctgattgagggcttgcgttttcaaatcaaagccacctgtgtggcagt
gacttctgcacagtgacccatgcagggtccgcgtttggggagacctgccc
agtcaatcgctttccgatagtgatgccatctgcggaaacaatgatctcag
tgcggctaattctacatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776636_142777698
seq2: B6Ng01-129A24.b_47_638 (reverse)

seq1  AGAGCAATTGTGATAAAAACTGCATGGTACTGGTATAGAGACAGACAAGT  50
      |||||||||||||||||||||| |||||||||||||||  ||||||||||
seq2  AGAGCAATTGTGATAAAAACTGTATGGTACTGGTATAGTAACAGACAAGT  50

seq1  AGACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCACACACCTATG  100
      |||||||||  |||||||||||||||||||||||||||||||||||||||
seq2  AGACCAATGAGATAGAATTGAAGACCCAGAAATGAACCCACACACCTATG  100

seq1  GTCACTTGATCTTCGACAAGGGAGCTAAAACCAT-CCAGAGGAAGAAAGA  149
      ||||||||||||| |||||| ||||||||||||| |||  | || |||||
seq2  GTCACTTGATCTTTGACAAGAGAGCTAAAACCATCCCATGGAAAAAAAGA  150

seq1  CAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCATGTAGAA  199
      ||||| |||||| || ||||||||||||||||||| ||||||||||||||
seq2  CAGCACTTTCAAGAAATGGTGCTGGCACAACTGGTGGTTATCATGTAGAA  200

seq1  GAATGGGAATCGATCCATACTTATCTCCTTGTACTAAGGTCAAATCTAAG  249
      ||||| || | | ||||| ||||||||| ||||            |||| 
seq2  GAATGCGATTTGGTCCATTCTTATCTCCGTGTA------------CTAAA  238

seq1  TGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACTTATAGAGGA  299
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TGGATCAAGGAACTCCACATAAAACCAGAGACACTGAAACTTATAGAGGA  288

seq1  GAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGACAAATTCCTGA  349
      ||||||||||||||||||  || ||||| |||||||||| ||||||||||
seq2  GAAAGTGGGGAAAAGCCTCAAAAATATGAGCACAGGGGAAAAATTCCTGA  338

seq1  ACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAAATGGGAC  399
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAAATGAGAC  388

seq1  CTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGTCAATAAGAC  449
      || |  ||| | ||||| ||||| ||||||||||| || |||||||||||
seq2  CTCAAAAAATTGCAAAGCTTCTGTAAGGCAAAAGATACTGTCAATAAGAC  438

seq1  AAAAAGACCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAG  499
      |||||| ||||||||||||||||| |||||||||||| ||| |||||| |
seq2  AAAAAGGCCACCAACAGATTGGGAGAGGATCTTTACCAATCATAAATCTG  488

seq1  ATAGGGGACTAATATCCAACATATATAAAGAACTCAAGAAGGTGGACTTC  549
      ||||||||||||||| ||||||||| ||||||||||||||| |||||| |
seq2  ATAGGGGACTAATATTCAACATATACAAAGAACTCAAGAAGCTGGACTCC  538

seq1  AGAAAATCAAATAACCCCATTAAAAAATGGGGCTCACAAAACCATCCAGT  599
      |||||||||||||||||||| |||||||| ||   ||| | | |  ||  
seq2  AGAAAATCAAATAACCCCATAAAAAAATGAGG--TACAGAGCTAAACA--  584

seq1  GGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTA  649
        |||||                                           
seq2  --AAGAATTC----------------------------------------  592

seq1  TCATGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTGTACTAAGGT  699
                                                        
seq2  --------------------------------------------------  592

seq1  CAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAAC  749
                                                        
seq2  --------------------------------------------------  592

seq1  TTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGAA  799
                                                        
seq2  --------------------------------------------------  592

seq1  AAATTCCTGAACAGAAGAGCAATGGCTTGTGCTGTAAGATCGAGAATTGA  849
                                                        
seq2  --------------------------------------------------  592

seq1  CAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACTG  899
                                                        
seq2  --------------------------------------------------  592

seq1  TCTATAAGACAAAAAGACCACCAACAGACTGGGAAAGGATCTTTACCTAT  949
                                                        
seq2  --------------------------------------------------  592

seq1  CCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCAAGAA  999
                                                        
seq2  --------------------------------------------------  592

seq1  GGTGGACCTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAAC  1049
                                                        
seq2  --------------------------------------------------  592

seq1  TGAACAAAGAATTC  1063
                    
seq2  --------------  592

seq1: chr4_6369060_6369929
seq2: B6Ng01-129A24.g_64_932 (reverse)

seq1  AGATGGGAGAATTAGCCGCACAGAAATCATTGTTTCCGGAGATGGAATCA  50
      |||| | |||||||||||||| || ||||||||||||| |||||| ||||
seq2  AGAT-GTAGAATTAGCCGCACTGAGATCATTGTTTCCGCAGATGGCATCA  49

seq1  CTTATCAGAAAGCCAATGACAGAGCAGGACTTCCCCAAACGCGGACCCTG  100
      | |||| |||||| | |||| | ||||| | |||||||||||||||||||
seq2  C-TATCGGAAAGCGATTGACTGGGCAGGTC-TCCCCAAACGCGGACCCTG  97

seq1  CA-GGGTCACTGTGCAGAAGTCACTCCCACACAGGCGGCTTCTGATATGA  149
      || |||||||||||||||||||||| ||||||||| ||||| |||| |||
seq2  CATGGGTCACTGTGCAGAAGTCACTGCCACACAGGTGGCTT-TGATTTGA  146

seq1  AAACACAAG-CCTCAAACAGGCATAAACATACAAACTGAAGTACCAGAGA  198
      |||| |||| |||||| |||||| | |||||||||||||||| || ||||
seq2  AAACGCAAGCCCTCAATCAGGCAGATACATACAAACTGAAGTGCCGGAGA  196

seq1  CAATGCAGGGTCAGAAGGAAAGGTCACAGACAAAAGGGGCAGAGTGATAA  248
      |||||||||||| |||||| ||||||||||||||||||||||||||||||
seq2  CAATGCAGGGTCTGAAGGATAGGTCACAGACAAAAGGGGCAGAGTGATAA  246

seq1  CCAAACTCATAATGTCCTGCACTCAA-AAACACCCTGCCCCAAAGGACTG  297
      |||||||||||||||||||||||||| |||||||||||||||||||||| 
seq2  CCAAACTCATAATGTCCTGCACTCAATAAACACCCTGCCCCAAAGGACTT  296

seq1  ACTCACAAGATTAAAATTAATGAATATGCTCACAGTCAGCTAATGGATGG  347
      |||||||||||||||||| |||||||||||||||||||| ||||||||||
seq2  ACTCACAAGATTAAAATTCATGAATATGCTCACAGTCAGATAATGGATGG  346

seq1  ATCACAGGGCTCCCAATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAA  397
      ||||||||||||||||||||||||||||||| |||||||| |||||||||
seq2  ATCACAGGGCTCCCAATGGAGGAGCTAGAGACAGTACCCACGGAGCTAAA  396

seq1  GGGATCTGCAATCCTATAGGTGAAACAACATTATGAACTAACCAGTACCC  447
      |  ||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GATATCTGCAATCCTATAGGTGAAACAACATTATGATCTAACCAGTACCC  446

seq1  CGGAGCTCTTGACTCTAGCTGCATATGTATCAAAAGATGGCCTAGTCGGC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAGCTCTTGACTCTAGCTGCATATGTATCAAAAGATGGCCTAGTCGGC  496

seq1  CATCACTGGAAAGAGAGGCCCATTGGACACGCAAACTTTATATGCCCCAG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACTGGAAAGAGAGGCCCATTGGACACGCAAACTTTATATGCCCCAG  546

seq1  TACAGGGGAACGCCAGGGCCAAAAAGGGGGAGTGGGTGGGTAGGGGAGTG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGGGAACGCCAGGGCCAAAAAGGGGGAGTGGGTGGGTAGGGGAGTG  596

seq1  GGGGTGGGTGGCTATGGGGGACTTTTGGTATAGCATTGGAAATGTAAATG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTGGGTGGCTATGGGGGACTTTTGGTATAGCATTGGAAATGTAAATG  646

seq1  AGCTAAATACCTAATAAAAAATGGAAAAGAAAAAAAATTAATGAATACAG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAAATACCTAATAAAAAATGGAAAAGAAAAAAAATTAATGAATACAG  696

seq1  GAACCAGTTTTACCATCTAAGTTTTATTGACCTGTCCTCCAGTTTAAAAT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCAGTTTTACCATCTAAGTTTTATTGACCTGTCCTCCAGTTTAAAAT  746

seq1  TTCTAAACAAAAATTAGTCATAAATTCGAATTAGTCTCCAGTTTATTTAT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAACAAAAATTAGTCATAAATTCGAATTAGTCTCCAGTTTATTTAT  796

seq1  TTATTTTTTTAATTAGTCATAAGCTAAACTTGCCAGCGCATGGCCTGAAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTTTAATTAGTCATAAGCTAAACTTGCCAGCGCATGGCCTGAAA  846

seq1  TGTTCCCCAGTCCATCTGAATTC  870
      |||||||||||||||||||||||
seq2  TGTTCCCCAGTCCATCTGAATTC  869